BLASTX 7.6.2
Query= RU59863 /QuerySize=314
(313 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_0264... 107 4e-022
gi|150005847|ref|YP_001300591.1| OmpA family outer membrane prot... 99 8e-020
gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_0205... 86 9e-016
gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein ... 80 3e-014
gi|150005846|ref|YP_001300590.1| hypothetical protein BVU_3342 [... 77 4e-013
>gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_02644 [Bacteroides
dorei DSM 17855]
Length = 243
Score = 107 bits (265), Expect = 4e-022
Identities = 53/53 (100%)
Frame = -1
Query: 160 MNMIMKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 2
MNMIMKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG
Sbjct: 1 MNMIMKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 53
>gi|150005847|ref|YP_001300591.1| OmpA family outer membrane protein
[Bacteroides vulgatus ATCC 8482]
Length = 239
Score = 99 bits (245), Expect = 8e-020
Identities = 49/49 (100%)
Frame = -1
Query: 148 MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 2
MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG
Sbjct: 1 MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 49
>gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_02054 [Bacteroides
coprocola DSM 17136]
Length = 239
Score = 86 bits (210), Expect = 9e-016
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = -1
Query: 148 MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 2
MKKT MA+LLSA LVFSGCG++NNTAKGG+IGGG GAALGA+IGGIAG
Sbjct: 1 MKKTSFMAILLSACLVFSGCGSLNNTAKGGMIGGGSGAALGALIGGIAG 49
>gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein [Bacteroides
fragilis YCH46]
Length = 224
Score = 80 bits (197), Expect = 3e-014
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = -1
Query: 148 MKKTKIMALLLSATLVFSGCGNMNNTAKGGLIGGGGGAALGAIIGGIAG 2
MKK K MAL LS LVF CG+MNNTAKGG+IGGG GAALGAIIGGIAG
Sbjct: 1 MKKIKFMALFLSMALVFGSCGSMNNTAKGGVIGGGSGAALGAIIGGIAG 49
>gi|150005846|ref|YP_001300590.1| hypothetical protein BVU_3342 [Bacteroides
vulgatus ATCC 8482]
Length = 447
Score = 77 bits (187), Expect = 4e-013
Identities = 35/37 (94%)
Frame = -1
Query: 310 GFAGIWWSISITSTMKGIICLIWFMLIKKKALNYQAV 200
G GIWWSISITSTMKGIICLIWFMLIKKKALNYQAV
Sbjct: 411 GLPGIWWSISITSTMKGIICLIWFMLIKKKALNYQAV 447
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,644,698,401
Number of Sequences: 7387702
Number of Extensions: 257644698401
Number of Successful Extensions: 141677024
Number of sequences better than 0.0: 0
|