BLASTX 7.6.2
Query= RU01456 /QuerySize=679
(678 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8LHP0|ELOF1_ORYSJ Transcription elongation factor 1 homolog ... 131 4e-030
sp|Q8LEF3|ELOF1_ARATH Transcription elongation factor 1 homolog ... 129 2e-029
sp|P36053|ELF1_YEAST Transcription elongation factor 1 OS=Saccha... 79 3e-014
sp|Q9XVZ8|ELOF1_CAEEL Transcription elongation factor 1 homolog ... 76 2e-013
sp|A4IFR3|ELOF1_BOVIN Transcription elongation factor 1 homolog ... 75 2e-013
sp|P60002|ELOF1_HUMAN Transcription elongation factor 1 homolog ... 75 2e-013
sp|P60003|ELOF1_MOUSE Transcription elongation factor 1 homolog ... 75 2e-013
sp|O13868|ELOF1_SCHPO Transcription elongation factor 1 homolog ... 75 3e-013
sp|Q8MQI6|ELOF1_DROME Transcription elongation factor 1 homolog ... 70 1e-011
sp|Q9U501|ELOF1_MANSE Transcription elongation factor 1 homolog ... 69 2e-011
>sp|Q8LHP0|ELOF1_ORYSJ Transcription elongation factor 1 homolog OS=Oryza sativa
subsp. japonica GN=Os07g0631100 PE=3 SV=1
Length = 89
Score = 131 bits (329), Expect = 4e-030
Identities = 61/71 (85%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LDTVF+CPFCNHG SVECRIDMKNLIGEA C ICQE+FSTT+ ALTE IDIYSEWIDECE
Sbjct: 19 LDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECE 78
Query: 314 RVNTV-DDDGA 343
RVN V DDDGA
Sbjct: 79 RVNNVEDDDGA 89
>sp|Q8LEF3|ELOF1_ARATH Transcription elongation factor 1 homolog OS=Arabidopsis
thaliana GN=At5g46030 PE=2 SV=1
Length = 120
Score = 129 bits (322), Expect = 2e-029
Identities = 57/68 (83%), Positives = 63/68 (92%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LDT+F+CPFCNHG SVEC IDMK+LIG+A C IC+ESFSTTITALTEAIDIYSEWIDECE
Sbjct: 19 LDTIFSCPFCNHGSSVECIIDMKHLIGKAACRICEESFSTTITALTEAIDIYSEWIDECE 78
Query: 314 RVNTVDDD 337
RVNT +DD
Sbjct: 79 RVNTAEDD 86
>sp|P36053|ELF1_YEAST Transcription elongation factor 1 OS=Saccharomyces
cerevisiae GN=ELF1 PE=1 SV=1
Length = 145
Score = 79 bits (192), Expect = 3e-014
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LDT F C FCNH SV C +D KN IG C IC +SF T I +L++ +D+YS+W D E
Sbjct: 19 LDTKFNCLFCNHEKSVSCTLDKKNSIGTLSCKICGQSFQTRINSLSQPVDVYSDWFDAVE 78
Query: 314 RVNT 325
VN+
Sbjct: 79 EVNS 82
>sp|Q9XVZ8|ELOF1_CAEEL Transcription elongation factor 1 homolog
OS=Caenorhabditis elegans GN=Y54G11A.11 PE=2 SV=1
Length = 84
Score = 76 bits (185), Expect = 2e-013
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LDT F CPFCNH E ++D + +G C +C E F T I L+E ID+YS+W+D CE
Sbjct: 20 LDTQFNCPFCNHERVCEVKMDREKNVGYISCRVCSEDFQTNINYLSEPIDVYSDWVDACE 79
Query: 314 RVN 322
+ N
Sbjct: 80 QAN 82
>sp|A4IFR3|ELOF1_BOVIN Transcription elongation factor 1 homolog OS=Bos taurus
GN=ELOF1 PE=3 SV=1
Length = 83
Score = 75 bits (184), Expect = 2e-013
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
L+T FTCPFCNH S + ++D G C +C E F T IT L+E +D+YS+WID CE
Sbjct: 20 LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACE 79
Query: 314 RVN 322
N
Sbjct: 80 AAN 82
>sp|P60002|ELOF1_HUMAN Transcription elongation factor 1 homolog OS=Homo sapiens
GN=ELOF1 PE=2 SV=1
Length = 83
Score = 75 bits (184), Expect = 2e-013
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
L+T FTCPFCNH S + ++D G C +C E F T IT L+E +D+YS+WID CE
Sbjct: 20 LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACE 79
Query: 314 RVN 322
N
Sbjct: 80 AAN 82
>sp|P60003|ELOF1_MOUSE Transcription elongation factor 1 homolog OS=Mus musculus
GN=Elof1 PE=1 SV=1
Length = 83
Score = 75 bits (184), Expect = 2e-013
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
L+T FTCPFCNH S + ++D G C +C E F T IT L+E +D+YS+WID CE
Sbjct: 20 LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACE 79
Query: 314 RVN 322
N
Sbjct: 80 AAN 82
>sp|O13868|ELOF1_SCHPO Transcription elongation factor 1 homolog
OS=Schizosaccharomyces pombe GN=SPAC1B3.02c PE=1 SV=1
Length = 107
Score = 75 bits (183), Expect = 3e-013
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LDT FTC FCNH SV C +D ++ +G C IC +S ITAL+ ID+YS+WID C+
Sbjct: 19 LDTTFTCLFCNHEKSVSCSLDKQSGVGNLHCKICGQSHQCLITALSAPIDVYSDWIDACD 78
Query: 314 RV 319
V
Sbjct: 79 AV 80
>sp|Q8MQI6|ELOF1_DROME Transcription elongation factor 1 homolog OS=Drosophila
melanogaster GN=CG40228 PE=1 SV=1
Length = 82
Score = 70 bits (170), Expect = 1e-011
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LD F CPFCNH S E ++D + C +C E F T I L+E ID+Y++W+D CE
Sbjct: 20 LDQQFNCPFCNHEKSCEVKMDKSRNTAKITCRVCLEDFQTGINFLSEPIDVYNDWVDACE 79
Query: 314 RVN 322
N
Sbjct: 80 TAN 82
>sp|Q9U501|ELOF1_MANSE Transcription elongation factor 1 homolog OS=Manduca
sexta PE=3 SV=1
Length = 82
Score = 69 bits (167), Expect = 2e-011
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = +2
Query: 134 LDTVFTCPFCNHGDSVECRIDMKNLIGEAICNICQESFSTTITALTEAIDIYSEWIDECE 313
LD F CPFCNH S E ++D C +C E F TT L+E ID+Y++W+D CE
Sbjct: 20 LDQQFNCPFCNHEKSCEVKMDRAKNTAMIQCTVCLEDFHTTTNVLSEPIDVYNDWVDACE 79
Query: 314 RVN 322
N
Sbjct: 80 SAN 82
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,055,803,260
Number of Sequences: 462764
Number of Extensions: 3055803260
Number of Successful Extensions: 28798457
Number of sequences better than 0.0: 0
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