BLASTX 7.6.2
Query= RU01690 /QuerySize=1591
(1590 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog O... 771 4e-222
sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosop... 658 4e-188
sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo s... 650 1e-185
sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus mu... 650 1e-185
sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus n... 650 1e-185
sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus... 647 7e-185
sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4 ... 634 5e-181
sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog O... 609 3e-173
sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog O... 587 9e-167
sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog O... 577 7e-164
sp|P46507|PRS6B_MANSE 26S protease regulatory subunit 6B OS=Mand... 387 1e-106
sp|P46502|PRS6B_CAEEL Probable 26S protease regulatory subunit 6... 385 5e-106
sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog... 380 2e-104
sp|O28303|PSMR_ARCFU Proteasome-activating nucleotidase OS=Archa... 380 2e-104
sp|Q3T030|PRS6B_BOVIN 26S protease regulatory subunit 6B OS=Bos ... 379 4e-104
sp|P43686|PRS6B_HUMAN 26S protease regulatory subunit 6B OS=Homo... 379 4e-104
sp|Q4R7L3|PRS6B_MACFA 26S protease regulatory subunit 6B OS=Maca... 379 4e-104
sp|Q63570|PRS6B_RAT 26S protease regulatory subunit 6B OS=Rattus... 379 4e-104
sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog... 372 4e-102
sp|P54775|PRS6B_MOUSE 26S protease regulatory subunit 6B OS=Mus ... 369 4e-101
sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog... 368 6e-101
sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog... 361 8e-099
sp|Q58576|PSMR_METJA Proteasome-activating nucleotidase OS=Metha... 359 3e-098
sp|O26824|PSMR_METTH Proteasome-activating nucleotidase OS=Metha... 359 3e-098
sp|Q8TX03|PSMR_METKA Proteasome-activating nucleotidase OS=Metha... 356 2e-097
sp|A3CV35|PSMR_METMJ Proteasome-activating nucleotidase OS=Metha... 350 2e-095
sp|Q0W257|PSMR_UNCMA Proteasome-activating nucleotidase OS=Uncul... 343 3e-093
sp|A7I8B8|PSMR_METB6 Proteasome-activating nucleotidase OS=Metha... 340 2e-092
sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosop... 335 8e-091
sp|Q2FQ56|PSMR_METHJ Proteasome-activating nucleotidase OS=Metha... 335 8e-091
>sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa
subsp. japonica GN=TBP2 PE=2 SV=2
Length = 448
Score = 771 bits (1989), Expect = 4e-222
Identities = 396/448 (88%), Positives = 412/448 (91%), Gaps = 2/448 (0%)
Frame = +2
Query: 59 MGQGTPGGLNRQ-GLPGDRKPDGN-DXXXXXXXXXXXXXRVGRKQRKQKGPEAAARLPTV 232
MGQGTPGG+ +Q G PGDRKP G+ D RVGRKQRKQKGPEAAARLP V
Sbjct: 1 MGQGTPGGMGKQGGAPGDRKPGGDGDKKDRKFEPPAAPSRVGRKQRKQKGPEAAARLPNV 60
Query: 233 TPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNL 412
PL+KC+LRLLKLER+KDYLLMEEEFV QERL+P E+K EEDRSKVDDLRG+PMSVG+L
Sbjct: 61 APLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSL 120
Query: 413 EELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVS 592
EE+IDE+HAIVSSSVGPEYYVGILSFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVS
Sbjct: 121 EEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVS 180
Query: 593 VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK 772
VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK
Sbjct: 181 VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK 240
Query: 773 TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGT 952
TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD+LSPSIVFIDEIDAVGT
Sbjct: 241 TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGT 300
Query: 953 KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 1132
KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE
Sbjct: 301 KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 360
Query: 1133 FPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM 1312
FPLPDIKTRRRIFQIHTS+MTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM
Sbjct: 361 FPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRM 420
Query: 1313 KVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
KVTHADF EGVPEGLYM
Sbjct: 421 KVTHADFKKAKEKVMFKKKEGVPEGLYM 448
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila
melanogaster GN=Pros26.4 PE=1 SV=2
Length = 439
Score = 658 bits (1696), Expect = 4e-188
Identities = 324/409 (79%), Positives = 372/409 (90%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
RVG+K+R+ KGP+AA +LP VTP T+C+L+LLKLERIKDYL+ME+EF+ NQERLKPQ+EK
Sbjct: 31 RVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQERLKPQDEK 90
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+RSKVDDLRG+PMSVGNLEE+ID+NHAIVS+SVG E+YV ILSFVDKDQLEPGC++L
Sbjct: 91 NEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVL 150
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++KV +VVG+L D+ DPMV+VMK+EKAP E+YADIGGLD QIQEIKE+VELPLTHPE Y
Sbjct: 151 LNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYY 210
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELF
Sbjct: 211 EEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 270
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ +PSIVFIDEIDAVGTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+AT
Sbjct: 271 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 330
