BLASTX 7.6.2
Query= RU03926 /QuerySize=836
(835 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q20728|TBCB_CAEEL Tubulin-specific chaperone B OS=Caenorhabdi... 124 8e-028
sp|Q5E951|TBCB_BOVIN Tubulin folding cofactor B OS=Bos taurus GN... 104 9e-022
sp|Q99426|TBCB_HUMAN Tubulin folding cofactor B OS=Homo sapiens ... 104 1e-021
sp|Q9D1E6|TBCB_MOUSE Tubulin folding cofactor B OS=Mus musculus ... 94 1e-018
sp|Q54Z01|TBCB_DICDI Tubulin-specific chaperone B OS=Dictyosteli... 91 1e-017
sp|Q96DZ5|CLIP3_HUMAN CAP-Gly domain-containing linker protein 3... 70 1e-011
sp|Q5R686|CLIP3_PONAB CAP-Gly domain-containing linker protein 3... 70 1e-011
sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2... 68 5e-011
sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1... 67 1e-010
sp|Q9Z0H8|CLIP2_MOUSE CAP-Gly domain-containing linker protein 2... 67 1e-010
sp|O55156|CLIP2_RAT CAP-Gly domain-containing linker protein 2 O... 67 1e-010
sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1... 67 2e-010
sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1... 67 2e-010
sp|Q5U243|CLIP3_XENLA CAP-Gly domain-containing linker protein 3... 63 2e-009
sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora cra... 59 4e-008
sp|P13496|DCTN1_DROME Dynactin subunit 1 OS=Drosophila melanogas... 56 2e-007
sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCT... 53 2e-006
sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dc... 53 2e-006
sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN... 52 4e-006
sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn... 52 4e-006
sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=D... 52 4e-006
sp|Q10235|ALP11_SCHPO Cell polarity protein alp11 OS=Schizosacch... 51 9e-006
>sp|Q20728|TBCB_CAEEL Tubulin-specific chaperone B OS=Caenorhabditis elegans
GN=F53F4.3 PE=1 SV=1
Length = 229
Score = 124 bits (310), Expect = 8e-028
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 13/202 (6%)
Frame = +2
Query: 245 SNLKTFSAEIRFSLQSTVEAVKDKLWRKCGTSVNSMSLHLYDDANTKVADLADNSRPLGF 424
+N F E ++ ++ +K KL GT+V+SM + L+D + +L D ++ L
Sbjct: 11 TNATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKD 70
Query: 425 YSPLDGFRLHIIDLDPSSVTSGGW-LEDTSLVEKYTISQEAYEKRDGTFKKFKDKLASQN 601
DG+R+H +D VT G +D S+VEKY +S + Y KR + + +K K+ +
Sbjct: 71 LGVRDGYRIHAVD-----VTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAWKKKMQEEQ 125
Query: 602 TSA--VDNKIPDNFMEDLCANIKVGDRCQVEPG---DKRGVVKFVGRAESLAPGFWVGVQ 766
SA ++N+ D E+ NI VG+RC+V G +RG V +VG A G WVGV+
Sbjct: 126 GSAAPMENE-SDKLNEEAAKNIMVGNRCEVTVGAQMARRGEVAYVG-ATKFKEGVWVGVK 183
Query: 767 YDEPLGKHDGMVKGTRYFNCPP 832
YDEP+GK+DG V G RYF+C P
Sbjct: 184 YDEPVGKNDGSVAGVRYFDCDP 205
>sp|Q5E951|TBCB_BOVIN Tubulin folding cofactor B OS=Bos taurus GN=TBCB PE=2
SV=1
Length = 244
Score = 104 bits (258), Expect = 9e-022
Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 14/147 (9%)
Frame = +2
Query: 416 LGFYSPLDGFRLHIIDLDPSSVTSGGWLEDTSLVEKYTISQEAYEKRDGTFKKF--KDKL 589
LG Y DG R+H+ID + + G ED S VEKY ISQEAYE+R + + F ++KL
Sbjct: 74 LGSYPVDDGCRIHVIDHSGARL---GEYEDISKVEKYEISQEAYEQRQDSIRSFLKRNKL 130
Query: 590 ASQNTSAVDNKIPDNFM-----EDLCANIKVGDRCQVE-PGD--KRGVVKFVGRAESLAP 745
N + +N E + I VG RC+V PG +RG V +VG + P
Sbjct: 131 GRFNEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD-FKP 189
Query: 746 GFWVGVQYDEPLGKHDGMVKGTRYFNC 826
G+W+G++YDEPLGK+DG V G RYF C
Sbjct: 190 GYWIGIRYDEPLGKNDGSVNGKRYFEC 216
>sp|Q99426|TBCB_HUMAN Tubulin folding cofactor B OS=Homo sapiens GN=TBCB PE=1
