BLASTX 7.6.2
Query= RU00510 /QuerySize=674
(673 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 92 2e-018
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 92 2e-018
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 91 5e-018
sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B... 89 2e-017
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 89 2e-017
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 89 2e-017
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 89 2e-017
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 88 4e-017
sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 86 2e-016
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 86 2e-016
sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-... 84 9e-016
sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-... 84 9e-016
sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-... 84 9e-016
sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=H... 84 9e-016
sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=M... 84 9e-016
sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rat... 84 9e-016
sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-... 82 3e-015
sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-... 82 3e-015
sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-li... 80 1e-014
sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-... 79 3e-014
sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0... 77 6e-014
sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0... 77 6e-014
sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 O... 76 1e-013
sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2... 76 2e-013
sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2... 76 2e-013
sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 ... 72 3e-012
sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2... 71 6e-012
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 69 2e-011
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 69 2e-011
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 69 2e-011
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2
SV=2
Length = 406
Score = 92 bits (227), Expect = 2e-018
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Frame = -3
Query: 404 DLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRV 225
++GK+F+GG+ W T +E L+ YF YGEVV+ VIM+D+ T ++RGFGFV F DP V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 224 VKDK-HMIDSRTVEAKKGCS*GG----SAHAKQNWGCTWFSWSWTHEKDLCWGVLASTVT 60
+ + H +D R ++ K C+ G K+ W S S K G+
Sbjct: 68 LASRPHTLDGRNIDPKP-CTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGI-PHNCG 125
Query: 59 ENDFKTYFDQFGTVTDV 9
E + + YF +FG VT+V
Sbjct: 126 ETELREYFKKFGVVTEV 142
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1
SV=1
Length = 360
Score = 92 bits (227), Expect = 2e-018
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Frame = -3
Query: 404 DLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRV 225
++GK+F+GG+ W T +E L+ YF YGEVV+ VIM+D+ T ++RGFGFV F DP V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 224 VKDK-HMIDSRTVEAKKGCS*GG----SAHAKQNWGCTWFSWSWTHEKDLCWGVLASTVT 60
+ + H +D R ++ K C+ G + ++ W + + G +
Sbjct: 68 LASRPHTLDGRNIDPKP-CTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCG 126
Query: 59 ENDFKTYFDQFGTVTD 12
E + K YF++FG VT+
Sbjct: 127 ETELKEYFNRFGVVTE 142
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1
SV=1
Length = 407
Score = 91 bits (224), Expect = 5e-018
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Frame = -3
Query: 404 DLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRV 225
++GK+F+GG+ W T +E L+ YF YGEVV+ VIM+D+ T ++RGFGFV F DP V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 224 VKDK-HMIDSRTVEAKKGCS*GG----SAHAKQNWGCTWFSWSWTHEKDLCWGVLASTVT 60
+ + H +D R ++ K C+ G K+ W S + K G+
Sbjct: 68 LASRPHTLDGRNIDPKP-CTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGI-PHNCG 125
Query: 59 ENDFKTYFDQFGTVTDV 9
E + + YF +FG VT+V
Sbjct: 126 ETELREYFKKFGVVTEV 142
>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo
sapiens GN=HNRNPAB PE=1 SV=2
Length = 332
Score = 89 bits (220), Expect = 2e-017
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
E D GK+F+GG+SWDT ++ LK+YF +GEVV+ I D TGR+RGFGF++F D A +
Sbjct: 65 EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVE 124
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V+ K H +D R ++ KK
Sbjct: 125 KVLDQKEHRLDGRVIDPKK 143
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4
OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
Length = 534
Score = 89 bits (219), Expect = 2e-017
Identities = 37/73 (50%), Positives = 54/73 (73%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG++WDT E+ L+EYF YG V + IM+D ATGR+RGFGF+ F P+ D VVK
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 215 KHMIDSRTVEAKK 177
+H++D + ++ K+
Sbjct: 220 QHILDGKVIDPKR 232
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens
GN=MSI2 PE=1 SV=1
Length = 328
Score = 89 bits (219), Expect = 2e-017
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 404 DLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRV 225
D GK+FIGG+SW T + L++YF +GE+ E ++MRD T R+RGFGFV FADPA D+V
Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78
Query: 224 V-KDKHMIDSRTVEAK 180
