BLASTX 7.6.2
Query= RU03209 /QuerySize=1316
(1315 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O24412|PSD7_ARATH Probable 26S proteasome non-ATPase regulato... 549 2e-155
sp|P51665|PSD7_HUMAN 26S proteasome non-ATPase regulatory subuni... 364 9e-100
sp|P26516|PSD7_MOUSE 26S proteasome non-ATPase regulatory subuni... 364 1e-099
sp|Q3ZBD0|PSD7_BOVIN 26S proteasome non-ATPase regulatory subuni... 362 3e-099
sp|Q54WI8|PSD7_DICDI 26S proteasome non-ATPase regulatory subuni... 356 2e-097
sp|P26270|PSD7_DROME 26S proteasome non-ATPase regulatory subuni... 352 4e-096
sp|Q8WZY4|RPN8_NEUCR 26S proteasome regulatory subunit rpn-8 OS=... 293 2e-078
sp|O74440|RPN8_SCHPO 26S proteasome regulatory subunit rpn8 OS=S... 291 1e-077
sp|Q08723|RPN8_YEAST 26S proteasome regulatory subunit RPN8 OS=S... 258 5e-068
sp|Q6FMD8|RPN8_CANGA 26S proteasome regulatory subunit RPN8 OS=C... 257 1e-067
sp|Q75F44|RPN8_ASHGO 26S proteasome regulatory subunit RPN8 OS=A... 253 2e-066
sp|O04202|EIF3F_ARATH Eukaryotic translation initiation factor 3... 114 1e-024
sp|B4KBI4|EI3F1_DROMO Eukaryotic translation initiation factor 3... 114 2e-024
sp|Q6NUC2|CSN6_XENLA COP9 signalosome complex subunit 6 OS=Xenop... 105 1e-021
sp|Q07G98|CSN6_XENTR COP9 signalosome complex subunit 6 OS=Xenop... 102 5e-021
sp|Q8W1P0|CSN6B_ARATH COP9 signalosome complex subunit 6b OS=Ara... 93 3e-018
sp|B4NJR8|EI3F1_DROWI Eukaryotic translation initiation factor 3... 92 9e-018
sp|B4LZ60|EI3F1_DROVI Eukaryotic translation initiation factor 3... 91 2e-017
sp|B4JGX4|EI3F1_DROGR Eukaryotic translation initiation factor 3... 89 4e-017
sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a OS=Ara... 88 1e-016
sp|Q7L5N1|CSN6_HUMAN COP9 signalosome complex subunit 6 OS=Homo ... 82 9e-015
sp|O88545|CSN6_MOUSE COP9 signalosome complex subunit 6 OS=Mus m... 82 9e-015
sp|A7TX81|CSN6_PIG COP9 signalosome complex subunit 6 OS=Sus scr... 82 9e-015
sp|Q5REY0|CSN6_PONAB COP9 signalosome complex subunit 6 OS=Pongo... 82 9e-015
sp|A6QQ21|CSN6_BOVIN COP9 signalosome complex subunit 6 OS=Bos t... 81 1e-014
>sp|O24412|PSD7_ARATH Probable 26S proteasome non-ATPase regulatory subunit 7
OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1
Length = 308
Score = 549 bits (1413), Expect = 2e-155
Identities = 277/308 (89%), Positives = 292/308 (94%)
Frame = +1
Query: 94 MDVIKTQQISARPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNS 273
MDVIKTQQISAR IEKV+VHPLVLLSIVD+YNRVAKD+ KRVVGVLLGSS RG VDV+NS
Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60
Query: 274 YAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFT 453
YAVPFEEDDKDPSIWFLDHNYHE+M+ M KRINAKEHVVGWYSTGPKLRENDLDVH+LF
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFN 120
Query: 454 DYVPNPVLVIIDVQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 633
YVPNPVLVIIDVQPKELGIPTKAY AVEEVKENATQKSQKVFVHV +EIAAHEVEEIGV
Sbjct: 121 GYVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGV 180
Query: 634 EHLLRDVKDTTISTLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQD 813
EHLLRDVKDTTISTLATEVT KLTALKGLDARLREIRSYLDLVI+ KLPLNHEILYHLQD
Sbjct: 181 EHLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQD 240
Query: 814 VFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSK 993
VFNLLPNLNV+EL+K F+VKTNDMMLVIYLSSLIRSVIALHNLINNK+ NKEHEKAEDSK
Sbjct: 241 VFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSK 300
Query: 994 QVAVPAAA 1017
VA+PA +
Sbjct: 301 PVAIPATS 308
>sp|P51665|PSD7_HUMAN 26S proteasome non-ATPase regulatory subunit 7 OS=Homo
sapiens GN=PSMD7 PE=1 SV=2
Length = 324
Score = 364 bits (933), Expect = 9e-100
Identities = 173/289 (59%), Positives = 232/289 (80%), Gaps = 2/289 (0%)
Frame = +1
Query: 133 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDP 309
++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS + +DVSNS+AVPF+EDDKD
Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65
Query: 310 SIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIID 489
S+WFLDH+Y E MY M K++NA+E +VGWY TGPKL +ND+ ++ L Y PN VLVIID
Sbjct: 66 SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID 125
Query: 490 VQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI 669
