BLASTX 7.6.2
Query= RU03466 /QuerySize=1422
(1421 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein... 238 8e-062
sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein ... 235 9e-061
sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein... 188 1e-046
sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein... 180 2e-044
sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein... 176 4e-043
sp|Q65X92|C3H37_ORYSJ Zinc finger CCCH domain-containing protein... 173 4e-042
sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein... 171 1e-041
sp|Q94JI5|C3H10_ORYSJ Zinc finger CCCH domain-containing protein... 159 6e-038
sp|Q86B79|UNK_DROME RING finger protein unkempt OS=Drosophila me... 59 5e-008
sp|Q7XSB2|C3H29_ORYSJ Putative zinc finger CCCH domain-containin... 54 2e-006
>sp|Q6L4N4|C3H35_ORYSJ Zinc finger CCCH domain-containing protein 35 OS=Oryza
sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1
Length = 402
Score = 238 bits (606), Expect = 8e-062
Identities = 136/277 (49%), Positives = 154/277 (55%), Gaps = 39/277 (14%)
Frame = -1
Query: 1409 MMLGEPSRLAPTLKVAPWDP-FDDPTSGLGSPFSVRSPSANAGFLDSLSALHRFLPSNEX 1233
MM+GE + AP PW P SG+ S A + L L +LPSNE
Sbjct: 2 MMMGEGAH-AP-----PWQQHVASPVSGVEGGGGRESEVVAAPY-HLLDTLRHYLPSNEA 54
Query: 1232 X-------XXXXXXXXXXXXCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPR 1074
CD+FRM+EFKVRRCARGRSHDWTECP+AHPGEKARRRDPR
Sbjct: 55 AAAEDEEEAAAVAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPR 114
Query: 1073 KYHYSGSACPDFRKGNCAKGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHT 894
+Y YSG+ACPDFRKG C +GD+CEFAHGVFECWLHPARYRTQPCKDG AC RRVCFFAHT
Sbjct: 115 RYCYSGTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHT 174
Query: 893 PEQLRVLP------GHSPRTHGPGFFDXXXXXXXXXXXXXXXXXXXXXQLRLNSVSELVA 732
P+QLRVLP +SPR G G LR +
Sbjct: 175 PDQLRVLPPSQQQGSNSPRGCGGG--------GAGAAASPLAESYDGSPLRRQAFESY-- 224
Query: 731 SMRNFKLAKMQMSTTPPSWVGSGFGSP--RGPPLRPD 627
L K MS++P S + S SP PPL PD
Sbjct: 225 ------LTKSIMSSSPTSTLVSPPRSPPSESPPLSPD 255
Score = 61 bits (146), Expect = 2e-008
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Frame = -1
Query: 749 VSELVASMRNFKLAKMQMSTTPPSWVGSG--FGSPRGP--PLRPDFFSLPNTPTRNS--- 591
V+++ S+R +L + + + S++ +G +GSP+ P +SLP+TPTR S
Sbjct: 272 VNDVHVSLRQLRLGSPRSAPSCASFLPAGYQYGSPKSPAAAAAAALYSLPSTPTRLSPVT 331
Query: 590 --GRSGP----GPFDLWEHSLVEEPAMERVESGRDLRARMYAKLSKDNSMGRVDSGGFSG 429
SG P DL + EE MERVESGR LR +++ +LSK+ ++ + +G
Sbjct: 332 VTTASGATVTVEPLDL--GLIEEEQPMERVESGRALREKVFERLSKEATVSTDAAAAAAG 389
Query: 428 --PDVEWVSELVS 396
PDV WVS+L++
Sbjct: 390 VAPDVGWVSDLIN 402
>sp|Q9FU27|C3H2_ORYSJ Zinc finger CCCH domain-containing protein 2 OS=Oryza
sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1
Length = 386
Score = 235 bits (597), Expect = 9e-061
Identities = 115/193 (59%), Positives = 129/193 (66%), Gaps = 12/193 (6%)
Frame = -1
Query: 1409 MMLGEPSRLAPTLKVAPWDPFD----DPTSGLGSPFSVRSPSANAGFLDSLSALHRFLPS 1242
MM+GE P PW D G G +P A D L A + +