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIE+LDPAL+RPGRIDRKIEFPLPD KT+RRIF IHTSRMTLA+DVNL E +M KD+ S
Sbjct: 331 NRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLS 390
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKAICTEAGL+ALRERRMKVT+ DF EG PEGLY+
Sbjct: 391 GADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 439
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1
PE=1 SV=1
Length = 440
Score = 650 bits (1675), Expect = 1e-185
Identities = 319/409 (77%), Positives = 371/409 (90%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
RVG+K++K KGP+AA++LP VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK
Sbjct: 32 RVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEK 91
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L
Sbjct: 92 QEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVL 151
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE+VELPLTHPE Y
Sbjct: 152 LNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYY 211
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELF
Sbjct: 212 EEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 271
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+AT
Sbjct: 272 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIE+LDPAL+RPGRIDRKIEFPLPD KT++RIFQIHTSRMTLADDV L++ +M KD+ S
Sbjct: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 391
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKAICTEAGL+ALRERRMKVT+ DF EG PEGLY+
Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1
PE=1 SV=1
Length = 440
Score = 650 bits (1675), Expect = 1e-185
Identities = 319/409 (77%), Positives = 371/409 (90%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
RVG+K++K KGP+AA++LP VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK
Sbjct: 32 RVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEK 91
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L
Sbjct: 92 QEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVL 151
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE+VELPLTHPE Y
Sbjct: 152 LNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYY 211
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELF
Sbjct: 212 EEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 271
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+AT
Sbjct: 272 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIE+LDPAL+RPGRIDRKIEFPLPD KT++RIFQIHTSRMTLADDV L++ +M KD+ S
Sbjct: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 391
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKAICTEAGL+ALRERRMKVT+ DF EG PEGLY+
Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus
GN=Psmc1 PE=2 SV=1
Length = 440
Score = 650 bits (1675), Expect = 1e-185
Identities = 319/409 (77%), Positives = 371/409 (90%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
RVG+K++K KGP+AA++LP VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK
Sbjct: 32 RVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEK 91
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L
Sbjct: 92 QEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVL 151
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++KV +V+G+L D+ DP+V+VMKVEKAP E+YADIGGLD QIQEIKE+VELPLTHPE Y
Sbjct: 152 LNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYY 211
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELF
Sbjct: 212 EEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 271
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+AT
Sbjct: 272 RVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIE+LDPAL+RPGRIDRKIEFPLPD KT++RIFQIHTSRMTLADDV L++ +M KD+ S
Sbjct: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 391
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKAICTEAGL+ALRERRMKVT+ DF EG PEGLY+
Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL 440
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus
GN=PSMC1 PE=2 SV=1
Length = 440
Score = 647 bits (1668), Expect = 7e-185
Identities = 318/409 (77%), Positives = 369/409 (90%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
RVG+K++K KGP+AA++ P VTP T+C+L+LLKLERIKDYLLMEEEF+ NQE++KP EEK
Sbjct: 32 RVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEK 91
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+RSKVDDLRG+PMSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKD LEPGC++L
Sbjct: 92 QEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVL 151
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++KV +V+G+L D+ DP+V+VMK+EKAP E+YADIGGLD QIQEIKE+VELPLTHPE Y
Sbjct: 152 LNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYY 211
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELF
Sbjct: 212 EEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 271
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+AT
Sbjct: 272 RVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMAT 331
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIE+LDPAL+RPGRIDRKIEFPLPD KT++RIFQIHTSRMTLADDV L+E +M KD+ S
Sbjct: 332 NRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLS 391
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKAICTEAGL+ALRERRMKVT+ DF EG PEGLY+
Sbjct: 392 GADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTEGTPEGLYL 440
>sp|O16368|PRS4_CAEEL Probable 26S protease regulatory subunit 4
OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1
Length = 443
Score = 634 bits (1635), Expect = 5e-181
Identities = 310/409 (75%), Positives = 366/409 (89%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
R+G+K++ KGP+AA++LP VTP +C+L+LLK ERIKDYLLME+EF+ NQERLKPQEE+
Sbjct: 35 RIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEER 94
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE+R+KVD+LRG+PM+VG+LEE+ID+ HAIVS++VG E+YV I+SFVDK+QLEPGC++L
Sbjct: 95 QEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVL 154
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+++K +V+G+L D+ DPMVSVMK+EKAP E+YAD+GGLD QIQEIKEAVELPLTHPE Y
Sbjct: 155 LNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYY 214
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GIRPPKGVILYG PGTGKTLLAKAVAN TSATFLR+VGSELIQKYLGDGPK+VRELF
Sbjct: 215 EEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELF 274
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
RVA++ +PSIVFIDEIDAVGTKRYD++SGGEREIQRTMLELLNQLDGFDSRGDVKV++AT
Sbjct: 275 RVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMAT 334
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
NRIESLDPAL+RPGRIDRKIEFPLPD KT+RRIFQIHTSRMTL +VNLEEF+ KDE S
Sbjct: 335 NRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELS 394
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADIKA+CTEAGLLALRERRM+VT DF EG PE LY+
Sbjct: 395 GADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKEGAPEELYL 443
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 609 bits (1568), Expect = 3e-173
Identities = 299/408 (73%), Positives = 356/408 (87%), Gaps = 3/408 (0%)
Frame = +2
Query: 182 KQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKP---QEEKA 352
K++K++G E + +LP +TP +KCKL+ LKLERIKDYLLME+EF+ N + +P + K
Sbjct: 32 KKKKRRGAETSTKLPVITPHSKCKLKQLKLERIKDYLLMEQEFLQNYDLNQPKVDENSKE 91
Query: 353 EEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILM 532
+ D +++LRG P++VGNLEE+ID+NHAIVSS+VGPE+YV I+SFVDK +L G +L+
Sbjct: 92 QADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLL 151
Query: 533 HNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYE 712
+NK LSVVG++ EVDPMV+VMKVEKAP ESY+DIGGL+AQ+QE+KEA+ELPLTHPELYE
Sbjct: 152 NNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYE 211
Query: 713 DIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFR 892
+IGI+PPKGVILYGEPGTGKTLLAKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELFR
Sbjct: 212 EIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR 271
Query: 893 VADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATN 1072
VAD+ +PSIVFIDEIDAVGTKRYD+ SGGEREIQRTMLELLNQLDGFD+R DVKVI+ATN
Sbjct: 272 VADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATN 331
Query: 1073 RIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSG 1252
RIE+LDPAL+RPGRIDRKIEFPLPDIKT+R+IF+IHT++M L++DVNLEEFVM+KD+ SG
Sbjct: 332 RIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSG 391
Query: 1253 ADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
ADIKAICTE+GLLALRERRM+VTH DF G PEGLYM
Sbjct: 392 ADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTAGAPEGLYM 439
>sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog
OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1
Length = 448
Score = 587 bits (1512), Expect = 9e-167
Identities = 299/447 (66%), Positives = 361/447 (80%), Gaps = 7/447 (1%)
Frame = +2
Query: 59 MGQGTPGGLNR--QGLPGDRKPDGNDXXXXXXXXXXXXXRVGRKQRK-QKGPEAAARLPT 229
MGQ G + G GD K D R GR+++K Q GP+A+A+LPT
Sbjct: 1 MGQAQSGNFSNFGDGANGDNKKD--QKKDKPKYEPPVPTRTGRRKKKAQSGPDASAKLPT 58
Query: 230 VTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGN 409
V P T+C+LRLLK++RI D+LLMEEE+V NQERLKPQ+E+ +E+R++VD++RG+PMSVG
Sbjct: 59 VIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQERLKPQDERTQEERNRVDEIRGTPMSVGT 118
Query: 410 LEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMV 589
LEE+ID++HAIVS++ GPEYYV I+SFVDKD LEPGC++L+H+K +S+VGLL D+ DPM+
Sbjct: 119 LEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMI 177
Query: 590 SVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTG 769
+VMK++KAP ESYADIGGL++QIQEIKEAVELPLTHPELYE++GI+PPKGVILYG PGTG
Sbjct: 178 NVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTG 237
Query: 770 KTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVG 949
KTLLAKAVAN TSATFLRVVGSELIQKYLGDGP+LVR+LF A++ SPSIVFIDEIDA+G
Sbjct: 238 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIG 297
Query: 950 TKRYDAHSGGEREIQRTMLELLNQLDGFD-SRGDVKVILATNRIESLDPALLRPGRIDRK 1126
TKRYDA SG EREIQRTMLELLNQLDGFD S+ D+KVI+ATNRI LDPAL+RPGRIDRK
Sbjct: 298 TKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRK 357
Query: 1127 IEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 1306
I F PD T+R+IF IHTS+M L +DVNLEE + KD+ SGA+IKAI +EAGLLALRER
Sbjct: 358 ILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRER 417
Query: 1307 RMKVTHADFXXXXXXXXXXXXEGVPEG 1387
RM+V DF EG P G
Sbjct: 418 RMRVVMDDFRQAREKVLKTKDEGGPAG 444
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae GN=RPT2 PE=1 SV=3
Length = 437
Score = 577 bits (1487), Expect = 7e-164
Identities = 280/409 (68%), Positives = 352/409 (86%), Gaps = 1/409 (0%)
Frame = +2
Query: 170 RVGRKQRKQKGPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEK 349
+ GRK+RK GP A +LP + P T+CKL+LL++ERIKD+LL+EEEFV+N E LKP E+K
