BLASTX 7.6.2
Query= RU04180 /QuerySize=745
(744 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabid... 166 2e-040
sp|Q9FN11|LBD37_ARATH LOB domain-containing protein 37 OS=Arabid... 165 4e-040
sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabid... 165 4e-040
sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabid... 131 6e-030
sp|Q9ZW96|LBD40_ARATH LOB domain-containing protein 40 OS=Arabid... 131 7e-030
sp|Q9CA30|LBD42_ARATH LOB domain-containing protein 42 OS=Arabid... 126 2e-028
>sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana
GN=LBD38 PE=2 SV=1
Length = 247
Score = 166 bits (419), Expect = 2e-040
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPC+QWIE+PEAQGHATVFVAKFFGRAGLMSFISAVPE Q
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLL+EACGRTVNPVNGAVG
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAVG 84
Score = 88 bits (217), Expect = 4e-017
Identities = 59/139 (42%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVSGSGSGLTPDEASEADGTACTDMWRLRDP 231
GLLWTGNW VCQAAVETVLRGG+L+PIPEL++G G P S+ CT+M LR
Sbjct: 84 GLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASEICTEMLNLRKA 143
Query: 230 THXXXXXXXXXXXXXKAASCSPTT----KRKRPDDESLKVLQHADLDLRLTPTLLAFRPK 63
+ S S +T KRKR E ++LDL L P + +
Sbjct: 144 DDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQ---QPSSELDLSLIP-IYPIKTL 199
Query: 62 PKPETRRPGSPSMNSEESV 6
P E +PSM SEESV
Sbjct: 200 PFKE----DTPSMYSEESV 214
>sp|Q9FN11|LBD37_ARATH LOB domain-containing protein 37 OS=Arabidopsis thaliana
GN=LBD37 PE=2 SV=1
Length = 250
Score = 165 bits (416), Expect = 4e-040
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPC+QWIET +AQGHATVFVAKFFGRAGLMSFISAVP+ QR
Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLL+EACGRTVNPVNGA+G
Sbjct: 61 PALFQSLLYEACGRTVNPVNGAIG 84
Score = 74 bits (180), Expect = 8e-013
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVS-GSGSGLTPDEASEADGTACTDMWRLR 237
G+LWTGNW +CQAAVETVLRGG+LRPIPEL++ G G P SE CT+M L+
Sbjct: 84 GMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASEICTEMLNLQ 142
>sp|Q9SZE8|LBD39_ARATH LOB domain-containing protein 39 OS=Arabidopsis thaliana
GN=LBD39 PE=2 SV=1
Length = 240
Score = 165 bits (416), Expect = 4e-040
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+CILRPCLQWIE+ E+QGHATVFVAKFFGRAGLMSFIS+VPE QR
Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P LFQSLLFEACGRTVNPVNGAVG
Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVG 84
Score = 64 bits (154), Expect = 9e-010
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2
Query: 410 GLLWTGNWQVCQAAVETVLRGGTLRPIPELVSGSGSGLTPDEASE 276
G+LWT NW VCQAAVETVLRGGTLRPI +L+ ++ DE+SE
Sbjct: 84 GMLWTRNWHVCQAAVETVLRGGTLRPISDLLESPSLMISCDESSE 128
>sp|Q9M886|LBD41_ARATH LOB domain-containing protein 41 OS=Arabidopsis thaliana
GN=LBD41 PE=2 SV=1
Length = 263
Score = 131 bits (328), Expect = 6e-030
Identities = 59/84 (70%), Positives = 71/84 (84%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE C +RPCL WI++PEAQ +ATVF+AKF+GRAGLM+ I+A P R
Sbjct: 3 MSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P +F+SLL EACGR VNP+ G+VG
Sbjct: 63 PGIFRSLLHEACGRIVNPIYGSVG 86
>sp|Q9ZW96|LBD40_ARATH LOB domain-containing protein 40 OS=Arabidopsis thaliana
GN=LBD40 PE=2 SV=1
Length = 233
Score = 131 bits (327), Expect = 7e-030
Identities = 56/84 (66%), Positives = 73/84 (86%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
MSCNGCRVLRKGCSE+C +RPCLQWI++ E+Q +ATVF+AKF+GRAGLM+ ++ P+ R
Sbjct: 3 MSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVG 407
P +F+SLL+EACGR VNP+ G+VG
Sbjct: 63 PAIFRSLLYEACGRIVNPIYGSVG 86
>sp|Q9CA30|LBD42_ARATH LOB domain-containing protein 42 OS=Arabidopsis thaliana
GN=LBD42 PE=2 SV=1
Length = 233
Score = 126 bits (315), Expect = 2e-028
Identities = 53/89 (59%), Positives = 74/89 (83%)
Frame = -3
Query: 658 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISAVPEPQR 479
+SCNGCRVLRKGC++ C +RPCLQWI++ ++Q +AT+F+AKF+GRAGL++ I + P+ R
Sbjct: 3 ISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLR 62
Query: 478 PVLFQSLLFEACGRTVNPVNGAVGCSGPG 392
P +F+SLL+EACGR VNPV+G+VG G
Sbjct: 63 PAIFRSLLYEACGRIVNPVDGSVGLMWSG 91
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,073,084,167
Number of Sequences: 462764
Number of Extensions: 6073084167
Number of Successful Extensions: 56121479
Number of sequences better than 0.0: 0
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