Sbjct: 2 MMMGEGVSSVP-----PWSHLPVSGVDVLGGGGGGGDEMTPYVIAALRDYLPANDVGVGA 56
Query: 1241 N-EXXXXXXXXXXXXXXCDQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 1065
+ E CD+FRM+EFKVRRCARGRSHDWTECP+AHPGEKARRRDPRKYH
Sbjct: 57 DEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYH 116
Query: 1064 YSGSACPDFRKGNCAKGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQ 885
YSG+ACPDFRKG C +GD+CE+AHGVFECWLHPARYRTQPCKDG AC RRVCFFAHTP+Q
Sbjct: 117 YSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQ 176
Query: 884 LRVLPGH--SPRT 852
LRVLP SPR+
Sbjct: 177 LRVLPAQQSSPRS 189
Score = 52 bits (124), Expect = 7e-006
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Frame = -1
Query: 749 VSELVASMRNFKLAKMQMSTTPPSWVGSGFGSPRGPPLRPDFFSLPNTP--------TRN 594
V++++AS R +L K++ S + S P +SLP TP T +
Sbjct: 260 VNDVLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLYSLPTTPLASTATVTTAS 319
Query: 593 SGRSGPGPFDLWEHSLVEEPAMERVESGRDLRARMYAKLSKDNSMGRVDSGGFS----GP 426
S P DL + +E ++RVESGR LR +++ +LS+D ++ D+ F+ G
Sbjct: 320 SFMPNLEPLDL--GLIGDEEPVQRVESGRALREKVFERLSRDGAISG-DATAFATAGVGL 376
Query: 425 DVEWVSELVS 396
DV+WVS+L++
Sbjct: 377 DVDWVSDLIN 386
>sp|Q10EL1|C3H24_ORYSJ Zinc finger CCCH domain-containing protein 24 OS=Oryza
sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1
Length = 764
Score = 188 bits (476), Expect = 1e-046
Identities = 77/106 (72%), Positives = 90/106 (84%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKGNCAKGD 1011
D+FRM+ FK+R C+R SHDWTECP+ HPGE ARRRDPRKYHYS CPDFRKG C +GD
Sbjct: 280 DEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGVCRRGD 339
Query: 1010 SCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
CE+AHGVFECWLHPA+YRT+ CKDG +C+RRVCFFAHT ++LR L
Sbjct: 340 MCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 385
>sp|Q2QPW2|C3H67_ORYSJ Zinc finger CCCH domain-containing protein 67 OS=Oryza
sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1
Length = 619
Score = 180 bits (456), Expect = 2e-044
Identities = 76/107 (71%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRKG-NCAKG 1014
D FRM+ FKVR C+R SHDWTECP+ HPGE ARRRDPRKYHYS CP+F+KG C +G
Sbjct: 172 DDFRMYSFKVRACSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFKKGAGCRRG 231
Query: 1013 DSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
D CE+AHGVFE WLHPA+YRT+ CKDG+ C RRVCFFAHTP++LR L
Sbjct: 232 DMCEYAHGVFESWLHPAQYRTRLCKDGVGCARRVCFFAHTPDELRPL 278
>sp|Q688R3|C3H33_ORYSJ Zinc finger CCCH domain-containing protein 33 OS=Oryza
sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1
Length = 601
Score = 176 bits (445), Expect = 4e-043
Identities = 72/107 (67%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRK-GNCAKG 1014
D+FRM+ FKV+ C+R SHDWTECP+ HPGE ARRRDPR+Y YS CP+FRK G+C KG
Sbjct: 211 DEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKG 270
Query: 1013 DSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
D+CE+AHGVFECWLHPA+YRT+ CKD + C RR+CFFAH P++LR +
Sbjct: 271 DACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELRAV 317
