BLASTX 7.6.2
Query= RU03064 /QuerySize=505
(504 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31336|PST2_GOSHI Photosystem II 5 kDa protein, chloroplastic... 84 3e-016
sp|Q39195|PST2_ARATH Photosystem II 5 kDa protein, chloroplastic... 74 4e-013
>sp|P31336|PST2_GOSHI Photosystem II 5 kDa protein, chloroplastic OS=Gossypium
hirsutum GN=PSBT PE=4 SV=1
Length = 105
Score = 84 bits (207), Expect = 3e-016
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Frame = +1
Query: 100 MASMTMTASFLASTITKPSTPR---RSLIVAKASRAPEAEKVTVEMKKGKEENSSGRRDL 270
MAS+TMT SFL++T +PR R L+VA A++ + E V + ++ K E ++GRR++
Sbjct: 1 MASITMTTSFLSTTNLTKGSPRITQRRLVVANAAKGAQVESVQMSGER-KTEGNNGRREM 59
Query: 271 IFXXXXXXXXXXXXXXXXDEPERGTPAAKKKYAPVCVTMPTARICR 408
+F EP+RG+ AKK YAPVCVTMPTARICR
Sbjct: 60 MFAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICR 104
>sp|Q39195|PST2_ARATH Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis
thaliana GN=PSBT PE=2 SV=2
Length = 103
Score = 74 bits (180), Expect = 4e-013
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Frame = +1
Query: 103 ASMTMTASFLASTITKPS-TPRRSLIVAKASRAPEAEKVTVEMKKGKEENSSGRRDLIFX 279
ASMTMTA+F + PS T R L V +AS + + V+ ++ +++ RRDL+F
Sbjct: 2 ASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK----EQSSTTMRRDLMFT 57
Query: 280 XXXXX--XXXXXXXXXXDEPERGTPAAKKKYAPVCVTMPTARICR 408
+EP+RGT AAKKKYA VCVTMPTA+ICR
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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