Sbjct: 30 KFGRKKRK-GGPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKK 88
Query: 350 AEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAIL 529
EE++ +++++RG+P+S+G LEE+ID++HAIV+S P+YYV ILSFVDK+ LEPGC++L
Sbjct: 89 QEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVL 148
Query: 530 MHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELY 709
+H+K +S+VG+LQD+ DPMVSVMK++K+P ESY+DIGGL++QIQEIKE+VELPLTHPELY
Sbjct: 149 LHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELY 208
Query: 710 EDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 889
E++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLR+VGSELIQKYLGDGP+L R++F
Sbjct: 209 EEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIF 268
Query: 890 RVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILAT 1069
+VA + +PSIVFIDEIDA+GTKRYD++SGGEREIQRTMLELLNQLDGFD RGDVKVI+AT
Sbjct: 269 KVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMAT 328
Query: 1070 NRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFS 1249
N+IE+LDPAL+RPGRIDRKI F PD+ T+++I IHTS+M L++DVNLE V TKD+ S
Sbjct: 329 NKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLS 388
Query: 1250 GADIKAICTEAGLLALRERRMKVTHADFXXXXXXXXXXXXEGVPEGLYM 1396
GADI+A+CTEAGLLALRERRM+VT DF E EGLY+
Sbjct: 389 GADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL 437
>sp|P46507|PRS6B_MANSE 26S protease regulatory subunit 6B OS=Manduca sexta PE=2
SV=1
Length = 415
Score = 387 bits (993), Expect = 1e-106
Identities = 193/379 (50%), Positives = 275/379 (72%), Gaps = 8/379 (2%)
Frame = +2
Query: 200 GPEAAARLPTVTPLTKCKLRLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVD 376
GP+ L + TK K KL+R+ ++L ++EE++ +++R LK + A+E+ ++
Sbjct: 25 GPQTFDELESEDLYTKYK----KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 80
Query: 377 DLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVV 556
+ P+ +G E +D+N IV S+ G YYV ILS +D++ L+P ++ +H ++V
Sbjct: 81 SV---PLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALV 137
Query: 557 GLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPK 736
+L E D +S+++ ++ P Y+DIGG+D Q QEI+EAVELPLTH ELY IGI PP+
Sbjct: 138 DVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 197
Query: 737 GVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPS 916
GV++YG PG GKT+LA AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + SP+
Sbjct: 198 GVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPA 257
Query: 917 IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPA 1096
I+FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPA
Sbjct: 258 IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 317
Query: 1097 LLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICT 1276
LLRPGR+DRKIEFPLPD + +R IF T++M L+++V+LEEFV D SGADI AIC
Sbjct: 318 LLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQ 377
Query: 1277 EAGLLALRERRMKVTHADF 1333
EAG+ A+RE R V DF
Sbjct: 378 EAGMNAVRENRYIVLPKDF 396
>sp|P46502|PRS6B_CAEEL Probable 26S protease regulatory subunit 6B
OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1
Length = 414
Score = 385 bits (988), Expect = 5e-106
Identities = 189/360 (52%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 254 LRLLKLERIKDYLLMEEEFVTNQER-LKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDE 430
++L LER +L + E+++ + R L+ + A+E+ ++ + P+ +G E +D+
Sbjct: 38 IKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSV---PLVIGQFLEAVDQ 94
Query: 431 NHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEK 610
NHAIV S+ G YYV +LS +D++ L+PGC++ +H ++V +L E D + +++ ++
Sbjct: 95 NHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDE 154
Query: 611 APLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKA 790
P SY DIGGLD Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKA
Sbjct: 155 KPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKA 214
Query: 791 VANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAH 970
VA +T+A+F+RVVGSE +QKYLG+GP++VR++FR+A + SPSI+FIDEIDA+ TKR+DA
Sbjct: 215 VAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQ 274
Query: 971 SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI 1150
+G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD
Sbjct: 275 TGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDR 334
Query: 1151 KTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHAD 1330
+ +R +F SRM L+DDV+LE++V D+ SGADI +IC EAG+ A+RE R V D
Sbjct: 335 RQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKD 394
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis
thaliana GN=RPT3 PE=2 SV=1
Length = 408
Score = 380 bits (975), Expect = 2e-104
Identities = 185/360 (51%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
RL LER ++ ++EE+V + Q+ LK + +A+E+ ++ + P+ +G E++D+N
Sbjct: 33 RLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQN 89
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
+ IV S+ G YYV ILS ++++ L+P ++ +H ++V +L E D +S++ +
Sbjct: 90 NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEK 149
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P SY DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 150 PDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 209
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
AN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +
Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 269