SV=2
Length = 244
Score = 104 bits (257), Expect = 1e-021
Identities = 61/150 (40%), Positives = 82/150 (54%), Gaps = 20/150 (13%)
Frame = +2
Query: 416 LGFYSPLDGFRLHIIDLDPSSVTSGGWLEDTSLVEKYTISQEAYEKRDGTFKKF------ 577
LG Y DG R+H+ID + + G ED S VEKYTISQEAY++R T + F
Sbjct: 74 LGSYPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKL 130
Query: 578 ----KDKLASQNTSAVDNKIPDNFMEDLCANIKVGDRCQVE---PGDKRGVVKFVGRAES 736
+++ A Q A + ++I VG RC+V +RG V +VG +
Sbjct: 131 GRYNEEERAQQEAEAAQRLAEEKAQ---ASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD- 186
Query: 737 LAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
PG+W+GV+YDEPLGK+DG V G RYF C
Sbjct: 187 FKPGYWIGVRYDEPLGKNDGSVNGKRYFEC 216
>sp|Q9D1E6|TBCB_MOUSE Tubulin folding cofactor B OS=Mus musculus GN=Tbcb PE=1
SV=2
Length = 244
Score = 94 bits (231), Expect = 1e-018
Identities = 59/143 (41%), Positives = 80/143 (55%), Gaps = 18/143 (12%)
Frame = +2
Query: 416 LGFYSPLDGFRLHIIDLDPSSVTSGGWLEDTSLVEKYTISQEAYEKRDGTFKKF------ 577
LG Y DG R+H+I D S V G + ED S VEKY IS EAYE+R T + F
Sbjct: 74 LGSYPVDDGCRIHVI--DHSGVRLGEY-EDVSKVEKYEISPEAYERRQNTVRSFMKRSKL 130
Query: 578 ---KDKLASQNTSAVDNKIPDNFMEDLCANIKVGDRCQVEPGD---KRGVVKFVGRAESL 739
++L +Q + ++ + + + I VG RC+V D +RG V +VG +
Sbjct: 131 GPYNEELRAQQEAEAAQRLSEEKAQ--ASAISVGSRCEVRAPDHSLRRGTVMYVGLTD-F 187
Query: 740 APGFWVGVQYDEPLGKHDGMVKG 808
PG+WVGV+YDEPLGK+DG V G
Sbjct: 188 KPGYWVGVRYDEPLGKNDGSVNG 210
Score = 70 bits (170), Expect = 1e-011
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Frame = +2
Query: 575 FKDKLASQNTSAVDNKIPDNFMEDLCANIKVGDRCQVEPGD---KRGVVKFVGRAESLAP 745
+ ++L +Q + ++ + + + I VG RC+V D +RG V +VG + P
Sbjct: 133 YNEELRAQQEAEAAQRLSEEKAQ--ASAISVGSRCEVRAPDHSLRRGTVMYVGLTD-FKP 189
Query: 746 GFWVGVQYDEPLGKHDGMVKGTRYFNC 826
G+WVGV+YDEPLGK+DG V G RYF C
Sbjct: 190 GYWVGVRYDEPLGKNDGSVNGKRYFEC 216
>sp|Q54Z01|TBCB_DICDI Tubulin-specific chaperone B OS=Dictyostelium discoideum
GN=tbcb PE=3 SV=1
Length = 270
Score = 91 bits (223), Expect = 1e-017
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Frame = +2
Query: 221 SVLLRVTHSNLKTFSAEI----RFSLQSTVEAVKDKLWRKCGTSVNSMSLHLYDDANTKV 388
+V L +THS L S FSL ++ K+KL+R GT M L L D+ KV
Sbjct: 31 NVRLEITHSVLTGESLGTNNFKNFSLDLKIKDFKEKLYRFVGTEPKYMELILRDE--NKV 88
Query: 389 ADLA----DNSRPLGFYSPLDGFRLHIIDLDPSSVTSGGWLEDTSLVEKYTISQEAYEKR 556
D+ D+ + LG Y P DG +HIID DP++ S L+D S K IS+E Y KR
Sbjct: 89 NDICKIDDDDDKTLGSYEPKDGMNVHIIDKDPNNFVSE--LQDISKAPKPVISEEDYNKR 146
Query: 557 DGTFKKFKD--KLASQN----TSAVDNKIPDNFMEDLCANIKVGDRCQVEPGDKRGVVKF 718
+GT+KK+K+ +L +N T+ N D IKVGDRC+V D +
Sbjct: 147 EGTYKKWKEENQLKKENDTTATTVTATTTTTNNATDTEIEIKVGDRCKVISDDPTNYDER 206
Query: 719 VGRAE 733
+G+ +
Sbjct: 207 LGKVQ 211
Score = 67 bits (163), Expect = 9e-011
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Frame = +2
Query: 518 EKYTISQEAYE--KRDGTFKKFKDKLASQNTSAVDNKIPDNFMEDLCANIKVGDRCQVEP 691
E Y + Y+ K + KK D A+ T+ N D IKVGDRC+V
Sbjct: 141 EDYNKREGTYKKWKEENQLKKENDTTATTVTATTTT---TNNATDTEIEIKVGDRCKVIS 197
Query: 692 GD------KRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
D + G V++VG E + G W+GV+ D PLGK+DG VKG +YF C P
Sbjct: 198 DDPTNYDERLGKVQYVGTVE-FSSGVWIGVELDLPLGKNDGSVKGKQYFQCSP 249
>sp|Q96DZ5|CLIP3_HUMAN CAP-Gly domain-containing linker protein 3 OS=Homo
sapiens GN=CLIP3 PE=1 SV=3
Length = 547
Score = 70 bits (171), Expect = 1e-011
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +2
Query: 653 ANIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
