BLASTX 7.6.2
Query= RU60560 /QuerySize=216
(215 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|12643807|sp|Q9LX33.1|PFTA_ARATH Protein farnesyltransferase/g... 78 2e-013
gi|116791645|gb|ABK26054.1| unknown [Picea sitchensis] 77 3e-013
gi|18411158|ref|NP_567084.1| FTA (FARNESYLTRANSFERASE A); protei... 76 6e-013
gi|3142698|gb|AAC61853.1| protein farnesyltransferase subunit A ... 76 6e-013
gi|115480131|ref|NP_001063659.1| Os09g0514400 [Oryza sativa (jap... 75 2e-012
>gi|12643807|sp|Q9LX33.1|PFTA_ARATH Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
(CAAX farnesyltransferase subunit alpha) (Ras proteins
prenyltransferase alpha) (FTase-alpha) (Type I protein
geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha)
Length = 340
Score = 78 bits (190), Expect = 2e-013
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Frame = -2
Query: 175 GREMSSSSSDEERRWVPLRSRPEFSDVIPVEQDDGPNPVVPITYKEEFRETMDYFRAL 2
G E + + DE VPL R E+SDV+P+ QDDGPNPVVPI YKEEFRETMDYFRA+
Sbjct: 9 GSESGNMNFDET---VPLSQRLEWSDVVPLTQDDGPNPVVPIAYKEEFRETMDYFRAI 63
>gi|116791645|gb|ABK26054.1| unknown [Picea sitchensis]
Length = 332
Score = 77 bits (188), Expect = 3e-013
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -2
Query: 166 MSSSSSDEERRWVPLRSRPEFSDVIPVEQDDGPNPVVPITYKEEFRETMDYFRAL 2
MSSS DEE VPL R E+SDV P+ QDDGP+PVV I Y +EFRETMDYFRA+
Sbjct: 1 MSSSEDDEEEVRVPLSQRQEWSDVEPIPQDDGPDPVVSIAYTDEFRETMDYFRAV 55
>gi|18411158|ref|NP_567084.1| FTA (FARNESYLTRANSFERASE A); protein
prenyltransferase [Arabidopsis thaliana]
Length = 326
Score = 76 bits (186), Expect = 6e-013
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -2
Query: 130 VPLRSRPEFSDVIPVEQDDGPNPVVPITYKEEFRETMDYFRAL 2
VPL R E+SDV+P+ QDDGPNPVVPI YKEEFRETMDYFRA+
Sbjct: 7 VPLSQRLEWSDVVPLTQDDGPNPVVPIAYKEEFRETMDYFRAI 49
>gi|3142698|gb|AAC61853.1| protein farnesyltransferase subunit A [Arabidopsis
thaliana]
Length = 326
Score = 76 bits (186), Expect = 6e-013
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -2
Query: 130 VPLRSRPEFSDVIPVEQDDGPNPVVPITYKEEFRETMDYFRAL 2
VPL R E+SDV+P+ QDDGPNPVVPI YKEEFRETMDYFRA+
Sbjct: 7 VPLSQRLEWSDVVPLTQDDGPNPVVPIAYKEEFRETMDYFRAI 49
>gi|115480131|ref|NP_001063659.1| Os09g0514400 [Oryza sativa (japonica
cultivar-group)]
Length = 339
Score = 75 bits (182), Expect = 2e-012
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -2
Query: 163 SSSSSDEERRWVPLRSRPEFSDVIPVEQDDGPNPVVPITYKEEFRETMDYFRAL 2
S+SS W+P RPE +DV+PV QDDGP+PVV I Y++EFRE MDYFRAL
Sbjct: 5 STSSEGASDEWLPPSRRPELADVVPVTQDDGPHPVVAIAYRDEFREVMDYFRAL 58
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,287,004,385
Number of Sequences: 7387702
Number of Extensions: 264287004385
Number of Successful Extensions: 149960990
Number of sequences better than 0.0: 0
|