BLASTX 7.6.2
Query= RU03851 /QuerySize=1014
(1013 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 114 1e-024
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 113 2e-024
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 113 3e-024
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 112 4e-024
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 110 2e-023
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 110 2e-023
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 105 5e-022
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 103 3e-021
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 90 2e-017
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 90 2e-017
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 89 5e-017
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 81 8e-015
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 80 2e-014
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 79 4e-014
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 79 4e-014
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 79 4e-014
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 79 5e-014
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 76 3e-013
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo... 74 1e-012
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong... 74 1e-012
sp|Q99069|GRP1_SORBI Glycine-rich RNA-binding protein 1 (Fragmen... 74 2e-012
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 73 2e-012
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 73 2e-012
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 73 2e-012
sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein OS=Xeno... 72 5e-012
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=... 71 1e-011
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 70 1e-011
sp|P27476|NSR1_YEAST Nuclear localization sequence-binding prote... 70 3e-011
>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana
GN=GRP7 PE=1 SV=1
Length = 176
Score = 114 bits (284), Expect = 1e-024
Identities = 51/83 (61%), Positives = 72/83 (86%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + EYRCF+GGLAW+T DR+L+ AF +YG+++++K++ D+ +GRSRGFGFVTF D+KAM
Sbjct: 3 SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
++AIE MNG DL GR+ITV++AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba
PE=2 SV=1
Length = 169
Score = 113 bits (282), Expect = 2e-024
Identities = 51/83 (61%), Positives = 71/83 (85%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + EYRCF+GGLAW+T +RSL+ AF ++G LV++K++ D+ +GRSRGFGFVTF D+K+M
Sbjct: 3 SPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSM 62
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
++AIE MNG DL GR+ITV++AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 113 bits (281), Expect = 3e-024
Identities = 50/83 (60%), Positives = 71/83 (85%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + EYRCF+GGLAW+T DR+L+ AF +YG ++++K++ D+ +GRSRGFGFVTF D+K+M
Sbjct: 3 SPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSM 62
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
++AIE MNG DL GR+ITV++AQ
Sbjct: 63 KDAIEGMNGQDLDGRSITVNEAQ 85
>sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana
GN=GRP8 PE=1 SV=1
Length = 169
Score = 112 bits (279), Expect = 4e-024
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D L+ F ++G+++++K++ D+ SGRSRGFGFVTF D+KAM +
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AIEEMNG +L GR ITV++AQ
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 110 bits (274), Expect = 2e-023
Identities = 48/81 (59%), Positives = 69/81 (85%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T+D SL++AF ++G++ ++K++ D+ +GRSRGFGFVTF D+K+M +
Sbjct: 3 EVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AIE MNG +L GR ITV++AQ
Sbjct: 63 AIEGMNGQELDGRNITVNEAQ 83
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 110 bits (273), Expect = 2e-023
Identities = 47/81 (58%), Positives = 68/81 (83%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E EYRCF+GGLAW+T D L+ F ++G ++++K++ D+ +GRSRGFGFVTF D+K+M++
Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKD 62
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI+EMNG +L GRTITV++AQ
Sbjct: 63 AIDEMNGKELDGRTITVNEAQ 83
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
OS=Zea mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 105 bits (261), Expect = 5e-022
Identities = 47/79 (59%), Positives = 64/79 (81%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
EYRCF+GGLAW+TS+ SL+ AF YG ++++KV+ D+ +GRSRGFGFVTF + +M +AI