A +VGD+ V G K+G+V+F G+ + APG+W G++ D+P GKHDG V G RYF CPP
Sbjct: 414 AKAEVGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPP 471
Score = 64 bits (153), Expect = 1e-009
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 617 NKIPDNFMEDLCANIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDG 796
+ +P N M +++GDR ++ G K G ++F G E A G WVGV+ DEP GK+DG
Sbjct: 281 DNVPGNLMLS-ALGLRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDG 337
Query: 797 MVKGTRYFNCPP 832
V G RYF CPP
Sbjct: 338 SVGGVRYFICPP 349
>sp|Q5R686|CLIP3_PONAB CAP-Gly domain-containing linker protein 3 OS=Pongo
abelii GN=CLIP3 PE=2 SV=1
Length = 547
Score = 70 bits (171), Expect = 1e-011
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +2
Query: 653 ANIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
A +VGD+ V G K+G+V+F G+ + APG+W G++ D+P GKHDG V G RYF CPP
Sbjct: 414 AKAEVGDQVLV-AGQKQGIVRFYGKTD-FAPGYWYGIELDQPTGKHDGSVFGVRYFTCPP 471
Score = 64 bits (153), Expect = 1e-009
Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 617 NKIPDNFMEDLCANIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDG 796
+ +P N M +++GDR ++ G K G ++F G E A G WVGV+ DEP GK+DG
Sbjct: 281 DNVPGNLMLS-ALGLRLGDRVLLD-GQKTGTLRFCGTTE-FASGQWVGVELDEPEGKNDG 337
Query: 797 MVKGTRYFNCPP 832
V G RYF CPP
Sbjct: 338 SVGGVRYFICPP 349
>sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2 OS=Homo
sapiens GN=CLIP2 PE=1 SV=1
Length = 1046
Score = 68 bits (165), Expect = 5e-011
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +2
Query: 656 NIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
++++GDR V G K GVV++VG + A G W GV+ DEPLGK+DG V GTRYF CPP
Sbjct: 218 DLRLGDRVLV-GGTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 274
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus
musculus GN=Clip1 PE=1 SV=1
Length = 1391
Score = 67 bits (162), Expect = 1e-010
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
+KVGDR V G K GVV+F+G + A G W GV+ DEPLGK+DG V GTRYF C P
Sbjct: 211 LKVGDRVLV-GGTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 266
>sp|Q9Z0H8|CLIP2_MOUSE CAP-Gly domain-containing linker protein 2 OS=Mus
musculus GN=Clip2 PE=1 SV=2
Length = 1047
Score = 67 bits (162), Expect = 1e-010
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +2
Query: 656 NIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
++ +GDR V G K GVV++VG + A G W GV+ DEPLGK+DG V GTRYF CPP
Sbjct: 219 DLHLGDRVLV-GGTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
>sp|O55156|CLIP2_RAT CAP-Gly domain-containing linker protein 2 OS=Rattus
norvegicus GN=Clip2 PE=1 SV=1
Length = 1046
Score = 67 bits (162), Expect = 1e-010
Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Frame = +2
Query: 656 NIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
++ +GDR V G K GVV++VG + A G W GV+ DEPLGK+DG V GTRYF CPP
Sbjct: 219 DLHLGDRVLV-GGTKTGVVRYVGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP 275
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus
gallus GN=CLIP1 PE=2 SV=1
Length = 1433
Score = 67 bits (161), Expect = 2e-010
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
+K+GDR V G K GVV+F+G + A G W GV+ DEPLGK+DG V GTRYF C P
Sbjct: 215 LKIGDRVLV-GGTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 270
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo
sapiens GN=CLIP1 PE=1 SV=1
Length = 1427
Score = 67 bits (161), Expect = 2e-010
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNCPP 832
+K+GDR V G K GVV+F+G + A G W GV+ DEPLGK+DG V GTRYF C P