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 270 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R +FQ+ TS+M L+D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF
Sbjct: 330 QKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 389
>sp|O28303|PSMR_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus
fulgidus GN=pan PE=3 SV=1
Length = 398
Score = 380 bits (974), Expect = 2e-104
Identities = 190/365 (52%), Positives = 266/365 (72%), Gaps = 2/365 (0%)
Frame = +2
Query: 239 LTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEE 418
L K + KL + L E++F+ ER++ E + RS+V+ LR P+ VG + +
Sbjct: 13 LKKLEEDYYKLRELYRRLEDEKKFI-ESERIR-YEREVRRLRSEVERLRSPPLLVGVVSD 70
Query: 419 LIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVM 598
++++ +V SS GP++ V ++++++L+PG + ++ + L++V +L DPMV
Sbjct: 71 ILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGF 130
Query: 599 KVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTL 778
+VE+ P SY DIGGLD QI+EI+EAVELPL PEL+ ++GI PPKGV+LYG PGTGKTL
Sbjct: 131 EVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTL 190
Query: 779 LAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR 958
LAKAVAN T ATF+RVVGSE +QKY+G+G +LVRE+F++A + +PSI+FIDE+DA+ +R
Sbjct: 191 LAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARR 250
Query: 959 YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP 1138
++ + G+RE+QRTM++LL +LDGFD RGDVKVI ATNRI+ LDPA+LRPGR DR IE P
Sbjct: 251 TNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVP 310
Query: 1139 LPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 1318
LP + R +IF+IHT +M LA+DV+ +E + SGADIKAICTEAG+ A+RE R KV
Sbjct: 311 LPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKV 370
Query: 1319 THADF 1333
T DF
Sbjct: 371 TMLDF 375
>sp|Q3T030|PRS6B_BOVIN 26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4
PE=2 SV=1
Length = 418
Score = 379 bits (972), Expect = 4e-104
Identities = 185/360 (51%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
R KL++ ++L ++EE++ + Q+ LK + A+E+ ++ + P+ +G E +D+N
Sbjct: 43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQN 99
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV S+ G YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++
Sbjct: 100 TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQK 159
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
>sp|P43686|PRS6B_HUMAN 26S protease regulatory subunit 6B OS=Homo sapiens
GN=PSMC4 PE=1 SV=2
Length = 418
Score = 379 bits (972), Expect = 4e-104
Identities = 185/360 (51%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
R KL++ ++L ++EE++ + Q+ LK + A+E+ ++ + P+ +G E +D+N
Sbjct: 43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQN 99
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV S+ G YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++
Sbjct: 100 TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQK 159
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
>sp|Q4R7L3|PRS6B_MACFA 26S protease regulatory subunit 6B OS=Macaca fascicularis
GN=PSMC4 PE=2 SV=1
Length = 418
Score = 379 bits (972), Expect = 4e-104
Identities = 185/360 (51%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
R KL++ ++L ++EE++ + Q+ LK + A+E+ ++ + P+ +G E +D+N
Sbjct: 43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQN 99
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV S+ G YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++
Sbjct: 100 TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQK 159
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
>sp|Q63570|PRS6B_RAT 26S protease regulatory subunit 6B OS=Rattus norvegicus
GN=Psmc4 PE=1 SV=1
Length = 418
Score = 379 bits (972), Expect = 4e-104
Identities = 185/360 (51%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
R KL++ ++L ++EE++ + Q+ LK + A+E+ ++ + P+ +G E +D+N
Sbjct: 43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQN 99
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV S+ G YYV ILS +D++ L+P ++ +H ++V +L E D + ++ ++
Sbjct: 100 TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQK 159
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IF TS+M L+++V+LE++V D+ SGADI +IC E+G+LA+RE R V DF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDF 399
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum
tuberosum PE=2 SV=1
Length = 413
Score = 372 bits (954), Expect = 4e-102
Identities = 180/360 (50%), Positives = 269/360 (74%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTNQ-ERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
RL L+R +++ ++EE+V ++ + L+ + +A+E+ ++ + P+ +G E+ID+N
Sbjct: 38 RLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSV---PLVIGQFMEMIDQN 94
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
+AIV S+ G YYV ILS ++++ L+P ++ + ++V +L E D +S++ +
Sbjct: 95 NAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEK 154
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P +Y DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 155 PDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 214
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +
Sbjct: 215 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 274
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 275 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 334