V+PK+LG+PT+AY +VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+
Sbjct: 126 VKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTV 184
Query: 670 STLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSE 849
TL+ +T ++ LKGL+++L +IRSYL+ V KLP+NH+I+Y LQDVFNLLP++++ E
Sbjct: 185 GTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQE 244
Query: 850 LIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSKQ 996
+K F +KTND M+V+YL+SLIRSV+ALHNLINNK+ N++ EK E ++
Sbjct: 245 FVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEK 293
>sp|P26516|PSD7_MOUSE 26S proteasome non-ATPase regulatory subunit 7 OS=Mus
musculus GN=Psmd7 PE=1 SV=2
Length = 321
Score = 364 bits (932), Expect = 1e-099
Identities = 173/289 (59%), Positives = 231/289 (79%), Gaps = 2/289 (0%)
Frame = +1
Query: 133 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDP 309
++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS + +DVSNS+AVPF+EDDKD
Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65
Query: 310 SIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIID 489
S+WFLDH+Y E MY M K++NA+E +VGWY TGPKL +ND+ ++ L Y PN VLVIID
Sbjct: 66 SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID 125
Query: 490 VQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI 669
V+PK+LG+PT+AY +VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+
Sbjct: 126 VKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTV 184
Query: 670 STLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSE 849
TL+ +T ++ LKGL+++L +IRSYL+ V KLP+NH+I+Y LQDVFNLLP+ ++ E
Sbjct: 185 GTLSQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQE 244
Query: 850 LIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSKQ 996
+K F +KTND M+V+YL+SLIRSV+ALHNLINNK+ N++ EK E ++
Sbjct: 245 FVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEK 293
>sp|Q3ZBD0|PSD7_BOVIN 26S proteasome non-ATPase regulatory subunit 7 OS=Bos
taurus GN=PSMD7 PE=2 SV=1
Length = 322
Score = 362 bits (929), Expect = 3e-099
Identities = 172/289 (59%), Positives = 231/289 (79%), Gaps = 2/289 (0%)
Frame = +1
Query: 133 IEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDP 309
++KV+VHPLVLLS+VD++NR+ K +KRVVGVLLGS + +DVSNS+AVPF+EDDKD
Sbjct: 6 VQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDD 65
Query: 310 SIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIID 489
S+WFLDH+Y E MY M K++NA+E +VGWY TGPKL +ND+ ++ L Y PN VLVIID
Sbjct: 66 SVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIID 125
Query: 490 VQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI 669
V+PK+LG+PT+AY +VEEV ++ T S K F HV SEI A E EE+GVEHLLRD+KDTT+
Sbjct: 126 VKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTV 184
Query: 670 STLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSE 849
TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y LQDVFNLLP++++ E
Sbjct: 185 GTLSQRITNQVHGLKGLNSKLLDIRGYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQE 244
Query: 850 LIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSKQ 996
+K F +KTND M+V+YL+SLIRSV+ALHNLINNK+ N++ EK E ++
Sbjct: 245 FVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEK 293
>sp|Q54WI8|PSD7_DICDI 26S proteasome non-ATPase regulatory subunit 7
OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1
Length = 325
Score = 356 bits (913), Expect = 2e-097
Identities = 175/292 (59%), Positives = 224/292 (76%), Gaps = 1/292 (0%)
Frame = +1
Query: 145 IVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWFL 324
IVHP VLLS+VD+YNRVAKDT KRVVG LLGS+ +G VDVSN Y +PFEED+ +P+IWFL
Sbjct: 9 IVHPTVLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFL 68
Query: 325 DHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPKE 504
DHN+HE M++M K+INA+E+VVGWYSTGPK+R D D++ LF Y PNPV+VIIDV PKE
Sbjct: 69 DHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVAPKE 128
Query: 505 LGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLAT 684
LGIPTK+Y VEE+ ++ ++ + + F H+PS I A E EEI +EHLLRDVKD++IS+L T
Sbjct: 129 LGIPTKSYVTVEEINKDTSESTMR-FQHIPSSIDAVEAEEICIEHLLRDVKDSSISSLTT 187
Query: 685 EVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGF 864
++T K +LK L L+E++ YL LV D LP NH+I+ ++QD+ NL PNLN +E+ K F
