BLASTX 7.6.2
Query= RU60902 /QuerySize=727
(726 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|20269057|emb|CAC84709.1| aux/IAA protein [Populus tremula x P... 191 4e-047
gi|157350506|emb|CAO40555.1| unnamed protein product [Vitis vini... 114 8e-024
gi|15235385|ref|NP_194593.1| IAA11 (indoleacetic acid-induced pr... 65 3e-009
gi|20466408|gb|AAM20521.1| early auxin-inducible protein 11 [Ara... 65 3e-009
>gi|20269057|emb|CAC84709.1| aux/IAA protein [Populus tremula x Populus
tremuloides]
Length = 289
Score = 191 bits (485), Expect = 4e-047
Identities = 120/230 (52%), Positives = 151/230 (65%), Gaps = 16/230 (6%)
Frame = +2
Query: 41 GFSGGLGTGSVTNMSTVSKDENFAMSSEDSCSPDESDLELCLGLSLGG--GGKAAQQGPV 214
GF GG G+G MSTVS ++N MSSEDS SPDE +LEL LGLSLGG G K Q
Sbjct: 4 GFLGG-GSGGSVCMSTVSMEDNVLMSSEDSSSPDEGELELGLGLSLGGASGFKDFGQRSS 62
Query: 215 GNYARILTAKDFRYVGSNSKSAAAAASSSSSSSSSSSSANVTAGTKRSADSVAAAN--AA 388
YARIL AKD + S+++ +S++SSSSS+ S AN TAGTKR+ADSV+A N A+
Sbjct: 63 QQYARILIAKDL----PSKVSSSSCSSTTSSSSSTLSRANATAGTKRAADSVSATNGAAS 118
Query: 389 NQVVGWPPTRAYRMNSLVHQAKSSATEVFNSEKGECQITSGKGNIGGQENNANAKEGGRL 568
+QVVGWPP R++RM+ +V+QAKS ATE FNS + K + + N N G
Sbjct: 119 SQVVGWPPIRSHRMHIMVNQAKSQATEEFNS------MNKRKNAVEEKVGNKNINIGNTK 172
Query: 569 T-SSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSANAKLIR 715
T +SLFVKVNMDG+ IGRKV+L+AH YE LAQ LE+MF + + R
Sbjct: 173 TRTSLFVKVNMDGTLIGRKVDLSAHGCYETLAQALENMFLRTTTTLNMAR 222
>gi|157350506|emb|CAO40555.1| unnamed protein product [Vitis vinifera]
Length = 268
Score = 114 bits (284), Expect = 8e-024
Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 6/149 (4%)
Frame = +2
Query: 50 GGLGTGSVT--NMSTVSKDENFAMSSEDSCSPDESDLELCLGLSLGGGGKAAQQGPVGNY 223
GG G G T +MSTVSK++N +S+E S PDE++LEL LGLSLGGGG G G
Sbjct: 3 GGSGGGVCTSGSMSTVSKEDNLMVSTEVSSYPDEAELELGLGLSLGGGG----GGGGGVK 58
Query: 224 ARILTAKDFRYVGSNSKSAAAAASSSSSSSSSSSSANVTAGTKRSADSVAAANAANQVVG 403
+ + + + + +SSSSSSSS S + T GTKR ADSVAA+N +QVVG
Sbjct: 59 PQEQGWAQYGRILTAKDFPSTVSSSSSSSSSLSRANRTTVGTKRRADSVAASNNGSQVVG 118
Query: 404 WPPTRAYRMNSLVHQAKSSATEVFNSEKG 490
WPP RAYRMNSL +Q + + N+ G
Sbjct: 119 WPPIRAYRMNSLANQLEFNVQTQCNNTNG 147
Score = 77 bits (188), Expect = 1e-012
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = +2
Query: 518 NIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSA 697
N+ Q NN N G L +S FVKVNMDG PIGRKV+L+AHS YE LA+TLE+MFQGP+
Sbjct: 137 NVQTQCNNTN----GPLNTSFFVKVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTT 192
Query: 698 NAKLIRS 718
I S
Sbjct: 193 TVNAIES 199
>gi|15235385|ref|NP_194593.1| IAA11 (indoleacetic acid-induced protein 11);
transcription factor [Arabidopsis thaliana]
Length = 246
Score = 65 bits (158), Expect = 3e-009
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +2
Query: 530 QENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSANAKL 709
Q N N + ++ +S+FVKV MDG PIGRK++L AH YE+L+ TLE+MF P ++
Sbjct: 121 QAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT 180
Query: 710 IRSGG 724
+ + G
Sbjct: 181 LETDG 185
>gi|20466408|gb|AAM20521.1| early auxin-inducible protein 11 [Arabidopsis
thaliana]
Length = 246
Score = 65 bits (158), Expect = 3e-009
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +2
Query: 530 QENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSANAKL 709
Q N N + ++ +S+FVKV MDG PIGRK++L AH YE+L+ TLE+MF P ++
Sbjct: 121 QAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT 180
Query: 710 IRSGG 724
+ + G
Sbjct: 181 LETDG 185
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268,261,940,537
Number of Sequences: 7387702
Number of Extensions: 268261940537
Number of Successful Extensions: 156390812
Number of sequences better than 0.0: 0
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