Sbjct: 212 LKIGDRVLV-GGTKAGVVRFLGETD-FAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP 267
>sp|Q5U243|CLIP3_XENLA CAP-Gly domain-containing linker protein 3 OS=Xenopus
laevis GN=clip3 PE=2 SV=1
Length = 534
Score = 63 bits (152), Expect = 2e-009
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
I++GD+ V G K+G+V+F G+ + APG+W G++ ++P GKHDG V G RYF C
Sbjct: 403 IEIGDQVLV-AGQKQGIVRFYGKTD-FAPGYWFGIELEKPTGKHDGSVFGVRYFTC 456
Score = 62 bits (149), Expect = 4e-009
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +2
Query: 617 NKIPDNFMEDLCANIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDG 796
+ IP N M +K+GDR ++ +K G ++F G E A G WVGV+ DEP GK+DG
Sbjct: 271 DNIPGNLML-ASLGLKLGDRILLD-AEKAGTLRFCGTTE-FASGQWVGVELDEPDGKNDG 327
Query: 797 MVKGTRYFNCPP 832
V G RYF CPP
Sbjct: 328 SVGGIRYFICPP 339
>sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora crassa GN=ro-3
PE=3 SV=3
Length = 1367
Score = 59 bits (140), Expect = 4e-008
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKR-GVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
+ VG + ++ G R V++VG + APG WVG++ DEP GK+DG V+G RYFNC
Sbjct: 6 VAVGQKIELADGSGRTAFVRYVGET-AFAPGTWVGIELDEPSGKNDGSVQGERYFNC 61
>sp|P13496|DCTN1_DROME Dynactin subunit 1 OS=Drosophila melanogaster GN=Gl PE=1
SV=2
Length = 1265
Score = 56 bits (134), Expect = 2e-007
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 656 NIKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
N+KVG R ++ D G V +VG S A G WVGV DEP GK+ G +KG +YF C
Sbjct: 5 NLKVGARVELTGKDLLGTVAYVGMT-SFAVGKWVGVVLDEPKGKNSGSIKGQQYFQC 60
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 53 bits (125), Expect = 2e-006
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
+KVG R +V RG V +VG A A G WVGV DE GK+DG V+G +YF C
Sbjct: 28 LKVGSRVEVIGKGHRGTVAYVG-ATLXATGKWVGVILDEAKGKNDGTVQGRKYFTC 82
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 53 bits (125), Expect = 2e-006
Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
+KVG R +V RG V +VG A A G WVGV D+ GK+DG V+G RYF C
Sbjct: 10 LKVGSRVEVIGKGYRGTVAYVG-ATLFATGKWVGVILDDSKGKNDGTVQGRRYFTC 64
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 52 bits (123), Expect = 4e-006
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
++VG R +V RG V +VG A A G WVGV DE GK+DG V+G +YF C
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 81
>sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn1 PE=1 SV=2
Length = 1281
Score = 52 bits (123), Expect = 4e-006
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
++VG R +V RG V +VG A A G WVGV DE GK+DG V+G +YF C
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 81
>sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=Dctn1 PE=2 SV=2
Length = 1280
Score = 52 bits (123), Expect = 4e-006
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 659 IKVGDRCQVEPGDKRGVVKFVGRAESLAPGFWVGVQYDEPLGKHDGMVKGTRYFNC 826
++VG R +V RG V +VG A A G WVGV DE GK+DG V+G +YF C
Sbjct: 27 LRVGSRVEVIGKGHRGTVAYVG-ATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC 81
>sp|Q10235|ALP11_SCHPO Cell polarity protein alp11 OS=Schizosaccharomyces pombe
GN=alp11 PE=1 SV=1
Length = 234
Score = 51 bits (120), Expect = 9e-006
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 692 GDKRGVVKFVGRAESL-APGFWVGVQYDEPLGKHDGMVKGTRYFN 823
G++ G ++++G + WVGV++DEP+GK+DG V G RYFN
Sbjct: 162 GERYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFN 206
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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