Sbjct: 188 QITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEISKSF 247
Query: 865 AVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSKQVAVPAAAS 1020
AV+ ND M VIYLSS+IRS+IALHNLI NK N+E EK D P A+
Sbjct: 248 AVQNNDTMSVIYLSSMIRSIIALHNLIINKTANREAEKKADIINSTPPTTAT 299
>sp|P26270|PSD7_DROME 26S proteasome non-ATPase regulatory subunit 7
OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6
Length = 338
Score = 352 bits (902), Expect = 4e-096
Identities = 173/299 (57%), Positives = 234/299 (78%), Gaps = 7/299 (2%)
Frame = +1
Query: 109 TQQISARPIEKVIVHPLVLLSIVDNYNRVAK-DTRKRVVGVLLGS-SYRGTVDVSNSYAV 282
+Q++S + KVIVHPLVLLS+VD++NR+ K +KRVVGVLLG +G +DVSNS+AV
Sbjct: 3 SQEVS---VNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAV 59
Query: 283 PFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYV 462
PF+EDDKD S+WFLDH+Y E MY M K++NA+E VVGWY TGPKL +ND+ ++ L Y
Sbjct: 60 PFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYC 119
Query: 463 PNPVLVIIDVQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL 642
PN VLVIID +PK+LG+PT+AY +VEEV ++ + S K F HVPSEI A E EE+GVEHL
Sbjct: 120 PNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTS-KTFEHVPSEIGAEEAEEVGVEHL 178
Query: 643 LRDVKDTTISTLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFN 822
LRD+KDTT+ +L+ ++T +L LKGL+A+LR+I+ YL V D K+P+NH+I+Y LQD+FN
Sbjct: 179 LRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFN 238
Query: 823 LLPNLNVSELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAE-DSKQ 996
LLP++ + VKTND MLV+YL+S++RS+IALHNLINNK+ N++ E+ + DSK+
Sbjct: 239 LLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANRDAEEGKSDSKE 297
>sp|Q8WZY4|RPN8_NEUCR 26S proteasome regulatory subunit rpn-8 OS=Neurospora
crassa GN=rpn-8 PE=3 SV=1
Length = 352
Score = 293 bits (749), Expect = 2e-078
Identities = 144/235 (61%), Positives = 183/235 (77%), Gaps = 3/235 (1%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVA--KDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
V V PLVLLS+VD+YNR K KRVVGVLLG + V VSNS+AVPFEEDDKDPS+
Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQNDGKNVRVSNSFAVPFEEDDKDPSV 75
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQ 495
WFLDHNY E+M M K++NA+E ++GWY +GPKLR +DLD++ LF Y PNP+LVI+DVQ
Sbjct: 76 WFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFKRYTPNPLLVIVDVQ 135
Query: 496 PKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTIST 675
PKE G+PT AY AV+E+K++ T S K FVH PS I A E EEIGVEHLLRD++D + T
Sbjct: 136 PKETGVPTDAYFAVDEIKDDGTTTS-KTFVHTPSIIEAEEAEEIGVEHLLRDIRDVAVGT 194
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLN 840
L+T +T ++ +L+GL RLR+I++YL V+D +LP+NH IL +LQDVFNLLPNL+
Sbjct: 195 LSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAILGNLQDVFNLLPNLS 249
Score = 59 bits (141), Expect = 6e-008
Identities = 25/51 (49%), Positives = 39/51 (76%)
Frame = +1
Query: 844 SELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMQNKEHEKAEDSKQ 996
SEL ++KTND ++ IYLSSLIR++ A H+LI NK+QN++ ++ D+K+
Sbjct: 264 SELNHAMSIKTNDQLMAIYLSSLIRAITAFHDLIENKIQNRQQQEENDAKK 314
>sp|O74440|RPN8_SCHPO 26S proteasome regulatory subunit rpn8
OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1
Length = 324
Score = 291 bits (743), Expect = 1e-077
Identities = 138/234 (58%), Positives = 184/234 (78%), Gaps = 1/234 (0%)
Frame = +1
Query: 136 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
++VIVHPLVLLS VD+YNR AK T++RVVG+LLG + V+V+NSYA+PFEED+K+ S+
Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQ 495
WFLDHN+ E+M M K+INA E +VGWY TGP+LR +DL++++L Y+PNPVLVIIDV+
Sbjct: 75 WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVK 134
Query: 496 PKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTIST 675
PK +G+PT AY A++E++++ + KS + FVH+PS I A E EEIGVEHLLRD +D ++ T
Sbjct: 135 PKSVGLPTNAYFAIDEIEDDGS-KSSRTFVHLPSSIEAEEAEEIGVEHLLRDTRDASVGT 193
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 837
LAT VT + +L+GL RL EI YL V+D +LP+NH IL LQ VFNLLPN+
Sbjct: 194 LATRVTQQAQSLQGLGQRLTEIADYLRKVVDGQLPINHAILAELQSVFNLLPNI 247
>sp|Q08723|RPN8_YEAST 26S proteasome regulatory subunit RPN8 OS=Saccharomyces
cerevisiae GN=RPN8 PE=1 SV=3
Length = 338
Score = 258 bits (659), Expect = 5e-068
