BLASTX 7.6.2
Query= RU60247 /QuerySize=355
(354 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157345350|emb|CAO14648.1| unnamed protein product [Vitis vini... 127 2e-028
gi|18396541|ref|NP_566205.1| Ku70-binding family protein [Arabid... 113 5e-024
gi|116794410|gb|ABK27134.1| unknown [Picea sitchensis] 102 6e-021
gi|194701504|gb|ACF84836.1| unknown [Zea mays] 65 1e-009
gi|168005054|ref|XP_001755226.1| predicted protein [Physcomitrel... 64 3e-009
>gi|157345350|emb|CAO14648.1| unnamed protein product [Vitis vinifera]
Length = 195
Score = 127 bits (319), Expect = 2e-028
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +3
Query: 123 NGGKTVNECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIKAVHCEKKIAGGYTRGGGI 302
NGG TV ECE MI++SLRTPMVKFL E+LEKSGC IGD FIKA++C K++GGY RG GI
Sbjct: 19 NGGMTVKECEQMIQKSLRTPMVKFLRENLEKSGCAIGDKFIKAIYCNTKVSGGYARGEGI 78
Query: 303 MVCSNHMNMQDEVNQVV 353
+VCSNHMN+QDEVNQVV
Sbjct: 79 VVCSNHMNIQDEVNQVV 95
>gi|18396541|ref|NP_566205.1| Ku70-binding family protein [Arabidopsis
thaliana]
Length = 194
Score = 113 bits (281), Expect = 5e-024
Identities = 49/75 (65%), Positives = 63/75 (84%)
Frame = +3
Query: 129 GKTVNECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIKAVHCEKKIAGGYTRGGGIMV 308
GK+++EC+DMIRRS R P+VKFL+E +EKSGC +GD F+KAV C +AGGYT+G GI V
Sbjct: 20 GKSIDECQDMIRRSFRNPIVKFLMEQMEKSGCRVGDNFVKAVVCTGPVAGGYTKGRGITV 79
Query: 309 CSNHMNMQDEVNQVV 353
CSN++ +QDEVNQVV
Sbjct: 80 CSNYLTIQDEVNQVV 94
>gi|116794410|gb|ABK27134.1| unknown [Picea sitchensis]
Length = 197
Score = 102 bits (254), Expect = 6e-021
Identities = 45/75 (60%), Positives = 57/75 (76%)
Frame = +3
Query: 129 GKTVNECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIKAVHCEKKIAGGYTRGGGIMV 308
G T ECE MI++S R+P VKFL EHLEK+GC + F KA+ C+K+I+GGY R GI+V
Sbjct: 23 GTTKEECERMIQKSFRSPTVKFLREHLEKAGCSVNRNFFKAIECDKQISGGYLREEGILV 82
Query: 309 CSNHMNMQDEVNQVV 353
CSNHM QDEV+QV+
Sbjct: 83 CSNHMTFQDEVDQVI 97
>gi|194701504|gb|ACF84836.1| unknown [Zea mays]
Length = 201
Score = 65 bits (157), Expect = 1e-009
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 144 ECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDGFIKAVHCEKKIAGGYTRGGGIMVCSNHM 323
EC + IR +L+ P V+FL E +E +GC + I+A C AGGY GI VC NHM
Sbjct: 34 ECVEGIRSALKHPTVRFLRERMESAGCLVWPRLIRAATCSS--AGGYASQQGIQVCCNHM 91
Query: 324 NMQDEVNQVV 353
QDE+ QV+
Sbjct: 92 TCQDEITQVM 101
>gi|168005054|ref|XP_001755226.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 196
Score = 64 bits (154), Expect = 3e-009
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 129 GKTVNECEDMIRRSL-RTPMVKFLLEHLEKSGCGIGDGFIKAVHCEKKIAGGYTRGGGIM 305
G T C+ MI RSL R VKF+ E L ++GC + D F K C + GG+ + GI+
Sbjct: 15 GTTPEHCQQMINRSLSRNSTVKFVREALTEAGCPVADKFFKPERCSIQAGGGFKQDEGIV 74
Query: 306 VCSNHMNMQDEVN 344
+CSN++ QDEV+
Sbjct: 75 ICSNNVTHQDEVD 87
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,644,698,401
Number of Sequences: 7387702
Number of Extensions: 257644698401
Number of Successful Extensions: 141677024
Number of sequences better than 0.0: 0
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