Sbjct: 7 EYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAI 66
Query: 279 EEMNGIDLYGRTITVDKAQ 335
E MNG +L GR ITV++AQ
Sbjct: 67 ENMNGKELDGRNITVNQAQ 85
>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor
GN=GRP2 PE=2 SV=1
Length = 168
Score = 103 bits (255), Expect = 3e-021
Identities = 44/79 (55%), Positives = 66/79 (83%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
EYRCF+GGLAW+T++ +L++AF +G ++++KV+ D+ +GRSRGFGFVTF +++M +AI
Sbjct: 7 EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAI 66
Query: 279 EEMNGIDLYGRTITVDKAQ 335
E MNG +L GR ITV++AQ
Sbjct: 67 ENMNGKELDGRNITVNQAQ 85
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 90 bits (222), Expect = 2e-017
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + R ++G L+W D +LKE F + GN+V+AKVV D+ SGRSRGFGFVT+ K +
Sbjct: 203 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEV 262
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
+AI+ +NGIDL GR+I V A+
Sbjct: 263 NDAIDSLNGIDLDGRSIRVSAAE 285
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 90 bits (222), Expect = 2e-017
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
S + R ++G L+W D +LKE F + GN+V+AKVV D+ SGRSRGFGFVT+ K +
Sbjct: 202 SVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEV 261
Query: 267 EEAIEEMNGIDLYGRTITVDKAQ 335
+AI+ +NG+DL GR+I V A+
Sbjct: 262 NDAIDSLNGVDLDGRSIRVSAAE 284
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 89 bits (218), Expect = 5e-017
Identities = 42/76 (55%), Positives = 58/76 (76%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
+ FIGGL+W T D SL++AF +G++V+AKV+VD+ +GRSRGFGFV F+D+ A AI E
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 285 MNGIDLYGRTITVDKA 332
M+G +L GR I V+ A
Sbjct: 96 MDGKELNGRHIRVNPA 111
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 81 bits (199), Expect = 8e-015
Identities = 37/81 (45%), Positives = 53/81 (65%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
+P YR ++G + W D L++ F ++G +V A+VV D+ SGRSRGFGFVT + M E
Sbjct: 188 QPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSE 247
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI ++G L GRTI V+ A+
Sbjct: 248 AIANLDGQTLDGRTIRVNAAE 268
>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplastic
OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 80 bits (195), Expect = 2e-014
Identities = 34/77 (44%), Positives = 54/77 (70%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+W D +L+ F + G +VEA+V+ D+ SGRS+GFGFVT+D + ++ AI+
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 285 MNGIDLYGRTITVDKAQ 335
++G DL GR I V +A+
Sbjct: 265 LDGADLDGRQIRVSEAE 281
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 79 bits (193), Expect = 4e-014
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G LAW +L+ F + G +V+AKVV D+ SGRSRGFGFVT+ + + AIE
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254
Query: 285 MNGIDLYGRTITVDKAQ 335
++G+DL GR I V A+
Sbjct: 255 LDGVDLNGRAIRVSPAE 271
Score = 75 bits (182), Expect = 8e-013
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +3
Query: 96 PEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEA 275
P+ + F+G L +S +L E F++ GN+ +V+ DK +GRSRGFGFVT K+ +E A
Sbjct: 85 PDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 276 IEEMNGIDLYGRTITVDKAQP 338
++ NG +L GR + V+ P
Sbjct: 145 CQQFNGYELDGRALRVNSGPP 165
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 79 bits (193), Expect = 4e-014
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G LAW +L+ F + G +V+AKVV D+ SGRSRGFGFVT+ + + AIE
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248
Query: 285 MNGIDLYGRTITVDKAQ 335
++G+DL GR I V A+
Sbjct: 249 LDGVDLNGRAIRVSPAE 265
Score = 75 bits (182), Expect = 8e-013
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +3
Query: 96 PEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEA 275
P+ + F+G L +S +L E F++ GN+ +V+ DK +GRSRGFGFVT K+ +E A
Sbjct: 85 PDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAA 144
Query: 276 IEEMNGIDLYGRTITVDKAQP 338
++ NG +L GR + V+ P
Sbjct: 145 CQQFNGYELDGRALRVNSGPP 165
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 79 bits (193), Expect = 4e-014
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
EP +R ++G L W + L++ F ++G +VEA+VV D+ +GRSRGFGFVT D + E
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI ++G +L GR I V+ A+
Sbjct: 301 AISALDGQNLEGRAIRVNVAE 321
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 79 bits (192), Expect = 5e-014
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +3
Query: 105 RCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEE 284