Identities = 125/239 (52%), Positives = 174/239 (72%), Gaps = 2/239 (0%)
Frame = +1
Query: 136 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
EKV + PLVLLS +D+Y R KR VGV+LG + T+ V+NS+A+PFEED+K+ +
Sbjct: 6 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDV 65
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVP-NPVLVIIDV 492
WFLDHNY E M M K+INAKE ++GWY +GPKLR +DL ++ LF Y NP+L+I+DV
Sbjct: 66 WFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDV 125
Query: 493 QPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTIS 672
+ + +G+PT AY A+E+VK++ T ++K F+H+P I A E EEIGVEHLLRDV+D
Sbjct: 126 KQQGVGLPTDAYVAIEQVKDDGT-STEKTFLHLPCTIEAEEAEEIGVEHLLRDVRDQAAG 184
Query: 673 TLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSE 849
L+ +T +L +LKGL ++L+++ YLD VI+++LP+NH IL LQDVFNLLPNL +
Sbjct: 185 GLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLGTPD 243
Score = 54 bits (128), Expect = 2e-006
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +1
Query: 730 LREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSS 909
L +++ +L+ + P + EI D N+ NL K VKTND ++VIY+S+
Sbjct: 226 LGKLQDVFNLLPNLGTPDDDEIDVENHDRINISNNLQ-----KALTVKTNDELMVIYISN 280
Query: 910 LIRSVIALHNLINNKMQNKE-HEKAEDSKQVAV 1005
L+RS+IA +LI NK+QNK+ E+ KQ V
Sbjct: 281 LVRSIIAFDDLIENKIQNKKIQEQRVKDKQSKV 313
>sp|Q6FMD8|RPN8_CANGA 26S proteasome regulatory subunit RPN8 OS=Candida glabrata
GN=RPN8 PE=3 SV=1
Length = 329
Score = 257 bits (656), Expect = 1e-067
Identities = 128/252 (50%), Positives = 180/252 (71%), Gaps = 3/252 (1%)
Frame = +1
Query: 136 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
+ V + PLVLLS++D+Y R KR VGV+LG S T+ V+NS+A+PFEED+K+ +
Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTNTIRVTNSFALPFEEDEKNSDV 65
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVP-NPVLVIIDV 492
WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL ++ LF Y NP+L+I+DV
Sbjct: 66 WFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQGNPLLLIVDV 125
Query: 493 QPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTIS 672
+ +++G+PT AY AVE+VK++ T ++K F+H+P + A E EEIGVEHLLRDV+D
Sbjct: 126 KQQDVGLPTDAYMAVEQVKDDGT-STEKTFLHLPCTVEAEEAEEIGVEHLLRDVRDQAAG 184
Query: 673 TLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSEL 852
L+ +T +L +LKGL +L +I YL+ VI+ +LP+NH IL LQDVFNLLPNL +E
Sbjct: 185 GLSIRLTNQLKSLKGLQKKLNDIVIYLNKVINNELPVNHTILGKLQDVFNLLPNLGYNE- 243
Query: 853 IKGFAVKTNDMM 888
+ +NDM+
Sbjct: 244 ETDVSATSNDMV 255
>sp|Q75F44|RPN8_ASHGO 26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii
GN=RPN8 PE=3 SV=1
Length = 326
Score = 253 bits (646), Expect = 2e-066
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Frame = +1
Query: 136 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
E+V V PLVLLS++D+Y R+ KR VGVLLG + T+ V+NS+A+PFEED+K+P +
Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDV 65
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVP-NPVLVIIDV 492
WFLDHNY E M M K+INAKE ++GWY +GPKLR +DL ++ LF Y N +L+I+DV
Sbjct: 66 WFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDV 125
Query: 493 QPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTIS 672
+ + +G+PT AY A+EEVK++ + +++ FVH+P+ I A E EEIGVEHLLRDV+D
Sbjct: 126 KQQGVGLPTDAYMAIEEVKDDGS-STERTFVHLPTAIEAEEAEEIGVEHLLRDVRDQAAG 184
Query: 673 TLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 837
L+ +T +L +L+GL +LR+I +YLD V +LP NH IL LQDVFNLLPNL
Sbjct: 185 NLSLRLTNQLKSLQGLQRKLRDIVAYLDKVNSGQLPANHIILGKLQDVFNLLPNL 239
>sp|O04202|EIF3F_ARATH Eukaryotic translation initiation factor 3 subunit F
OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1
Length = 293
Score = 114 bits (285), Expect = 1e-024
Identities = 76/271 (28%), Positives = 134/271 (49%), Gaps = 17/271 (6%)
Frame = +1
Query: 148 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSY-RGTVDVSNSYAVPFEEDDKDPSIWFL 324
+HPLV+ ++ D + R D+ +RV+G LLGS GTVD+ NSYAVP E ++
Sbjct: 30 IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV--- 85
Query: 325 DHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPKE 504
D +YH M + ++N+KE +VGWYSTG + +H + VPNP+ + +D
Sbjct: 86 DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTN 145