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R +FQ+ T++M L D+V+LE++V D+ S A+I AIC EAG+ A+R+ R + DF
Sbjct: 335 QKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDF 394
>sp|P54775|PRS6B_MOUSE 26S protease regulatory subunit 6B OS=Mus musculus
GN=Psmc4 PE=1 SV=1
Length = 418
Score = 369 bits (946), Expect = 4e-101
Identities = 180/360 (50%), Positives = 266/360 (73%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
R KL++ ++L ++EE++ + Q+ LK + A+E+ ++ + P+ +G E +D+N
Sbjct: 43 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQN 99
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV+S+ G YYV ++S +D++ L+P ++ +H ++V +L D + ++ ++
Sbjct: 100 TAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQK 159
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P YADIGG+D Q QE++EAVELPLTH ELY+ IGI PP+GV++YG PG GKT+LAKAV
Sbjct: 160 PDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAV 219
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDEIDA+ TKR+DA +
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 280 GADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IF TS+M L+++V+LE++V D+ SGADI +IC G+LA+RE V DF
Sbjct: 340 QKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDF 399
>sp|P34123|PRS6B_DICDI 26S protease regulatory subunit 6B homolog
OS=Dictyostelium discoideum GN=psmC4 PE=2 SV=1
Length = 403
Score = 368 bits (944), Expect = 6e-101
Identities = 185/360 (51%), Positives = 265/360 (73%), Gaps = 4/360 (1%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTNQ-ERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
++ LE D+ ++EE++ + + LK + A+E+ V +R P+ +G L E++D N
Sbjct: 28 KMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEE---VKRIRSVPLLIGQLLEMVDSN 84
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
IV S+ G V ILS +D++ L+P ++ + ++V L E D + ++ ++
Sbjct: 85 TGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEK 144
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P ESY+DIGG D Q QE++EAVELPLTH LY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 145 PSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 204
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
A+ TSA F+RVVGSE +QKYLG+GP+LVR++FR+A + SP+I+FIDEIDA+ TKR+DA +
Sbjct: 205 AHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 264
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
G +RE+QR ++ELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 265 GADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R IFQ+ TS+M L+D+V+LE++V D+ SGA+I++IC EAG+ A+R+ R + DF
Sbjct: 325 QKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDF 384
>sp|Q8SQI9|PRS6B_ENCCU 26S protease regulatory subunit 6B homolog
OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=3 SV=1
Length = 387
Score = 361 bits (926), Expect = 8e-099
Identities = 181/360 (50%), Positives = 252/360 (70%), Gaps = 2/360 (0%)
Frame = +2
Query: 254 LRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 433
+R ++ER L + E +V + +EE+ R ++D ++ P+ +G E ID +
Sbjct: 11 VRYKQMERKLRLLEIREGYVRKEIETLKREER--HSREELDRVKSVPLIMGQFLEPIDSS 68
Query: 434 HAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 613
AIV S+ G + V ILS VD++ L+P + +H ++VG+L EVD + VM +
Sbjct: 69 TAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEK 128
Query: 614 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 793
P +Y D+GGLD Q QEIKE VELPL +LY IGI PP+GV+LYG PGTGKT+L KAV
Sbjct: 129 PSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAV 188
Query: 794 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 973
AN T ATF+RV GSE +QKYLG+GP++VR++FR+A + +PSIVFIDE+D++ TKR+DA +
Sbjct: 189 ANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDAST 248
Query: 974 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 1153
+RE+QR ++ELLNQ+DGFD +VKVI+ATNR +++DPALLRPGR+DRKIEFPLPD +
Sbjct: 249 SADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRR 308
Query: 1154 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+R +F TS+M+L D V++E V ++ S ADI +IC EAG+LA+R R VT DF
Sbjct: 309 QKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDF 368
>sp|Q58576|PSMR_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus
jannaschii GN=pan PE=1 SV=1
Length = 430
Score = 359 bits (921), Expect = 3e-098
Identities = 186/362 (51%), Positives = 257/362 (70%), Gaps = 4/362 (1%)
Frame = +2
Query: 251 KLRLLKLE-RIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELID 427
K R+ +LE RI L ++E +E L+ +E E R ++D +R P+ VG + + +
Sbjct: 46 KARIAELESRILKLELEKKEL--ERENLQLMKEN-EILRRELDRMRVPPLIVGTVVDKVG 102
Query: 428 ENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVE 607
E +V SS GP + V + FV+ D L PG + ++ + L+VV +L + D M+V+
Sbjct: 103 ERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVD 162
Query: 608 KAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAK 787
+ P Y DIGGL+ Q+QEI+E VELPL HPEL+E +GI PPKG++LYG PGTGKTLLAK
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 788 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA 967
AVA T+ATF+RVVGSEL++K++G+G LV+++F++A + +PSI+FIDEIDA+ KR DA
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 968 HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPD 1147
+GG+RE+QRT+++LL ++DGFD+RGDVK+I ATNR + LDPA+LRPGR DR IE P PD
