BLASTX 7.6.2
Query= RU00438 /QuerySize=580
(579 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein... 109 1e-023
sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein... 82 2e-015
sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein... 72 3e-012
>sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein 33 OS=Oryza
sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1
Length = 601
Score = 109 bits (272), Expect = 1e-023
Identities = 64/112 (57%), Positives = 79/112 (70%), Gaps = 11/112 (9%)
Frame = -1
Query: 483 GFDASGAAAVLSSRSAAFAKQRSQSFIERS--ANHNYGFSSPADSGTPKASNLSNWGSPS 310
G D S A A++SSR++AFAK RSQSFI+R A SPA +G P S LS+WGSP
Sbjct: 475 GLDHSMAKAIMSSRASAFAK-RSQSFIDRGGRAPAARSLMSPATTGAP--SILSDWGSPD 531
Query: 309 GKLDWGIQGEELNKLRKSASFGYRNNGNSVPTVD-----EPDVSWVNTLVKD 169
GKLDWG+QG+EL+KLRKSASF +R +++P EPDVSWVN+LVKD
Sbjct: 532 GKLDWGVQGDELHKLRKSASFAFRGQ-SAMPVATHAAAAEPDVSWVNSLVKD 582
>sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein 24 OS=Oryza
sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1
Length = 764
Score = 82 bits (200), Expect = 2e-015
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 10/100 (10%)
Frame = -1
Query: 450 SSRSAAFAKQRSQSFIERS-ANHNYGFSSPADS---GTPKASNLSNWGSPSGKLDWGIQG 283
S +AA A++ Q RS ++ + G S+ S G+P +S+ S WGSPSG DWG+ G
Sbjct: 608 SHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNG 667
Query: 282 EELNKLRKSASFGYRNNGNSVPTVDEPDVSWVNTLVKDAP 163
EEL KLR+S+SF R+ G D+PD+SWV+TLVK++P
Sbjct: 668 EELGKLRRSSSFELRSGG------DDPDLSWVHTLVKESP 701
>sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein 67 OS=Oryza
sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1
Length = 619
Score = 72 bits (174), Expect = 3e-012
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
Frame = -1
Query: 453 LSSRSAAFAKQR---SQSFIERSANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQG 283
+SSR A QR Q + ++ + G ++ G+P +S++S WG PSG DWG
Sbjct: 471 MSSRLLAALAQREKMQQQTLRSMSSRDLGNAASLLVGSPVSSSMSKWGFPSGNPDWGADD 530
Query: 282 EELNKLRKSASFGYRN---NGNSVPTVDEPDVSWVNTLVKDAPGPSR 151
EEL +L++ +SF R+ NGN EPD+SWVNTLVK+ P P +
Sbjct: 531 EELGRLKRCSSFELRSGAANGN-----HEPDLSWVNTLVKE-PTPEK 571
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,411,116,117
Number of Sequences: 462764
Number of Extensions: 1411116117
Number of Successful Extensions: 26629639
Number of sequences better than 0.0: 0
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