Query: 505 LGIPTKAYCAVEEVKENATQKSQKVFVH---VPSEIAAHEVEEIGVEHLLRDVKDTTIST 675
KA+ V N + +++ H +P ++ + E +G + L K T++
Sbjct: 146 GEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVDK 196
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
L ++ G ++ L + ++ Y+D V+ ++ ++ I + D LP L
Sbjct: 197 LPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFD 256
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
D +L++YLSS+ R+ ++L +N
Sbjct: 257 NLVNDSLQDQLLLLYLSSITRTQLSLAEKLN 287
>sp|B4KBI4|EI3F1_DROMO Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 114 bits (284), Expect = 2e-024
Identities = 76/273 (27%), Positives = 144/273 (52%), Gaps = 17/273 (6%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWF 321
V VHP+VL +VD + R D+ RV+G LLGS +G V+V+N + VP +E D
Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVE--- 63
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+ +Y MY +++++NA E+VVGW++TG ++ + +H + NPV + +D +
Sbjct: 64 AELSYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQ 123
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDT 663
+ +AY ++ K+ +F +P E+ ++E E G++ L + V +
Sbjct: 124 SGRMGLRAYICIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVTVSPAHRPK 181
Query: 664 TISTL--ATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 837
T++ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 182 TVAPMLDLAQISEAATKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHM 238
Query: 838 NVSELIKGFAVKTNDMMLVIYLSSLIRSVIALH 936
+ + F D+++VI LS LI++ + L+
Sbjct: 239 THEQFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
>sp|Q6NUC2|CSN6_XENLA COP9 signalosome complex subunit 6 OS=Xenopus laevis
GN=cops6 PE=2 SV=1
Length = 318
Score = 105 bits (260), Expect = 1e-021
Identities = 71/294 (24%), Positives = 143/294 (48%), Gaps = 13/294 (4%)
Frame = +1
Query: 88 LRMDVIKTQQISARPIE---KVIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSYRG 252
+ +DV + A+ + V +HPLV+L+I D++ R+ + +V+G L+G
Sbjct: 11 MEVDVAALPSVMAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGR 70
Query: 253 TVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDL 432
++V NS+ + + +D+ +I + Y+ K++ +GWY+TG +D+
Sbjct: 71 NIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDI 127
Query: 433 DVHSLFTDYVPNPVLVIIDVQPKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAH 612
VH + + +P+ + ++ K +P Y E V + ++ + + +A
Sbjct: 128 HVHKQVCEIIESPLFLKLNPMTKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATE 184
Query: 613 EVEEIGVEHLLRDVKDTT--ISTLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLN 786
E E IGV+H+ R + ST+A + + +A+K L +R+R I Y+ ++P N
Sbjct: 185 EAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEGGEVPFN 244
Query: 787 HEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
HEIL + + LP L+ + F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 245 HEILREASALCHCLPVLSTDKFKTDFYDQCNDVGLMSYLGTITKTCNTMNQFVN 298
>sp|Q07G98|CSN6_XENTR COP9 signalosome complex subunit 6 OS=Xenopus tropicalis
GN=cops6 PE=2 SV=1
Length = 319
Score = 102 bits (254), Expect = 5e-021
Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSI 315
V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + + +++ +I
Sbjct: 33 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSQINEEKITI 92
Query: 316 WFLDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQ 495
+ Y+ K++ +GWY+TG +D+ VH + + +P+ + ++
Sbjct: 93 ---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPM 149
Query: 496 PKELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--I 669
K +P Y E V + ++ + + +A E E IGV+H+ R +
Sbjct: 150 TKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGEN 206
Query: 670 STLATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSE 849
ST+A + + +A+K L +R+R I Y+ ++P NHEIL + + LP L+ +
Sbjct: 207 STVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREASALCHCLPVLSTDK 266
Query: 850 LIKGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 267 FKMDFYDQCNDVGLMSYLGTITKTCNTMNQFVN 299
>sp|Q8W1P0|CSN6B_ARATH COP9 signalosome complex subunit 6b OS=Arabidopsis
thaliana GN=CSN6B PE=1 SV=2
Length = 317
Score = 93 bits (230), Expect = 3e-018
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 13/250 (5%)
Frame = +1
Query: 214 RVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVG 393
