BLASTX 7.6.2
Query= RU04798 /QuerySize=1058
(1057 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thal... 257 2e-067
sp|Q8RYC8|ARFS_ARATH Auxin response factor 19 OS=Arabidopsis tha... 236 2e-061
sp|A2YAA5|ARFP_ORYSI Auxin response factor 16 OS=Oryza sativa su... 204 9e-052
sp|A3B9A0|ARFP_ORYSJ Auxin response factor 16 OS=Oryza sativa su... 204 9e-052
sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa su... 65 7e-010
>sp|P93022|ARFG_ARATH Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7
PE=1 SV=2
Length = 1164
Score = 257 bits (654), Expect = 2e-067
Identities = 149/268 (55%), Positives = 185/268 (69%), Gaps = 18/268 (6%)
Frame = -2
Query: 786 SSNNFSASPMMQAQHVSSIQQQNQHKPV-TAIRSHSNLTE-GDGPSCSTSPSTNNCQVSS 613
S N S + Q + S Q+ Q+ PV ++++S +T+ GD PS STSPSTNNCQ+SS
Sbjct: 797 SCTNNGLSTLQPPQMLVSRPQEKQNPPVGGGVKAYSGITDGGDAPSSSTSPSTNNCQISS 856
Query: 612 SNLLNRNQQGTAMLIGDPVAEPSSNLVHDFQSKSDIRIKHELPISKGLDQIKYKGTITD- 436
S LNR+Q G A+LI D + S NLV D SKSD+R+K EL + Q K K ++TD
Sbjct: 857 SGFLNRSQSGPAILIPDAAIDMSGNLVQDLYSKSDMRLKQEL-----VGQQKSKASLTDH 911
Query: 435 QLEASSSGTSYCLDA--STIQQNYALPSFCLDGDVQSHPRNNLPFSANVD-GLAPDTLMS 265
QLEAS+SGTSY LD + QQN+ P+F LDGD RN+L ANVD G PDTL+S
Sbjct: 912 QLEASASGTSYGLDGGENNRQQNFLAPTFGLDGD----SRNSLLGGANVDNGFVPDTLLS 967
Query: 264 RGYDSQKDL*NLLSNYGGTPRDIETELSTAAISSQSFGAPNMPFKPGCSSDVALNDAGVL 85
RGYDSQKDL N+LSNYGG DI TE+ST+A+ +QSFG PN+ P S+D+A+NDAGVL
Sbjct: 968 RGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQSFGVPNV---PAISNDLAVNDAGVL 1024
Query: 84 NNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
GLW +Q QR+RTYTKVQKRGSVGR I
Sbjct: 1025 GGGLWPAQTQRMRTYTKVQKRGSVGRSI 1052
>sp|Q8RYC8|ARFS_ARATH Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19
PE=1 SV=2
Length = 1086
Score = 236 bits (602), Expect = 2e-061
Identities = 140/278 (50%), Positives = 180/278 (64%), Gaps = 22/278 (7%)
Frame = -2
Query: 783 SNNFSASPMMQAQHVS-SIQQQNQ---HKPVTAIRSHSNLTEGDGPSCSTSPSTNNC--- 625
+N+F AS MQ + S QQQ Q V A RSHS T+G+ PSCSTSPS NN
Sbjct: 701 NNSFPASTFMQPPQIQVSPQQQGQMSNKNLVAAGRSHSGHTDGEAPSCSTSPSANNTGHD 760
Query: 624 QVSSSNLLNRNQ---QGTAMLIGDPVAEPSSNLVHDFQSKSDIRIKHELPISKGL-DQIK 457
VS +N L+RNQ Q ++ D V E +SN V + +K++ RI + K + +
Sbjct: 761 NVSPTNFLSRNQQQGQAASVSASDSVFERASNPVQELYTKTESRISQGMMNMKSAGEHFR 820
Query: 456 YKGTITDQLEASSSGTSYCLDA---STIQQNYALPSFCLDGDVQS-HPRNNLPFSANVDG 289
+K +TDQ++ S++GT+YC D QQ + LPSF DGD QS HPRNNL F N++
Sbjct: 821 FKSAVTDQIDVSTAGTTYCPDVVGPVQQQQTFPLPSFGFDGDCQSHHPRNNLAFPGNLEA 880
Query: 288 LAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAAISSQSFGAPNMPFKPGCSSDV 109
+ D L SQKD NL+ NYG TPRDIETELS+AAISSQSFG P++PFKPGCS++V
Sbjct: 881 VTSDPLY-----SQKDFQNLVPNYGNTPRDIETELSSAAISSQSFGIPSIPFKPGCSNEV 935
Query: 108 -ALNDAGVLN-NGLWGSQAQRLRTYTKVQKRGSVGRCI 1
+ND+G++N GLW +Q QR+RTYTKVQKRGSVGR I
Sbjct: 936 GGINDSGIMNGGGLWPNQTQRMRTYTKVQKRGSVGRSI 973
>sp|A2YAA5|ARFP_ORYSI Auxin response factor 16 OS=Oryza sativa subsp. indica
GN=ARF16 PE=2 SV=1
Length = 1055
Score = 204 bits (518), Expect = 9e-052
