BLASTX 7.6.2
Query= RU02088 /QuerySize=769
(768 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis... 137 8e-032
sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis... 131 8e-030
>sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis thaliana
GN=RPL28A PE=1 SV=1
Length = 143
Score = 137 bits (344), Expect = 8e-032
Identities = 67/91 (73%), Positives = 80/91 (87%)
Frame = -1
Query: 534 NKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNFYRP 355
NKKTV IQ KDQ+VVLATTKT+KQNKP V+KS+++KEFPRM+KAV NQVVDN+YRP
Sbjct: 53 NKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRP 112
Query: 354 DLKKAALARLSVVYRSLKVSKSGAKKRNRQA 262
DLKKAALARLS + + L+V+KSGAK+RNRQA
Sbjct: 113 DLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
Score = 84 bits (207), Expect = 6e-016
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = -2
Query: 689 MATVPGQLIWEIVKKNNSFLVKQFGRSHAGVRFSKEPNNLCNLHSYKHS 543
MATVPGQLIWEIVK NN FLVKQFGR ++ V+FSKE NNL N+HSYKHS
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHS 49
>sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis thaliana
GN=RPL28C PE=2 SV=1
Length = 143
Score = 131 bits (327), Expect = 8e-030
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = -1
Query: 534 NKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNFYRP 355
NKKTV IQ GKDQ VVL TTKT++QNKP V+KS+++KEF RM+K V NQVVDN+YRP
Sbjct: 53 NKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRP 112
Query: 354 DLKKAALARLSVVYRSLKVSKSGAKKRNRQA 262
DLKKAALARLS + + L+V+KSG K+RNRQA
Sbjct: 113 DLKKAALARLSAISKGLRVAKSGPKRRNRQA 143
Score = 84 bits (206), Expect = 8e-016
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -2
Query: 689 MATVPGQLIWEIVKKNNSFLVKQFGRSHAGVRFSKEPNNLCNLHSYKHS 543
MATVPGQLIWEIVK+NN FLVKQFGR +A V+FSKE NNL N++SYKHS
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHS 49
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,407,642,047
Number of Sequences: 462764
Number of Extensions: 3407642047
Number of Successful Extensions: 34563130
Number of sequences better than 0.0: 0
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