BLASTX 7.6.2
Query= RU00254 /QuerySize=501
(500 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q12962|TAF10_HUMAN Transcription initiation factor TFIID subu... 99 1e-020
sp|Q8K0H5|TAF10_MOUSE Transcription initiation factor TFIID subu... 99 1e-020
sp|Q9XZT7|TAFAB_DROME Transcription initiation factor TFIID subu... 90 6e-018
sp|Q9U5W9|TAF10_DROME Transcription initiation factor TFIID subu... 84 4e-016
sp|Q12030|TAF10_YEAST Transcription initiation factor TFIID subu... 63 6e-010
>sp|Q12962|TAF10_HUMAN Transcription initiation factor TFIID subunit 10 OS=Homo
sapiens GN=TAF10 PE=1 SV=1
Length = 218
Score = 99 bits (244), Expect = 1e-020
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = -1
Query: 365 LSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCK 186
L +FL L DYTPTIPD + +YL ++GF+ D R+IRL+++A QKF++++A DALQ CK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175
Query: 185 ARQAAVVXXXXXXXXXXXXPILTMEDLSKALREYGVNVKHQEYF 54
+ A LTMEDL+ AL EYG+NVK YF
Sbjct: 176 MKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217
>sp|Q8K0H5|TAF10_MOUSE Transcription initiation factor TFIID subunit 10 OS=Mus
musculus GN=Taf10 PE=1 SV=1
Length = 218
Score = 99 bits (244), Expect = 1e-020
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = -1
Query: 365 LSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCK 186
L +FL L DYTPTIPD + +YL ++GF+ D R+IRL+++A QKF++++A DALQ CK
Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCK 175
Query: 185 ARQAAVVXXXXXXXXXXXXPILTMEDLSKALREYGVNVKHQEYF 54
+ A LTMEDL+ AL EYG+NVK YF
Sbjct: 176 MKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217
>sp|Q9XZT7|TAFAB_DROME Transcription initiation factor TFIID subunit 10b
OS=Drosophila melanogaster GN=Taf10b PE=1 SV=1
Length = 146
Score = 90 bits (221), Expect = 6e-018
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Frame = -1
Query: 419 NHQSQQSSEGRHDDDEAS----LSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIR 252
+H G D D + LS+F++ L DYTP IPD + HYL GFQ D R++R
Sbjct: 19 SHGQSSGGGGGGDRDRTTPSSHLSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVR 78
Query: 251 LVAVATQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXXPI-LTMEDLSKALREYGVN 75
L+++A QK+++++ DALQ KAR LTMEDL AL +YG+N
Sbjct: 79 LISLAAQKYMSDIIDDALQHSKARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGIN 138
Query: 74 VKHQEY 57
V+ +Y
Sbjct: 139 VRKVDY 144
>sp|Q9U5W9|TAF10_DROME Transcription initiation factor TFIID subunit 10
OS=Drosophila melanogaster GN=Taf10 PE=1 SV=2
Length = 167
Score = 84 bits (206), Expect = 4e-016
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Frame = -1
Query: 434 NEMNHNHQSQQSSEGRHDDDEASLSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLI 255
+E++ + + E +E+ + E + L DY+PTIPD L H L +GF D +++
Sbjct: 34 SELHSDEEQPDVEEVPLTTEESEMDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIV 93
Query: 254 RLVAVATQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXXP------ILTMEDLSKAL 93
RLV+V+ QKF++++A DALQ CK R + L MEDL AL
Sbjct: 94 RLVSVSAQKFISDIANDALQHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPAL 153
Query: 92 REYGVNVKHQEYF 54
++G+ ++ +YF
Sbjct: 154 ADHGITMRKPQYF 166
>sp|Q12030|TAF10_YEAST Transcription initiation factor TFIID subunit 10
OS=Saccharomyces cerevisiae GN=TAF10 PE=1 SV=1
Length = 206
Score = 63 bits (152), Expect = 6e-010
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = -1
Query: 374 EASLSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQ 195
+ +L E L + P IPD ++++YL K+GF DVR+ RL+A+ATQKFV+++A DA +
Sbjct: 71 DKTLEEILEMMDSTPPIIPDAVIDYYLTKNGFNVADVRVKRLLALATQKFVSDIAKDAYE 130
Query: 194 QCKARQAAVV 165
+ R + V
Sbjct: 131 YSRIRSSVAV 140
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,056,603,583
Number of Sequences: 462764
Number of Extensions: 1056603583
Number of Successful Extensions: 18191175
Number of sequences better than 0.0: 0
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