Identities = 121/237 (51%), Positives = 157/237 (66%), Gaps = 8/237 (3%)
Frame = -2
Query: 708 PVTAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPS-SNLV 532
P +RSHS L E PS ST+PST+ ++S N L+R QG+ L D VA P NL+
Sbjct: 726 PQQLVRSHSALAESGDPSSSTAPSTS--RISPINSLSRANQGSRNLT-DMVATPQIDNLL 782
Query: 531 HDFQSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFC 352
+ QSK D RIK+++ SK I + ++DQL+ASS+ TS+CLD S ++ ++ P C
Sbjct: 783 QEIQSKPDNRIKNDIQ-SKETVPIHNRHPVSDQLDASSA-TSFCLDESP-REGFSFPPVC 839
Query: 351 LDGDVQSHPRNNLPFSANVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAA 172
LD +VQ PR+N + NVD L PD L+SRG S K + L S RD+E ELS+AA
Sbjct: 840 LDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQ-RDHRDVENELSSAA 898
Query: 171 ISSQSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
SSQSFG P+M FKPGCSSDVA+ DAG+ + GLW +Q QR+RT+TKVQKRGSVGR I
Sbjct: 899 FSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTKVQKRGSVGRSI 955
>sp|A3B9A0|ARFP_ORYSJ Auxin response factor 16 OS=Oryza sativa subsp. japonica
GN=ARF16 PE=2 SV=1
Length = 1055
Score = 204 bits (518), Expect = 9e-052
Identities = 121/237 (51%), Positives = 157/237 (66%), Gaps = 8/237 (3%)
Frame = -2
Query: 708 PVTAIRSHSNLTEGDGPSCSTSPSTNNCQVSSSNLLNRNQQGTAMLIGDPVAEPS-SNLV 532
P +RSHS L E PS ST+PST+ ++S N L+R QG+ L D VA P NL+
Sbjct: 726 PQQLVRSHSALAESGDPSSSTAPSTS--RISPINSLSRANQGSRNLT-DMVATPQIDNLL 782
Query: 531 HDFQSKSDIRIKHELPISKGLDQIKYKGTITDQLEASSSGTSYCLDASTIQQNYALPSFC 352
+ QSK D RIK+++ SK I + ++DQL+ASS+ TS+CLD S ++ ++ P C
Sbjct: 783 QEIQSKPDNRIKNDIQ-SKETVPIHNRHPVSDQLDASSA-TSFCLDESP-REGFSFPPVC 839
Query: 351 LDGDVQSHPRNNLPFSANVDGLAPDTLMSRGYDSQKDL*NLLSNYGGTPRDIETELSTAA 172
LD +VQ PR+N + NVD L PD L+SRG S K + L S RD+E ELS+AA
Sbjct: 840 LDNNVQVDPRDNFLIAENVDALMPDALLSRGMASGKGMCTLTSGQ-RDHRDVENELSSAA 898
Query: 171 ISSQSFGAPNMPFKPGCSSDVALNDAGVLNNGLWGSQAQRLRTYTKVQKRGSVGRCI 1
SSQSFG P+M FKPGCSSDVA+ DAG+ + GLW +Q QR+RT+TKVQKRGSVGR I
Sbjct: 899 FSSQSFGVPDMSFKPGCSSDVAVTDAGMPSQGLWNNQTQRMRTFTKVQKRGSVGRSI 955
>sp|Q6YZW0|ARFU_ORYSJ Auxin response factor 21 OS=Oryza sativa subsp. japonica
GN=ARF21 PE=2 SV=2
Length = 1116
Score = 65 bits (157), Expect = 7e-010
Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Frame = -2
Query: 390 STIQQNYALPSFCLDGDVQ-SHPRNNLPFSANVDG-----LAPDTLMSR-GYDSQKDL-- 238
S+ Q++ L D + + + PRNNL F N+DG L D L + G D D
Sbjct: 877 SSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQLP 936
Query: 237 *NLLSNYGGTPRDIETELSTAAISSQSFGAPNMPFKPGCSSDVALNDAGVLN---NGLWG 67
N +SN+ + +D + ELS++ I S SFG +M F S D A+ND LN G
Sbjct: 937 GNGISNFISS-KDSQQELSSSMI-SHSFGVADMAFN---SIDSAINDTPFLNRNSRSAAG 991
Query: 66 SQAQRLRTYTKVQKRGSVGRCI 1
QR+RTYTKV KRG+VGR I
Sbjct: 992 PAHQRMRTYTKVHKRGAVGRSI 1013
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,390,147,223
Number of Sequences: 462764
Number of Extensions: 8390147223
Number of Successful Extensions: 74969301
Number of sequences better than 0.0: 0
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