R ++G L+W D +L+ F++ G +VEA+V+ D+ SGRS+GFGFVT + +++AI
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 285 MNGIDLYGRTITVDKAQ 335
+NG DL GR I V +A+
Sbjct: 318 LNGADLDGRQIRVSEAE 334
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 76 bits (186), Expect = 3e-013
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
E YR ++G + W D L++ F ++G +V A+VV D+ +GRSRGFGFVT + M +
Sbjct: 227 EQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSD 286
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI ++G L GRTI V+ A+
Sbjct: 287 AIANLDGQSLDGRTIRVNVAE 307
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens
GN=CIRBP PE=1 SV=1
Length = 172
Score = 74 bits (181), Expect = 1e-012
Identities = 36/78 (46%), Positives = 55/78 (70%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + F+GGL++ T+++SL++ F KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 65 MAMNGKSVDGRQIRVDQA 82
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii
GN=CIRBP PE=2 SV=1
Length = 172
Score = 74 bits (181), Expect = 1e-012
Identities = 36/78 (46%), Positives = 55/78 (70%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + F+GGL++ T+++SL++ F KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 65 MAMNGKSVDGRQIRVDQA 82
>sp|Q99069|GRP1_SORBI Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum
bicolor GN=GRP1 PE=2 SV=1
Length = 142
Score = 74 bits (179), Expect = 2e-012
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = +3
Query: 147 SLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAIEEMNGIDLYGRTITVD 326
SL AF YG ++E+K+++D+ + RSRGFGFVTF ++AM AIE MNG +L GR ITV+
Sbjct: 2 SLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61
Query: 327 KAQ 335
+AQ
Sbjct: 62 EAQ 64
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 73 bits (178), Expect = 2e-012
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + F+GGL++ T++++L++ F KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 65 MAMNGKSVDGRQIRVDQA 82
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 73 bits (178), Expect = 2e-012
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + F+GGL++ T++++L++ F KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 65 MAMNGKSVDGRQIRVDQA 82
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 73 bits (178), Expect = 2e-012
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + F+GGL++ T++++L++ F KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 5 EGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 65 MAMNGKSVDGRQIRVDQA 82
>sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein OS=Xenopus laevis
GN=cirbp PE=2 SV=1
Length = 163
Score = 72 bits (175), Expect = 5e-012
Identities = 37/78 (47%), Positives = 53/78 (67%)
Frame = +3
Query: 99 EYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEEAI 278
E + FIGGL + T++ L++AF KYG + E VV D+ + RSRGFGFVTF++ ++A+
Sbjct: 4 EGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAM 63
Query: 279 EEMNGIDLYGRTITVDKA 332
MNG + GR I VD+A
Sbjct: 64 MAMNGKSVDGRQIRVDQA 81
>sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 324
Score = 71 bits (172), Expect = 1e-011
Identities = 30/87 (34%), Positives = 55/87 (63%)
Frame = +3
Query: 72 AVYKMSEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFD 251
+ Y+ + ++ ++ L+W+ + + L++AF + AKV+ D+ SGRSRGFGF+TF
Sbjct: 207 STYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFS 266
Query: 252 DKKAMEEAIEEMNGIDLYGRTITVDKA 332
+AM A++ MN ++L GR + ++ A
Sbjct: 267 SAEAMNSALDTMNEVELEGRPLRLNVA 293
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 70 bits (171), Expect = 1e-011
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +3
Query: 93 EPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAMEE 272
EP R ++G L W L++ F ++G +V A+VV D+ +GRSRGFGFVT + + +
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205
Query: 273 AIEEMNGIDLYGRTITVDKAQ 335
AI ++G L GR + V+ A+
Sbjct: 206 AIAALDGQTLDGRAVRVNVAE 226
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein
OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1
Length = 414
Score = 70 bits (169), Expect = 3e-011
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +3
Query: 87 SEEPEYRCFIGGLAWSTSDRSLKEAFDKYGNLVEAKVVVDKFSGRSRGFGFVTFDDKKAM 266
+EEP F+G L+WS D LK+ F+ G ++ A+V+ ++ + RSRG+G+V F++K
Sbjct: 164 TEEPA-TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 222
Query: 267 EEAIEEMNGIDLYGRTITVD 326
E+AI+EM G ++ GR I D
Sbjct: 223 EKAIQEMQGKEIDGRPINCD 242
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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