RV G ++G TV++ NS+ + F DP++ LD ++ E + K++ +V+G
Sbjct: 57 RVYGCVIGLQRGRTVEIFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLG 111
Query: 394 WYSTGPKLRENDLDVHSLFTDYVPNPVLVIID--VQPKELGIPTKAYCAVEEVKENATQK 567
WYSTG E+D+ +H D +PV V+++ + + +P Y + V +
Sbjct: 112 WYSTGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGI--- 168
Query: 568 SQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LATEVTGKLTALKGLDARLRE 738
Q +FVH I E E I V+H+ L+ + +T LA +TG +A+K L++R+R
Sbjct: 169 PQSIFVHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRV 228
Query: 739 IRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIR 918
+ ++ + P + +L + + LP + + F ++ ND +L+ YL+ +
Sbjct: 229 LYQHIVAMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITN 288
Query: 919 SVIALHNLIN 948
++ +++
Sbjct: 289 CTSNMNEVVD 298
>sp|B4NJR8|EI3F1_DROWI Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 92 bits (226), Expect = 9e-018
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 6/171 (3%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWF 321
V VHP+VL +VD + R D+ RV+G LLGS +G V+V+N + VP +E D
Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVE--- 63
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+ +Y MY +++++N+ E VVGW++TG ++ + +H + NPV V +D +
Sbjct: 64 AELSYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQ 123
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV 654
+ +AY ++ KS +F +P E+ ++E E G++ L + V
Sbjct: 124 GGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTV 172
>sp|B4LZ60|EI3F1_DROVI Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 91 bits (223), Expect = 2e-017
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 6/171 (3%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWF 321
V VHP+VL +VD + R D+ RV+G LLGS +G V+V+N + VP +E D
Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVE--- 63
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+ +Y MY +++++NA E VVGW++TG ++ + +H + NPV + +D +
Sbjct: 64 AELSYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQ 123
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV 654
+ +AY ++ K+ +F +P E+ ++E E G++ L + V
Sbjct: 124 GGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTV 172
>sp|B4JGX4|EI3F1_DROGR Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 89 bits (220), Expect = 4e-017
Identities = 52/171 (30%), Positives = 93/171 (54%), Gaps = 6/171 (3%)
Frame = +1
Query: 142 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWF 321
V VHP+VL +VD + R D+ RV+G LLGS +G V+V+N + VP +E D
Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVE--- 63
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+ +Y MY +++++N+ E VVGW++TG ++ + +H + NPV + +D +
Sbjct: 64 AELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQ 123
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV 654
+ +AY ++ K+ +F +P E+ ++E E G++ L + V
Sbjct: 124 GGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTV 172
>sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a OS=Arabidopsis
thaliana GN=CSN6A PE=1 SV=2
Length = 317
Score = 88 bits (217), Expect = 1e-016
Identities = 61/250 (24%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Frame = +1
Query: 214 RVVGVLLGSSYRGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHEAMYSMSKRINAKEHVVG 393
RV G ++G TV++ NS+ + + DPS LD ++ E + K++ +++G
Sbjct: 57 RVYGCVIGVQRGRTVEIFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILG 111
Query: 394 WYSTGPKLRENDLDVHSLFTDYVPNPVLVIID--VQPKELGIPTKAYCAVEEVKENATQK 567
WYSTG E+D+ +H D +PV V+++ + + +P Y + V +
Sbjct: 112 WYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI--- 168
Query: 568 SQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LATEVTGKLTALKGLDARLRE 738
Q +F H I E E I V+H+ L+ + +T LA +TG +A+K L++R+R
Sbjct: 169 PQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRV 228
Query: 739 IRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELIKGFAVKTNDMMLVIYLSSLIR 918
+ L + ++ +L + + LP + F ++ ND +L+ YL+ +
Sbjct: 229 LYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITN 288
Query: 919 SVIALHNLIN 948
++ +++
Sbjct: 289 CSSNMNEMVD 298
>sp|Q7L5N1|CSN6_HUMAN COP9 signalosome complex subunit 6 OS=Homo sapiens
