BLASTX 7.6.2
Query= RU60872 /QuerySize=299
(298 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157338800|emb|CAO42151.1| unnamed protein product [Vitis vini... 129 7e-029
gi|4099833|gb|AAD00694.1| bifunctional nuclease [Zinnia elegans] 128 1e-028
gi|15221343|ref|NP_176996.1| ENDO 2 (ENDONUCLEASE 2); T/G mismat... 119 9e-026
gi|21554516|gb|AAM63596.1| putative bifunctional nuclease [Arabi... 119 9e-026
gi|195620056|gb|ACG31858.1| unknown [Zea mays] 116 8e-025
>gi|157338800|emb|CAO42151.1| unnamed protein product [Vitis vinifera]
Length = 285
Score = 129 bits (323), Expect = 7e-029
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = +1
Query: 52 LLLLLLFPVIHGWGIEGHTTVCRIAQSRLSDAAADAVKQLLPKYAENDLGTVCIWADRVK 231
+ L+ L V HGWG +GH T+CRIAQSRLSD AADAVK+LLP A++DL ++C WADRVK
Sbjct: 12 MALMSLCSVSHGWGTDGHFTICRIAQSRLSDVAADAVKELLPASADDDLASLCSWADRVK 71
Query: 232 FRYHWSSALHYIDTPDNLCTYQ 297
FRYHWSS LH+++TPD+LCTYQ
Sbjct: 72 FRYHWSSPLHFLNTPDDLCTYQ 93
>gi|4099833|gb|AAD00694.1| bifunctional nuclease [Zinnia elegans]
Length = 280
Score = 128 bits (321), Expect = 1e-028
Identities = 57/83 (68%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 52 LLLLLLFPV-IHGWGIEGHTTVCRIAQSRLSDAAADAVKQLLPKYAENDLGTVCIWADRV 228
LLL+ + PV + GWG++GH C+IAQ RLS A DAV LLP+YAE DL ++C WAD V
Sbjct: 6 LLLVFVAPVTVRGWGVDGHFITCKIAQGRLSQTAVDAVNSLLPEYAEGDLASLCSWADHV 65
Query: 229 KFRYHWSSALHYIDTPDNLCTYQ 297
KFRYHWSSALHYIDTPDNLCTYQ
Sbjct: 66 KFRYHWSSALHYIDTPDNLCTYQ 88
>gi|15221343|ref|NP_176996.1| ENDO 2 (ENDONUCLEASE 2); T/G mismatch-specific
endonuclease/ endonuclease/ nucleic acid binding / single-stranded DNA
specific endodeoxyribonuclease [Arabidopsis thaliana]
Length = 290
Score = 119 bits (296), Expect = 9e-026
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +1
Query: 34 IVPMCSLLLLLLFPVIHGWGIEGHTTVCRIAQSRLSDAAADAVKQLLPKYAENDLGTVCI 213
++ + ++ LL P IHGWG EGH +C+IAQ+RL + AA AVK+LLP+ AE DL ++C+
Sbjct: 10 VMMIITVWLLYAAPNIHGWGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCL 69
Query: 214 WADRVKFRYHWSSALHYIDTPDNLCTYQ 297
WADRVKFRYHWSS LHYI+TPD C+YQ
Sbjct: 70 WADRVKFRYHWSSPLHYINTPD-ACSYQ 96
>gi|21554516|gb|AAM63596.1| putative bifunctional nuclease [Arabidopsis
thaliana]
Length = 290
Score = 119 bits (296), Expect = 9e-026
Identities = 53/88 (60%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +1
Query: 34 IVPMCSLLLLLLFPVIHGWGIEGHTTVCRIAQSRLSDAAADAVKQLLPKYAENDLGTVCI 213
++ + ++ LL P IHGWG EGH +C+IAQ+RL + AA AVK+LLP+ AE DL ++C+
Sbjct: 10 VMMIITVWLLYAAPNIHGWGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCL 69
Query: 214 WADRVKFRYHWSSALHYIDTPDNLCTYQ 297
WADRVKFRYHWSS LHYI+TPD C+YQ
Sbjct: 70 WADRVKFRYHWSSPLHYINTPD-ACSYQ 96
>gi|195620056|gb|ACG31858.1| unknown [Zea mays]
Length = 329
Score = 116 bits (288), Expect = 8e-025
Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Frame = +1
Query: 37 VPMCSLLLLLLFPVI----HGWGIEGHTTVCRIAQSRLSDAAADAVKQLLPKYAENDLGT 204
+P LL+LL + H WG++GH VC+IAQ RLS AAA AVK LLP YA N+L +
Sbjct: 45 LPPLLLLILLAATAVPAPSHAWGVDGHLMVCQIAQGRLSGAAAAAVKDLLPSYAGNNLSS 104
Query: 205 VCIWADRVKFRYHWSSALHYIDTPDNLCTYQ 297
+C WAD VKFRY WSS LHYIDTPD LCTY+
Sbjct: 105 LCSWADDVKFRYPWSSPLHYIDTPDGLCTYR 135
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268,261,940,537
Number of Sequences: 7387702
Number of Extensions: 268261940537
Number of Successful Extensions: 156390812
Number of sequences better than 0.0: 0
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