BLASTX 7.6.2
Query= RU02210 /QuerySize=561
(560 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O82221|RUXG_ARATH Probable small nuclear ribonucleoprotein G ... 147 6e-035
sp|P24715|RUXG_MEDSA Probable small nuclear ribonucleoprotein G ... 136 8e-032
sp|Q9VXE0|RUXG_DROME Probable small nuclear ribonucleoprotein G ... 89 1e-017
sp|Q3ZBL0|RUXG_BOVIN Small nuclear ribonucleoprotein G OS=Bos ta... 88 2e-017
sp|P62308|RUXG_HUMAN Small nuclear ribonucleoprotein G OS=Homo s... 88 2e-017
sp|P62309|RUXG_MOUSE Small nuclear ribonucleoprotein G OS=Mus mu... 88 2e-017
sp|Q9N4G9|RUXG_CAEEL Probable small nuclear ribonucleoprotein G ... 84 6e-016
sp|Q54RX0|RUXG_DICDI Probable small nuclear ribonucleoprotein G ... 83 1e-015
sp|A8MWD9|RUXGL_HUMAN Small nuclear ribonucleoprotein G-like pro... 82 2e-015
sp|O74966|RUXG_SCHPO Probable small nuclear ribonucleoprotein G ... 76 1e-013
sp|P40204|RUXG_YEAST Small nuclear ribonucleoprotein G OS=Saccha... 75 2e-013
sp|P53905|LSM7_YEAST U6 snRNA-associated Sm-like protein LSm7 OS... 55 3e-007
>sp|O82221|RUXG_ARATH Probable small nuclear ribonucleoprotein G OS=Arabidopsis
thaliana GN=At2g23930 PE=2 SV=1
Length = 80
Score = 147 bits (369), Expect = 6e-035
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -3
Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
MSRSGQPPDLKKYMDKKLQIKLNANRM+ GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 288 VIRGNSVVTVEALEPVAK 235
VIRGNS+VTVEALEPV +
Sbjct: 61 VIRGNSIVTVEALEPVGR 78
>sp|P24715|RUXG_MEDSA Probable small nuclear ribonucleoprotein G OS=Medicago
sativa GN=C29 PE=3 SV=1
Length = 81
Score = 136 bits (342), Expect = 8e-032
Identities = 68/76 (89%), Positives = 71/76 (93%)
Frame = -3
Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
MS SGQPP LKKYMDK+LQI L ANRMI+GTLRGFDQFMNLVVDNTVEVNG+EK DIGMV
Sbjct: 1 MSTSGQPPALKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 288 VIRGNSVVTVEALEPV 241
VIRGNSVVTVEALEPV
Sbjct: 61 VIRGNSVVTVEALEPV 76
>sp|Q9VXE0|RUXG_DROME Probable small nuclear ribonucleoprotein G OS=Drosophila
melanogaster GN=SmG PE=1 SV=1
Length = 76
Score = 89 bits (220), Expect = 1e-017
Identities = 44/71 (61%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDE-KTDIGMVVIRGN 274
PP++KKYMDK++ +KLN R + G LRGFD FMN+V+D+TVE D K +IGMVVIRGN
Sbjct: 6 PPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRGN 65
Query: 273 SVVTVEALEPV 241
S+V VEAL+ V
Sbjct: 66 SIVMVEALDRV 76
>sp|Q3ZBL0|RUXG_BOVIN Small nuclear ribonucleoprotein G OS=Bos taurus GN=SNRPG
PE=3 SV=1
Length = 76
Score = 88 bits (217), Expect = 2e-017
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEV-NGDEKTDIGMVVIRGN 274
PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D VE+ ++ +IGMVVIRGN
Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGN 65
Query: 273 SVVTVEALEPV 241
S++ +EALE V
Sbjct: 66 SIIMLEALERV 76
>sp|P62308|RUXG_HUMAN Small nuclear ribonucleoprotein G OS=Homo sapiens GN=SNRPG
PE=1 SV=1
Length = 76
Score = 88 bits (217), Expect = 2e-017
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEV-NGDEKTDIGMVVIRGN 274
PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D VE+ ++ +IGMVVIRGN
Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGN 65
Query: 273 SVVTVEALEPV 241
S++ +EALE V
Sbjct: 66 SIIMLEALERV 76
>sp|P62309|RUXG_MOUSE Small nuclear ribonucleoprotein G OS=Mus musculus GN=Snrpg
PE=1 SV=1
Length = 76
Score = 88 bits (217), Expect = 2e-017