+ + H +DS+T++ K
Sbjct: 79 LGQPHHELDSKTIDPK 94
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus
GN=Msi2 PE=1 SV=1
Length = 346
Score = 89 bits (219), Expect = 2e-017
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = -3
Query: 404 DLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRV 225
D GK+FIGG+SW T + L++YF +GE+ E ++MRD T R+RGFGFV FADPA D+V
Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78
Query: 224 V-KDKHMIDSRTVEAK 180
+ + H +DS+T++ K
Sbjct: 79 LGQPHHELDSKTIDPK 94
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus
musculus GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 88 bits (217), Expect = 4e-017
Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
E D GK+F+GG+SWDT ++ LK+YF +GEVV+ I D TGR+RGFGF++F D + +
Sbjct: 71 EEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE 130
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V+ K H +D R ++ KK
Sbjct: 131 KVLDQKEHRLDGRVIDPKK 149
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 86 bits (210), Expect = 2e-016
Identities = 34/78 (43%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
E + GK+F+GG+SW+T +E L YF +G++++ V+M++ +GR+RGFGFV FADP +
Sbjct: 3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN 62
Query: 230 RVVKD-KHMIDSRTVEAK 180
V+++ H +D RT++ K
Sbjct: 63 HVLQNGPHTLDGRTIDPK 80
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15
OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1
Length = 474
Score = 86 bits (210), Expect = 2e-016
Identities = 31/74 (41%), Positives = 55/74 (74%)
Frame = -3
Query: 398 GKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVK 219
GK+FIGG++W+T ++ L++YF+ +GEV++ +MRD TGR+RGFGF+ F +P + V+
Sbjct: 163 GKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS 222
Query: 218 DKHMIDSRTVEAKK 177
+H +D + ++ K+
Sbjct: 223 KEHHLDGKIIDPKR 236
>sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like OS=Homo
sapiens GN=HNRPDL PE=1 SV=3
Length = 420
Score = 84 bits (205), Expect = 9e-016
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
+ D GK+FIGG+SWDT ++ L EY +GEVV+ I D TGR+RGFGFV+F D A D
Sbjct: 144 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 203
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V++ K H +D + ++ K+
Sbjct: 204 KVLELKEHKLDGKLIDPKR 222
>sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like OS=Mus
musculus GN=Hnrpdl PE=1 SV=1
Length = 301
Score = 84 bits (205), Expect = 9e-016
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
+ D GK+FIGG+SWDT ++ L EY +GEVV+ I D TGR+RGFGFV+F D A D
Sbjct: 25 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 84
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V++ K H +D + ++ K+
Sbjct: 85 KVLELKEHKLDGKLIDPKR 103
>sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus
tropicalis GN=hnrpdl PE=2 SV=1
Length = 297
Score = 84 bits (205), Expect = 9e-016
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
+ D GK+FIGG+SWDT ++ L EY +GEVV+ I D TGR+RGFGFV+F D D
Sbjct: 22 QQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVD 81
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V++ K H +D + ++ K+
Sbjct: 82 KVLETKEHKLDGKLIDPKR 100
>sp|O43347|MSI1H_HUMAN RNA-binding protein Musashi homolog 1 OS=Homo sapiens
GN=MSI1 PE=1 SV=1
Length = 362
Score = 84 bits (205), Expect = 9e-016
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVV-K 219
K+FIGG+SW T +E L+EYF +GEV E ++MRD T R+RGFGFV F D A D+V+ +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 218 DKHMIDSRTVEAK 180
+H +DS+T++ K
Sbjct: 81 SRHELDSKTIDPK 93
>sp|Q61474|MSI1H_MOUSE RNA-binding protein Musashi homolog 1 OS=Mus musculus
GN=Msi1 PE=1 SV=1
Length = 362
Score = 84 bits (205), Expect = 9e-016
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVV-K 219
K+FIGG+SW T +E L+EYF +GEV E ++MRD T R+RGFGFV F D A D+V+ +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 218 DKHMIDSRTVEAK 180
+H +DS+T++ K
Sbjct: 81 SRHELDSKTIDPK 93
>sp|Q8K3P4|MSI1H_RAT RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus
GN=Msi1 PE=2 SV=1
Length = 362
Score = 84 bits (205), Expect = 9e-016
Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVV-K 219
K+FIGG+SW T +E L+EYF +GEV E ++MRD T R+RGFGFV F D A D+V+ +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 218 DKHMIDSRTVEAK 180
+H +DS+T++ K
Sbjct: 81 SRHELDSKTIDPK 93
>sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus
gallus GN=HNRPDL PE=2 SV=1
Length = 301
Score = 82 bits (201), Expect = 3e-015
Identities = 37/79 (46%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
+ D GK+FIGG+SWDT ++ L EY +GEVV+ I D TGR+RGFGFV+F D A +
Sbjct: 26 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVE 85
Query: 230 RVVKDK-HMIDSRTVEAKK 177
+V++ K H +D + ++ K+
Sbjct: 86 KVLELKEHKLDGKLIDPKR 104
>sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A
OS=Xenopus laevis GN=hnrpdl-A PE=2 SV=1
Length = 293
Score = 82 bits (200), Expect = 3e-015
Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = -3
Query: 410 EPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAD 231
+ D GK+FIGG+SWDT ++ L EY +GEV++ I D TGR+RGFGFV+F D D
Sbjct: 22 QQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVD 81
Query: 230 RVVK-DKHMIDSRTVEAKK 177
+V++ ++H +D + ++ K+
Sbjct: 82 KVLETNEHKLDGKLIDPKR 100
>sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus
norvegicus GN=Hnrpdl PE=2 SV=1
Length = 322
Score = 80 bits (196), Expect = 1e-014
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG+SWDT ++ L EY +GEVV+ I D TGR+RGFGFV+F D A D+V++
Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111
Query: 215 K-HMIDSRTVEAKK 177
K H +D + ++ K+
Sbjct: 112 KEHKLDGKLIDPKR 125
>sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B
OS=Xenopus laevis GN=hnrpdl-B PE=2 SV=1
Length = 291
Score = 79 bits (192), Expect = 3e-014
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG+SWDT ++ L EY +GEV++ I D TGR+RGFGFV+F D D+V++
Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94
Query: 215 K-HMIDSRTVEAKK 177
K H +D + ++ K+
Sbjct: 95 KEHKLDGKLIDPKR 108
>sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo
sapiens GN=HNRNPD PE=1 SV=1
Length = 355
Score = 77 bits (189), Expect = 6e-014
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG+SWDT ++ LK+YF +GEVV+ + D TGR+RGFGFV+F + D+V+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 215 K-HMIDSRTVEAKK 177
K H ++ + ++ K+
Sbjct: 158 KEHKLNGKVIDPKR 171
>sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 OS=Mus
musculus GN=Hnrnpd PE=1 SV=2
Length = 355
Score = 77 bits (189), Expect = 6e-014
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG+SWDT ++ LK+YF +GEVV+ + D TGR+RGFGFV+F + D+V+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 215 K-HMIDSRTVEAKK 177
K H ++ + ++ K+
Sbjct: 158 KEHKLNGKVIDPKR 171
>sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus
norvegicus GN=Hnrnpd PE=2 SV=1
Length = 353
Score = 76 bits (186), Expect = 1e-013
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+FIGG+SWDT ++ LK+YF +G+VV+ + D TGR+RGFGFV+F + D+V+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155
Query: 215 K-HMIDSRTVEAKK 177
K H ++ + ++ K+
Sbjct: 156 KEHKLNGKVIDPKR 169
>sp|P22626|ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Homo
sapiens GN=HNRNPA2B1 PE=1 SV=2
Length = 353
Score = 76 bits (185), Expect = 2e-013
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -3
Query: 419 RRMEPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPA 240
+R + K+FIGG+S++T EE L+ Y++ +G++ + V+MRD A+ R+RGFGFV F+ A
Sbjct: 14 KREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMA 73
Query: 239 VADRVVKDK-HMIDSRTVEAKK 177
D + + H ID R VE K+
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKR 95
>sp|O88569|ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus
musculus GN=Hnrnpa2b1 PE=1 SV=2
Length = 353
Score = 76 bits (185), Expect = 2e-013
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -3
Query: 419 RRMEPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPA 240
+R + K+FIGG+S++T EE L+ Y++ +G++ + V+MRD A+ R+RGFGFV F+ A
Sbjct: 14 KREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMA 73
Query: 239 VADRVVKDK-HMIDSRTVEAKK 177
D + + H ID R VE K+
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKR 95
>sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2
OS=Xenopus laevis PE=2 SV=1
Length = 358
Score = 72 bits (175), Expect = 3e-012
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+F+GGI DT+E L+EYF+ YG++ I+ D+ +G+ RGFGFV F D D++V
Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQ 160
Query: 215 K-HMIDSRTVEAKKGCS 168
K H I+ E +K S
Sbjct: 161 KYHTINGHNAEVRKALS 177
>sp|Q5RBU8|ROA2_PONAB Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Pongo
abelii GN=HNRNPA2B1 PE=2 SV=1
Length = 353
Score = 71 bits (172), Expect = 6e-012
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -3
Query: 395 KIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVFADPAVADRVVKD 216
K+F+GGI DT+E L++YF+ YG++ I+ DR +G+ RGFGFV F D D++V
Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172
Query: 215 K-HMIDSRTVEAKKGCS 168
K H I+ E +K S
Sbjct: 173 KHHTINGHNAEVRKALS 189
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens
GN=CIRBP PE=1 SV=1
Length = 172
Score = 69 bits (168), Expect = 2e-011
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = -3
Query: 413 MEPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVF--ADPA 240
M D GK+F+GG+S+DT+E+ L++ F YG++ E V+++DR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 239 VADRVVKDKHMIDSRTV 189
+ + +D R +
Sbjct: 61 KDAMMAMNGKSVDGRQI 77
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii
GN=CIRBP PE=2 SV=1
Length = 172
Score = 69 bits (168), Expect = 2e-011
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = -3
Query: 413 MEPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVF--ADPA 240
M D GK+F+GG+S+DT+E+ L++ F YG++ E V+++DR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 239 VADRVVKDKHMIDSRTV 189
+ + +D R +
Sbjct: 61 KDAMMAMNGKSVDGRQI 77
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 69 bits (167), Expect = 2e-011
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = -3
Query: 413 MEPDLGKIFIGGISWDTDEEQLKEYFQNYGEVVEAVIMRDRATGRARGFGFVVF--ADPA 240
M D GK+F+GG+S+DT+E+ L++ F YG++ E V+++DR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 239 VADRVVKDKHMIDSRTV 189
+ + +D R +
Sbjct: 61 KDAMMAMNGKSVDGRQI 77
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,411,116,117
Number of Sequences: 462764
Number of Extensions: 1411116117
Number of Successful Extensions: 26629639
Number of sequences better than 0.0: 0
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