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 1148 IKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHA 1327
K R I +IHT +M LA+DVNLEE + GA++KAICTEAG+ A+RE R VT
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMD 402
Query: 1328 DF 1333
DF
Sbjct: 403 DF 404
>sp|O26824|PSMR_METTH Proteasome-activating nucleotidase OS=Methanobacterium
thermoautotrophicum GN=pan PE=3 SV=1
Length = 410
Score = 359 bits (921), Expect = 3e-098
Identities = 181/359 (50%), Positives = 257/359 (71%), Gaps = 9/359 (2%)
Frame = +2
Query: 257 RLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENH 436
++ KLE KD LL+E E + RL + + + R +++ R P+ + + E++D++
Sbjct: 36 KIRKLE--KDKLLIENE----RTRL---DREVKSLRGEIERFRTPPLVIATVTEVLDDHR 86
Query: 437 AIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAP 616
V S+ GP + + F+D+ QLEPG + ++ + S+V +L E DP+V+ M+VE+ P
Sbjct: 87 VAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKP 146
Query: 617 LESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVA 796
SY IGGL+ Q++E+KE VELPL PEL+E IGI PPKGV+LYG PGTGKTLLAKAVA
Sbjct: 147 DVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVA 206
Query: 797 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG 976
+ T+ATF+++V SE ++KY+G+G +LVR +F +A + SPSI+FIDEIDAV KR + +
Sbjct: 207 HETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTS 266
Query: 977 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 1156
G+RE+QRT+++LL +LDGF+SRG+V ++ ATNR + LDPALLRPGR DR IE PLP+
Sbjct: 267 GDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDG 326
Query: 1157 RRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
RR I +IHTS M LA++V++E D SGAD+KAICTEAG+ A+R+ R +VT ADF
Sbjct: 327 RREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADF 385
>sp|Q8TX03|PSMR_METKA Proteasome-activating nucleotidase OS=Methanopyrus
kandleri GN=pan PE=3 SV=1
Length = 436
Score = 356 bits (913), Expect = 2e-097
Identities = 181/364 (49%), Positives = 256/364 (70%), Gaps = 1/364 (0%)
Frame = +2
Query: 245 KCKLRLLKLERIKDYLLME-EEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 421
K ++ + + ++ L ME +E +E L+ +E E+ RS + ++ P+ VG +EE+
Sbjct: 50 KLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEI 109
Query: 422 IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 601
+D+ IV SS GP++ + VD+++LEPG + ++ + ++VV +L E D V M+
Sbjct: 110 LDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAME 169
Query: 602 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 781
V+++P SY DIGGLD QI+EI+E VE PL PEL+E +G+ PPKGV+LYG PGTGKTLL
Sbjct: 170 VDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLL 229
Query: 782 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 961
AKAVAN ATF+R+ EL+QK++G+G +LVRELF +A + +PSI+FIDEIDA+G +R
Sbjct: 230 AKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRM 289
Query: 962 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 1141
+ G+RE+QRT+ +LL ++DGFD D+KVI ATNR + LDPALLRPGR DR I+ PL
Sbjct: 290 RDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPL 349
Query: 1142 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT 1321
PD + R IF+IHT M LA+DV+L++ + SGADIKAICTEAG++A+RE R VT
Sbjct: 350 PDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVT 409
Query: 1322 HADF 1333
DF
Sbjct: 410 MDDF 413
>sp|A3CV35|PSMR_METMJ Proteasome-activating nucleotidase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 350 bits (897), Expect = 2e-095
Identities = 177/365 (48%), Positives = 253/365 (69%), Gaps = 2/365 (0%)
Frame = +2
Query: 239 LTKCKLRLLKLERIKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEE 418
+T + R L+L + E+ +V Q+ E + + +S+++ LR P+ +G + +
Sbjct: 25 ITNLENRNLELREQFRQMESEKRYVETQK--IRYERELRKLKSEIEQLRSPPLVIGTVTD 82
Query: 419 LIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVM 598
+ID + IV SS GP + V +D D L+PG ++ + L++V +L D + M
Sbjct: 83 VIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGM 142
Query: 599 KVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTL 778
++ ++P E+Y +IGGL+ QI+EI+EAVELPLT P+L+E +GI PPKGV+LYG PGTGKTL
Sbjct: 143 ELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTL 202
Query: 779 LAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR 958
LA+AVA+ T+A FLRVVGSEL+QKY+G+G +LVRELF +A +PSI+FIDEIDA+G R
Sbjct: 203 LARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHR 262
Query: 959 YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP 1138
D+ + G+RE+QRT+++LL ++DGFD+RGDVK++ ATNRI+ LD ALLRPGR DR IE P
Sbjct: 263 NDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIP 322
Query: 1139 LPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKV 1318
LPD + R I +IHT M + +DVNL E + +GAD++AIC EAG+ A+R R V
Sbjct: 323 LPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAV 382
Query: 1319 THADF 1333
DF
Sbjct: 383 NSEDF 387
>sp|Q0W257|PSMR_UNCMA Proteasome-activating nucleotidase OS=Uncultured
methanogenic archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 343 bits (878), Expect = 3e-093
Identities = 167/351 (47%), Positives = 245/351 (69%)
Frame = +2
Query: 281 KDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVG 460
++Y +E E + + + E + + S++D L+ P+ VG + +++ I+ SS G
Sbjct: 43 EEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTG 102
Query: 461 PEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIG 640
P++ V F++ ++ PG + ++ + L+V+ +L DP V M+V +P Y IG