>sp|Q65X92|C3H37_ORYSJ Zinc finger CCCH domain-containing protein 37 OS=Oryza
sativa subsp. japonica GN=Os05g0525900 PE=2 SV=1
Length = 255
Score = 173 bits (436), Expect = 4e-042
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 3/107 (2%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRK---GNCA 1020
D+F M+EFKVRRCAR RSHDWT CPYAHPGE ARRRDPR+ Y+G CPDFR+ C
Sbjct: 57 DEFMMYEFKVRRCARARSHDWTACPYAHPGEAARRRDPRRVAYTGEPCPDFRRRPGAACP 116
Query: 1019 KGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLR 879
+G +C FAHG FE WLHP+RYRT+PC+ G+AC RRVCFFAHT +LR
Sbjct: 117 RGSTCPFAHGTFELWLHPSRYRTRPCRAGVACRRRVCFFAHTAGELR 163
>sp|Q84SL2|C3H50_ORYSJ Zinc finger CCCH domain-containing protein 50 OS=Oryza
sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1
Length = 657
Score = 171 bits (432), Expect = 1e-041
Identities = 72/111 (64%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFRK-GNCAKG 1014
D+FRMF FKVR C+R SHDWTECP+ HPGE ARRRDPRK+ Y+ CP+FR+ G C G
Sbjct: 233 DEFRMFAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNFRRPGGCPSG 292
Query: 1013 DSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVLPGHS 861
DSCEF+HGVFE WLHP++YRT+ CK+G AC RR+CFFAH ++LR +P +S
Sbjct: 293 DSCEFSHGVFESWLHPSQYRTRLCKEGAACARRICFFAHDEDELRHVPHNS 343
>sp|Q94JI5|C3H10_ORYSJ Zinc finger CCCH domain-containing protein 10 OS=Oryza
sativa subsp. japonica GN=Os01g0738400 PE=2 SV=1
Length = 225
Score = 159 bits (400), Expect = 6e-038
Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
Frame = -1
Query: 1190 DQFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFR---KGNCA 1020
+ F M+EFKVRRC R R+H+WT CPYAHPGE ARRRDP Y+G CPDFR + C
Sbjct: 43 EDFMMYEFKVRRCPRSRAHEWTSCPYAHPGEAARRRDPSHVTYTGEPCPDFRVAARAACP 102
Query: 1019 KGDSCEFAHGVFECWLHPARYRTQPCKDGLACHRRVCFFAHTPEQLRVL 873
+G C FAHG FE WLHP+RYRT+PC+ G+ C R VCFFAH ++LR++
Sbjct: 103 RGSGCPFAHGTFETWLHPSRYRTRPCRSGMLCARPVCFFAHNDKELRIV 151
>sp|Q86B79|UNK_DROME RING finger protein unkempt OS=Drosophila melanogaster
GN=unk PE=1 SV=1
Length = 599
Score = 59 bits (142), Expect = 5e-008
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Frame = -1
Query: 1160 RRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGSACPDFR-------KGNCAKGDSCE 1002
R C +G + CP H K +RR PRKY Y + CP+ + GNC GD+C+
Sbjct: 205 RLCRQGYA-----CPQYH-NSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPGNCEAGDNCQ 258
Query: 1001 FAHGVFECWLHPARYRTQPCKD---GLACHRRV-CFFAH 897
+ H E HP Y++ C D C R V C FAH
Sbjct: 259 YCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAH 297
>sp|Q7XSB2|C3H29_ORYSJ Putative zinc finger CCCH domain-containing protein 29
OS=Oryza sativa subsp. japonica GN=Os04g0487500 PE=4 SV=2
Length = 146
Score = 54 bits (129), Expect = 2e-006
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
Frame = -1
Query: 1097 KARRR-----DPRKYHYSGSACPDFRKGNCAKGDSCEFAHGVFE 981
+ RRR D R Y SG+AC DFRKG C GD+CEFAHGVF+
Sbjct: 96 RGRRRGGGTPDTRPYCDSGTACLDFRKGGCNHGDACEFAHGVFD 139
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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