GN=COPS6 PE=1 SV=1
Length = 327
Score = 82 bits (200), Expect = 9e-015
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Frame = +1
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+D Y+ K++ + +GWY+TG +D+ VH + + +P+ + ++ K
Sbjct: 100 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 159
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IST 675
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 160 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 216
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 217 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 276
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 277 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 307
>sp|O88545|CSN6_MOUSE COP9 signalosome complex subunit 6 OS=Mus musculus
GN=Cops6 PE=1 SV=1
Length = 324
Score = 82 bits (200), Expect = 9e-015
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Frame = +1
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+D Y+ K++ + +GWY+TG +D+ VH + + +P+ + ++ K
Sbjct: 97 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 156
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IST 675
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 157 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 213
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 214 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 273
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 274 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 304
>sp|A7TX81|CSN6_PIG COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6
PE=2 SV=1
Length = 323
Score = 82 bits (200), Expect = 9e-015
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Frame = +1
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+D Y+ K++ + +GWY+TG +D+ VH + + +P+ + ++ K
Sbjct: 96 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 155
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IST 675
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 156 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 212
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 213 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 272
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 273 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 303
>sp|Q5REY0|CSN6_PONAB COP9 signalosome complex subunit 6 OS=Pongo abelii
GN=COPS6 PE=2 SV=1
Length = 328
Score = 82 bits (200), Expect = 9e-015
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Frame = +1
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+D Y+ K++ + +GWY+TG +D+ VH + + +P+ + ++ K
Sbjct: 101 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 160
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IST 675
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 161 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 217
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 218 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 277
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 278 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 308
>sp|A6QQ21|CSN6_BOVIN COP9 signalosome complex subunit 6 OS=Bos taurus GN=COPS6
PE=2 SV=1
Length = 324
Score = 81 bits (199), Expect = 1e-014
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Frame = +1
Query: 322 LDHNYHEAMYSMSKRINAKEHVVGWYSTGPKLRENDLDVHSLFTDYVPNPVLVIIDVQPK 501
+D Y+ K++ + +GWY+TG +D+ VH + + +P+ + ++ K
Sbjct: 97 IDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 156
Query: 502 ELGIPTKAYCAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IST 675
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 157 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 213
Query: 676 LATEVTGKLTALKGLDARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVSELI 855
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 214 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 273
Query: 856 KGFAVKTNDMMLVIYLSSLIRSVIALHNLIN 948
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 274 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 304
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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