BLASTX 7.6.2
Query= RU02921 /QuerySize=639
(638 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O64644|SAP18_ARATH Histone deacetylase complex subunit SAP18 ... 185 2e-046
sp|Q3T022|SAP18_BOVIN Histone deacetylase complex subunit SAP18 ... 122 2e-027
sp|O00422|SAP18_HUMAN Histone deacetylase complex subunit SAP18 ... 122 2e-027
sp|Q5RDT5|SAP18_PONAB Histone deacetylase complex subunit SAP18 ... 122 2e-027
sp|O55128|SAP18_MOUSE Histone deacetylase complex subunit SAP18 ... 122 2e-027
sp|Q9VEX9|SAP18_DROME Histone deacetylase complex subunit SAP18 ... 113 9e-025
sp|Q09250|SAP18_CAEEL Probable histone deacetylase complex subun... 110 8e-024
>sp|O64644|SAP18_ARATH Histone deacetylase complex subunit SAP18 OS=Arabidopsis
thaliana GN=At2g45640 PE=1 SV=1
Length = 152
Score = 185 bits (468), Expect = 2e-046
Identities = 90/122 (73%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIA 294
EPVDREKTCPLLLRVFTK GGHH ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKE++
Sbjct: 31 EPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKDASLRELTDLVKEVS 90
Query: 293 PAARRRNAKLSFAFVYPDKGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLDV 114
AARRRNA+LSFAFVYP+ G + +++ G T AY N ++ DDSK+L+EL F+IGDYLDV
Sbjct: 91 VAARRRNARLSFAFVYPNNKGGYNVREVGETMAYPNR-KQPDDSKTLSELPFEIGDYLDV 149
Query: 113 AV 108
A+
Sbjct: 150 AI 151
>sp|Q3T022|SAP18_BOVIN Histone deacetylase complex subunit SAP18 OS=Bos taurus
GN=SAP18 PE=2 SV=1
Length = 153
Score = 122 bits (306), Expect = 2e-027
Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIA 294
+P+DREKTCPLLLRVFT G H++ D RG P E+QIYTW DATL+ELT LVKE+
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 293 PAARRRNAKLSFAFVYPD-KGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLD 117
P AR++ +FA V+ D K + +K+ G T + G G DDS +L KFQIGDYLD
Sbjct: 78 PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS-GRKG--TDDSMTLQSQKFQIGDYLD 134
Query: 116 VAV 108
+A+
Sbjct: 135 IAI 137
>sp|O00422|SAP18_HUMAN Histone deacetylase complex subunit SAP18 OS=Homo sapiens
GN=SAP18 PE=1 SV=1
Length = 153
Score = 122 bits (306), Expect = 2e-027
Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIA 294
+P+DREKTCPLLLRVFT G H++ D RG P E+QIYTW DATL+ELT LVKE+
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 293 PAARRRNAKLSFAFVYPD-KGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLD 117
P AR++ +FA V+ D K + +K+ G T + G G DDS +L KFQIGDYLD
Sbjct: 78 PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKG--TDDSMTLQSQKFQIGDYLD 134
Query: 116 VAV 108
+A+
Sbjct: 135 IAI 137
>sp|Q5RDT5|SAP18_PONAB Histone deacetylase complex subunit SAP18 OS=Pongo abelii
GN=SAP18 PE=2 SV=1
Length = 153
Score = 122 bits (306), Expect = 2e-027
Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIA 294
+P+DREKTCPLLLRVFT G H++ D RG P E+QIYTW DATL+ELT LVKE+
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 293 PAARRRNAKLSFAFVYPD-KGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLD 117
P AR++ +FA V+ D K + +K+ G T + G G DDS +L KFQIGDYLD
Sbjct: 78 PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKG--TDDSMTLQSQKFQIGDYLD 134
Query: 116 VAV 108
+A+
Sbjct: 135 IAI 137
>sp|O55128|SAP18_MOUSE Histone deacetylase complex subunit SAP18 OS=Mus musculus
GN=Sap18 PE=2 SV=1
Length = 153
Score = 122 bits (305), Expect = 2e-027
Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIA 294
+P+DREKTCPLLLRVFT G H++ D RG P E+QIYTW DATL+ELT LVKE+
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 293 PAARRRNAKLSFAFVYPD-KGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLD 117
P AR++ +FA V+ D K + +K+ G T + G G DDS +L KFQIGDYLD
Sbjct: 78 PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS-GRKG--TDDSMTLQSQKFQIGDYLD 134
Query: 116 VAV 108
+A+
Sbjct: 135 IAI 137
>sp|Q9VEX9|SAP18_DROME Histone deacetylase complex subunit SAP18 OS=Drosophila
melanogaster GN=Bin1 PE=1 SV=1
Length = 150
Score = 113 bits (282), Expect = 9e-025
Identities = 55/121 (45%), Positives = 83/121 (68%), Gaps = 5/121 (4%)
Frame = -1
Query: 467 VDREKTCPLLLRVFTKIGGHHNQEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEIAPA 288
+DREKTCP+LLRVF G HH+ ++ + G P +E+QIYTW+DATL ELT LV+++ P
Sbjct: 18 IDREKTCPMLLRVFCSTGRHHSVSEY-MFGNVPTNELQIYTWQDATLHELTSLVRDVNPD 76
Query: 287 ARRRNAKLSFAFVYPD-KGGRFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDYLDVA 111
R++ FA VYP+ + F +++ G+T G G +DD+K+L + KF IGD+LD++
Sbjct: 77 TRKKGTYFDFAVVYPNFRSNHFQMREIGVT-CTGQKG--IDDNKTLAQAKFSIGDFLDIS 133
Query: 110 V 108
+
Sbjct: 134 I 134
>sp|Q09250|SAP18_CAEEL Probable histone deacetylase complex subunit SAP18
OS=Caenorhabditis elegans GN=C16C10.4 PE=2 SV=1
Length = 166
Score = 110 bits (274), Expect = 8e-024
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Frame = -1
Query: 473 EPVDREKTCPLLLRVFTKIGGHHNQEDFAVR--GKEPKDEVQIYTWKDATLRELTDLVKE 300
+P+DREK CP+LLRVF H+ ++ R G P E+Q++TW D +LRELT L+KE
Sbjct: 16 KPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHTWMDCSLRELTSLIKE 75
Query: 299 IAPAARRRNAKLSFAFVYPDKGG-RFVLKQAGITHAYGNMGRRLDDSKSLNELKFQIGDY 123
+ P ARR+ FA V D+G R++L+ G T N R +DD+K+L + KF++GD+
Sbjct: 76 VNPDARRKGTTFDFAIVQADRGSPRYILRDVGNT---TNGERGIDDNKTLQQCKFEVGDF 132
Query: 122 LDVAV 108
+DVA+
Sbjct: 133 VDVAI 137
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,100,050,437
Number of Sequences: 462764
Number of Extensions: 4100050437
Number of Successful Extensions: 47778554
Number of sequences better than 0.0: 0
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