BLASTX 7.6.2
Query= RU02359 /QuerySize=283
(282 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q55DP9|MYBP_DICDI Myb-like protein P OS=Dictyostelium discoid... 71 1e-012
sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sap... 71 1e-012
sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musc... 69 6e-012
>sp|Q55DP9|MYBP_DICDI Myb-like protein P OS=Dictyostelium discoideum GN=mybP
PE=3 SV=1
Length = 1448
Score = 71 bits (172), Expect = 1e-012
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 DSQVKLYRNSLKMPALILDKKEKIVTRFVSSNGLVEDPCAVEKERALINPWTPEEKEAFI 184
D K + +P ++ ++ I +++ NG + DP A EK+R + WT +EK+ F+
Sbjct: 1032 DPNCKYQQGVAIIPPMLSPEERNI--HYINHNGFIVDPIAQEKQRKSLIIWTEDEKQKFV 1089
Query: 185 EKLVVFGKDFKKIASFFDHKTTADCVEFYYKH 280
+K + + K F KIASFFD++TT D + FYY +
Sbjct: 1090 KKYLQYPKKFSKIASFFDNRTTEDMIVFYYNN 1121
>sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2
PE=1 SV=2
Length = 2525
Score = 71 bits (172), Expect = 1e-012
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 17 KLYRNSLKMPALILDKKEKIVTRFVSSNGLVEDPCAVEKERALINPWTPEEKEAFIEKLV 196
K R +P ++ D ++ + +F++ NGL+ DP V K+R ++N W+ +EKE F EK +
Sbjct: 387 KQMRQLAVIPPMLYDADQQRI-KFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFM 445
Query: 197 VFGKDFKKIASFFDHKTTADCVEFYY 274
K+F IASF + KT A+CV +YY
Sbjct: 446 QHPKNFGLIASFLERKTVAECVLYYY 471
>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus GN=Ncor2
PE=1 SV=2
Length = 2472
Score = 69 bits (167), Expect = 6e-012
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +2
Query: 17 KLYRNSLKMPALILDKKEKIVTRFVSSNGLVEDPCAVEKERALINPWTPEEKEAFIEKLV 196
K R +P ++ D ++ + +F++ NGL++DP V K+R + N W+ +E++ F EK +
Sbjct: 387 KQMRQLAVIPPMLYDADQQRI-KFINMNGLMDDPMKVYKDRQVTNMWSEQERDTFREKFM 445
Query: 197 VFGKDFKKIASFFDHKTTADCVEFYY 274
K+F IASF + KT A+CV +YY
Sbjct: 446 QHPKNFGLIASFLERKTVAECVLYYY 471
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,748,393,089
Number of Sequences: 462764
Number of Extensions: 3748393089
Number of Successful Extensions: 40737119
Number of sequences better than 0.0: 0
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