BLASTX 7.6.2
Query= RU00326 /QuerySize=376
(375 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8LPR5|TCP4_ARATH Transcription factor TCP4 OS=Arabidopsis th... 87 2e-017
sp|A2WV68|PCF7_ORYSI Transcription factor PCF7 OS=Oryza sativa s... 51 1e-006
sp|Q8LT05|PCF7_ORYSJ Transcription factor PCF7 OS=Oryza sativa s... 51 1e-006
sp|A2WM14|PCF5_ORYSI Transcription factor PCF5 OS=Oryza sativa s... 51 1e-006
sp|Q8LT07|PCF5_ORYSJ Transcription factor PCF5 OS=Oryza sativa s... 51 1e-006
sp|Q9MAH8|TCP3_ARATH Transcription factor TCP3 OS=Arabidopsis th... 49 4e-006
>sp|Q8LPR5|TCP4_ARATH Transcription factor TCP4 OS=Arabidopsis thaliana GN=TCP4
PE=2 SV=1
Length = 420
Score = 87 bits (213), Expect = 2e-017
Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 7/81 (8%)
Frame = +3
Query: 84 SSGVAELVNQNSSNFLPPSMDSDSIADTIKSFFP-MGAATAAET-----QSFHPASYPPD 245
+ G AE + N S+FLPPSMDSDSIADTIKSFFP +G++T A + ++H +PPD
Sbjct: 156 NGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYH-HQHPPD 214
Query: 246 LLSRTSSQSQDLRLSLHSFQD 308
LLSRT+SQ+QDLRLSL SF D
Sbjct: 215 LLSRTNSQNQDLRLSLQSFPD 235
>sp|A2WV68|PCF7_ORYSI Transcription factor PCF7 OS=Oryza sativa subsp. indica
GN=PCF7 PE=4 SV=1
Length = 457
Score = 51 bits (121), Expect = 1e-006
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Frame = +3
Query: 69 GTMVGSSGVAELVNQNSSNFLPPSMDSDSIADTIKSFFPMGAATAAETQSFHP--ASYPP 242
GTM ++ A + +FLP S+ +D ++D++KS FP + + + H PP
Sbjct: 235 GTMTSAASAA------AGSFLPHSLGADRVSDSVKSLFPSSSTASGAASAGHDEYRGSPP 288
Query: 243 DLLSRTSS--QSQDLRLSLHSFQDPI 314
DLLSRT+S Q Q+L L+L S Q I
Sbjct: 289 DLLSRTTSNQQPQELCLTLQSNQHQI 314
>sp|Q8LT05|PCF7_ORYSJ Transcription factor PCF7 OS=Oryza sativa subsp. japonica
GN=PCF7 PE=2 SV=2
Length = 457
Score = 51 bits (121), Expect = 1e-006
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Frame = +3
Query: 69 GTMVGSSGVAELVNQNSSNFLPPSMDSDSIADTIKSFFPMGAATAAETQSFHP--ASYPP 242
GTM ++ A + +FLP S+ +D ++D++KS FP + + + H PP
Sbjct: 235 GTMTSAASAA------AGSFLPHSLGADRVSDSVKSLFPSSSTASGAASAGHDEYRGSPP 288
Query: 243 DLLSRTSS--QSQDLRLSLHSFQDPI 314
DLLSRT+S Q Q+L L+L S Q I
Sbjct: 289 DLLSRTTSNQQPQELCLTLQSNQHQI 314
>sp|A2WM14|PCF5_ORYSI Transcription factor PCF5 OS=Oryza sativa subsp. indica
GN=PCF5 PE=4 SV=1
Length = 582
Score = 51 bits (120), Expect = 1e-006
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3
Query: 120 SNFLPPSMDSDSIADTIKSFFPMGAATAAETQS 218
++FLPPS+DSD+IADTIKSFFPMG E S
Sbjct: 329 TSFLPPSLDSDAIADTIKSFFPMGGTAGGEASS 361
Score = 49 bits (114), Expect = 7e-006
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 192 AATAAETQSFHPASYPPDLLSRTSSQSQDLRLSLHSFQDPI 314
+ TAA++ + SY PDLLSRT SQSQ+LRLSL S DP+
Sbjct: 362 STTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPM 402
>sp|Q8LT07|PCF5_ORYSJ Transcription factor PCF5 OS=Oryza sativa subsp. japonica
GN=PCF5 PE=2 SV=1
Length = 458
Score = 51 bits (120), Expect = 1e-006
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3
Query: 120 SNFLPPSMDSDSIADTIKSFFPMGAATAAETQS 218
++FLPPS+DSD+IADTIKSFFPMG E S
Sbjct: 205 TSFLPPSLDSDAIADTIKSFFPMGGTAGGEASS 237
Score = 49 bits (114), Expect = 7e-006
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 192 AATAAETQSFHPASYPPDLLSRTSSQSQDLRLSLHSFQDPI 314
+ TAA++ + SY PDLLSRT SQSQ+LRLSL S DP+
Sbjct: 238 STTAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPM 278
>sp|Q9MAH8|TCP3_ARATH Transcription factor TCP3 OS=Arabidopsis thaliana GN=TCP3
PE=2 SV=1
Length = 391
Score = 49 bits (116), Expect = 4e-006
Identities = 25/37 (67%), Positives = 29/37 (78%), Gaps = 4/37 (10%)
Frame = +3
Query: 114 NSSNFLPPSMDSDSIADTIKSFFPMGAATAAETQSFH 224
N S+FLP SMDSDSIADTIKSFFP+ A+ QS+H
Sbjct: 159 NESSFLPASMDSDSIADTIKSFFPV----ASTQQSYH 191
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,056,603,583
Number of Sequences: 462764
Number of Extensions: 1056603583
Number of Successful Extensions: 18191175
Number of sequences better than 0.0: 0
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