Sbjct: 103 PKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIG 162
Query: 641 GLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFL 820
GL+AQI E+KE VELPL PEL++ +GI PPKGV+LYG PGTGKTLLAKAVAN T ATF+
Sbjct: 163 GLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFI 222
Query: 821 RVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRT 1000
R++GSEL+QKY+G+G ++VRELF +A + SPSI+FIDEID++G KR D+ + G+RE+QRT
Sbjct: 223 RIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRT 282
Query: 1001 MLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIH 1180
+++LL ++DGFD RG+V+++ ATNR + LDPALLRPGR DR I+ P+P + R +I +IH
Sbjct: 283 LVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIH 342
Query: 1181 TSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+M LADDV+L + + DE SGAD+ AI EAG+ A+R R V +DF
Sbjct: 343 ARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDF 393
>sp|A7I8B8|PSMR_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei
(strain 6A8) GN=pan PE=3 SV=1
Length = 436
Score = 340 bits (871), Expect = 2e-092
Identities = 169/331 (51%), Positives = 233/331 (70%)
Frame = +2
Query: 341 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC 520
E + + +S+ + LR P+ +G + +++D N IV SS GP + V V+ D ++PG
Sbjct: 82 EREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGA 141
Query: 521 AILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHP 700
++ + L++V LL D V M++ +P E Y DIGGL QI E++EAVELPL P
Sbjct: 142 RCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRP 201
Query: 701 ELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 880
EL+ IGI PPKGV+LYG PGTGKTLLAKAVA+ T+A F+RVVGSEL+QKY+G+G +LVR
Sbjct: 202 ELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVR 261
Query: 881 ELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVI 1060
ELF +A +P+I+FIDEIDAVG R +A++ G+RE+QRT+++LL +DGF++RGDVK+I
Sbjct: 262 ELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKII 321
Query: 1061 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKD 1240
ATNRI+ LD ALLRPGR DR IE PLPD + R I ++HT +T+ + VNL E +
Sbjct: 322 GATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTE 381
Query: 1241 EFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+GAD++AIC EAG+ A+R R +T DF
Sbjct: 382 GKNGADLRAICMEAGMYAIRNERPAITREDF 412
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila
melanogaster GN=Pros45 PE=1 SV=2
Length = 405
Score = 335 bits (857), Expect = 8e-091
Identities = 170/359 (47%), Positives = 249/359 (69%), Gaps = 4/359 (1%)
Frame = +2
Query: 269 LERIKDYLLMEEEFVTNQERLKPQEE----KAEEDRSKVDDLRGSPMSVGNLEELIDENH 436
+++I++ L+ E N RL+ Q K R ++ L+ VG + + +D+
Sbjct: 24 IQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 83
Query: 437 AIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAP 616
+V ++ V + +D + + P C + + N+ ++ +L ++VDP+VS+M VEK P
Sbjct: 84 VLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 143
Query: 617 LESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVA 796
+Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PGTGKTLLA+AVA
Sbjct: 144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 797 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG 976
+ T TF+RV GSEL+QK++G+G ++VRELF +A + +PSI+F+DEID++G+ R ++ SG
Sbjct: 204 HHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG 263
Query: 977 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 1156
G+ E+QRTMLELLNQLDGF++ ++KVI+ATNRI+ LDPALLRPGRIDRKIEFP P+ +
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 323
Query: 1157 RRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADF 1333
R I +IH+ +M L +NL + SGA++K +CTEAG+ ALRERR+ VT DF
Sbjct: 324 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 382
>sp|Q2FQ56|PSMR_METHJ Proteasome-activating nucleotidase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 335 bits (857), Expect = 8e-091
Identities = 167/331 (50%), Positives = 232/331 (70%)
Frame = +2
Query: 341 EEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGC 520
E + + +S+++ L+ P+ VG + ++ID +V SS GP + V + V+ L+ G
Sbjct: 57 EREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGV 116
Query: 521 AILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHP 700
++ + L++V +L D V M++ AP E+Y DIGGL+ QI EI+EAVELP+T P
Sbjct: 117 RCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRP 176
Query: 701 ELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVR 880
+L+E IGI PPKGV+LYG PGTGKTLLAKAVA+ T A FL VGSEL+QKY+G+G +LVR
Sbjct: 177 DLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVR 236
Query: 881 ELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVI 1060
ELF +A + +PSIVFIDEIDA+G R +A + G+RE+QRT+++LL +DGF+ RGDVK+I
Sbjct: 237 ELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKII 296
Query: 1061 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKD 1240
ATNRI+ LD ALLRPGR DR IE PLPD + R I ++HT M L++DV+L E +
Sbjct: 297 GATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTE 356
Query: 1241 EFSGADIKAICTEAGLLALRERRMKVTHADF 1333
+GA++ AIC EAG+ A+R+ +V DF
Sbjct: 357 GRNGAELNAICMEAGMFAIRKEHPQVDQEDF 387
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,407,642,047
Number of Sequences: 462764
Number of Extensions: 3407642047
Number of Successful Extensions: 34563130
Number of sequences better than 0.0: 0
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