BLASTX 7.6.2
Query= RU00488 /QuerySize=399
(398 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIR... 67 2e-011
sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo... 64 2e-010
sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysi... 63 3e-010
sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysi... 63 3e-010
sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Air... 62 8e-010
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 60 3e-009
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3... 58 9e-009
sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces c... 54 1e-007
sp|Q13342|LY10_HUMAN Nuclear body protein SP140 OS=Homo sapiens ... 48 9e-006
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 67 bits (161), Expect = 2e-011
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = -1
Query: 251 EDSDDLCFICRKGGKVICCDSCPRVFHAGCLSLP--TVPNGTWYCKHC 114
+ ++D C +CR GG++ICCD CPR FH CLS P +P+GTW C C
Sbjct: 293 QKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens
GN=ZMYND8 PE=1 SV=2
Length = 1186
Score = 64 bits (153), Expect = 2e-010
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = -1
Query: 245 SDDLCFICRKGGKVICCDSCPRVFHAGCLSLPTVPNGTWYCKHCQ 111
+D C++C + G+V+CC+ CPRV+HA CL L + P G W+C C+
Sbjct: 87 NDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECE 131
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4
lysine-20 specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 63 bits (151), Expect = 3e-010
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 233 CFICRKGGKVICCDSCPRVFHAGCLSLPTVPNGTWYCKHCQ 111
CF+C +GG ++CCDSCP FH CL++ +P G WYC C+
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDCK 1749
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4
lysine-20 specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 63 bits (151), Expect = 3e-010
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = -1
Query: 233 CFICRKGGKVICCDSCPRVFHAGCLSLPTVPNGTWYCKHCQ 111
CF+C +GG ++CCDSCP FH CL++ +P G WYC C+
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDCK 1647
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 62 bits (148), Expect = 8e-010
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -1
Query: 251 EDSDDLCFICRKGGKVICCDSCPRVFHAGCLSLP--TVPNGTWYCKHC 114
+ ++D C +C GG++ICCD CPR FH CLS P +P+G W C C
Sbjct: 295 QKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC 342
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 60 bits (143), Expect = 3e-009
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = -1
Query: 251 EDSDDLCFICRKGGKVICCDSCPRVFHAGCLSLP--TVPNGTWYCKHC 114
++ + C +C+ GG+++CCDSCP +H CL+ P T+P+G W C C
Sbjct: 434 DEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 58 bits (139), Expect = 9e-009
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = -1
Query: 242 DDLCFICRKGGKVICCDSCPRVFHAGCLSLP--TVPNGTWYCKHC 114
++ C +C GG ++CCDSCP V+H CLS P ++P G W C C
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae
GN=JHD2 PE=1 SV=1
Length = 728
Score = 54 bits (129), Expect = 1e-007
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Frame = -1
Query: 251 EDSDDLCFICRKGG---KVICCDSCPRVFHAGCLSLP--TVPNGTWYCKHC 114
ED DD C +CRK + I CDSC + FH CLS P VP+G W C C
Sbjct: 232 EDDDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
>sp|Q13342|LY10_HUMAN Nuclear body protein SP140 OS=Homo sapiens GN=SP140 PE=2
SV=2
Length = 867
Score = 48 bits (113), Expect = 9e-006
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 239 DLCFICRKGGKVICCDSCPRVFHAGCLSLPTVPNGT-WYCKHCQ 111
D C +CR GG++ CCD+C RVFH C P T W C C+
Sbjct: 691 DECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCR 734
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,411,116,117
Number of Sequences: 462764
Number of Extensions: 1411116117
Number of Successful Extensions: 26629639
Number of sequences better than 0.0: 0
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