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEV-NGDEKTDIGMVVIRGN 274
PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D VE+ ++ +IGMVVIRGN
Sbjct: 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGN 65
Query: 273 SVVTVEALEPV 241
S++ +EALE V
Sbjct: 66 SIIMLEALERV 76
>sp|Q9N4G9|RUXG_CAEEL Probable small nuclear ribonucleoprotein G
OS=Caenorhabditis elegans GN=snr-7 PE=2 SV=1
Length = 77
Score = 84 bits (205), Expect = 6e-016
Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGD-EKTDIGMVVIRGN 274
PP+LKKYMDK++ +KLN NR + G LRGFD FMN+V+D VE D ++GM VIRGN
Sbjct: 6 PPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGMTVIRGN 65
Query: 273 SVVTVEALEPVA 238
SVV +E E ++
Sbjct: 66 SVVIMEPKERIS 77
>sp|Q54RX0|RUXG_DICDI Probable small nuclear ribonucleoprotein G
OS=Dictyostelium discoideum GN=snrpG PE=3 SV=1
Length = 85
Score = 83 bits (203), Expect = 1e-015
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Frame = -3
Query: 447 PDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVE-VNGDEKTDIGMVVIRGNS 271
PDL K +DKKL IKLN NR + G LRGFD FMN+ + +TVE V+ EK +IGMV+IRGNS
Sbjct: 9 PDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIGMVIIRGNS 68
Query: 270 VVTVEALEPVA 238
++ +E LE +A
Sbjct: 69 ILLMEPLESMA 79
>sp|A8MWD9|RUXGL_HUMAN Small nuclear ribonucleoprotein G-like protein OS=Homo
sapiens PE=3 SV=2
Length = 76
Score = 82 bits (200), Expect = 2e-015
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEV-NGDEKTDIGMVVIRGN 274
PP+LKK+ DKK +KLN R + G LRGFD FMNLV+D VE+ ++ +IGMV IRGN
Sbjct: 6 PPELKKFTDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKNIGMVEIRGN 65
Query: 273 SVVTVEALEPV 241
S++ +EALE V
Sbjct: 66 SIIMLEALERV 76
>sp|O74966|RUXG_SCHPO Probable small nuclear ribonucleoprotein G
OS=Schizosaccharomyces pombe GN=smg1 PE=2 SV=1
Length = 77
Score = 76 bits (185), Expect = 1e-013
Identities = 36/75 (48%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = -3
Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGD-EKTDIGM 292
MS++G PDLKKY+D+++ ++LN +R + G LRG+D F+N+V+++++E D EK IG
Sbjct: 1 MSKAG-APDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVKIGS 59
Query: 291 VVIRGNSVVTVEALE 247
V IRGNSV+ +E L+
Sbjct: 60 VAIRGNSVIMIETLD 74
>sp|P40204|RUXG_YEAST Small nuclear ribonucleoprotein G OS=Saccharomyces
cerevisiae GN=SMX2 PE=1 SV=1
Length = 77
Score = 75 bits (184), Expect = 2e-013
Identities = 33/73 (45%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = -3
Query: 447 PDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTD---IGM-VVIR 280
P+LKKYMDKK+ + +N +R + G LRG+D F+N+V+D+ +E+NG++ + +G+ VIR
Sbjct: 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIR 64
Query: 279 GNSVVTVEALEPV 241
GNS++++EAL+ +
Sbjct: 65 GNSIISLEALDAI 77
>sp|P53905|LSM7_YEAST U6 snRNA-associated Sm-like protein LSm7 OS=Saccharomyces
cerevisiae GN=LSM7 PE=1 SV=2
Length = 115
Score = 55 bits (130), Expect = 3e-007
Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = -3
Query: 444 DLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEV--NGDEKTDIGMV 289
DL KY D K+++KL +++IG L+G+DQ MNLV+D+TVE N D++ + ++
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELI 82
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,407,642,047
Number of Sequences: 462764
Number of Extensions: 3407642047
Number of Successful Extensions: 34563130
Number of sequences better than 0.0: 0
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