BLASTX 7.6.2
Query= RU04898 /QuerySize=325
(324 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus... 149 4e-036
sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabi... 136 5e-032
sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabi... 129 3e-030
sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryz... 116 4e-026
sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=S... 116 5e-026
sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabi... 107 1e-023
sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabi... 86 5e-017
sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza... 82 5e-016
sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD... 80 2e-015
sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryz... 74 1e-013
sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza... 71 1e-012
sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Sol... 51 1e-006
sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1... 50 3e-006
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2
SV=1
Length = 427
Score = 149 bits (375), Expect = 4e-036
Identities = 72/79 (91%), Positives = 75/79 (94%)
Frame = +1
Query: 88 INWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSH 267
+NWQNARHKAEILAHP YEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS L +
Sbjct: 160 MNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGN 219
Query: 268 GMVADDKELDQFMRHYVLL 324
GMV DDKELDQFMR+YVLL
Sbjct: 220 GMVGDDKELDQFMRNYVLL 238
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana
GN=KNAT3 PE=2 SV=1
Length = 431
Score = 136 bits (340), Expect = 5e-032
Identities = 67/82 (81%), Positives = 73/82 (89%), Gaps = 3/82 (3%)
Frame = +1
Query: 88 INWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGL-- 261
++WQNARHKAEIL+HP YE LLSAHVACLRIATPVDQLPRIDAQLAQSQ+VVAKYS L
Sbjct: 152 VSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGA 211
Query: 262 -SHGMVADDKELDQFMRHYVLL 324
+ G+V DDKELDQFM HYVLL
Sbjct: 212 AAQGLVGDDKELDQFMTHYVLL 233
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana
GN=KNAT4 PE=2 SV=3
Length = 393
Score = 129 bits (324), Expect = 3e-030
Identities = 67/80 (83%), Positives = 71/80 (88%), Gaps = 3/80 (3%)
Frame = +1
Query: 94 WQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGL--SH 267
WQNARHKAEIL+HP YE LLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS L +
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 268 GMVA-DDKELDQFMRHYVLL 324
G++A DDKELD FM HYVLL
Sbjct: 178 GLLAGDDKELDHFMTHYVLL 197
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp.
japonica GN=OSH45 PE=2 SV=2
Length = 374
Score = 116 bits (289), Expect = 4e-026
Identities = 61/75 (81%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Frame = +1
Query: 103 ARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHGMVAD 282
AR KAEILAHP YE LLSAHVACLRIATPVDQLPRIDAQLAQSQ VVAKYS L+ D
Sbjct: 106 ARCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGD 165
Query: 283 D-KELDQFMRHYVLL 324
D +ELDQFM HYVLL
Sbjct: 166 DGRELDQFMTHYVLL 180
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum
lycopersicum GN=LET12 PE=2 SV=1
Length = 426
Score = 116 bits (288), Expect = 5e-026
Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = +1
Query: 91 NWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHG 270
+W+ + KA+IL HP Y+ LLSAHV+CLRIATPVDQLPRIDAQLAQSQNVVAKYS L G
Sbjct: 157 SWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQG 216
Query: 271 M-VADDKELDQFMRHYVLL 324
DDK+LDQFM HYVLL
Sbjct: 217 QPPLDDKDLDQFMTHYVLL 235
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana
GN=KNAT5 PE=1 SV=2
Length = 383
Score = 107 bits (267), Expect = 1e-023
Identities = 52/78 (66%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 NWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHG 270
+W++A +KA IL HP YE LL+AHVACLR+ATPVDQ+PRIDAQL+Q V AKYS L G
Sbjct: 112 DWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL--G 169
Query: 271 MVADDKELDQFMRHYVLL 324
+V D+KELD FM HYV+L
Sbjct: 170 VVVDNKELDHFMSHYVVL 187
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana
GN=KNAT7 PE=2 SV=1
Length = 291
Score = 86 bits (210), Expect = 5e-017
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +1
Query: 97 QNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHGMV 276
QN + K EI HP YE LL+AHVACLR+ATP+DQLP I+AQL+QS +++ Y+ + G
Sbjct: 25 QNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYH 84
Query: 277 ADDKELDQFMRHYVLL 324
D ELD F+ YV++
Sbjct: 85 HDRHELDNFLAQYVMV 100
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp.
japonica GN=HOS58 PE=2 SV=2
Length = 313
Score = 82 bits (202), Expect = 5e-016
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +1
Query: 106 RHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQL-AQSQNVVAKYSGLSHGMVAD 282
R KA + AHP YE LL AHVACLR+ATPVDQLPRIDAQ+ A+ + A + + G +
Sbjct: 41 REKAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSG 100
Query: 283 DKELDQFMRHYVLL 324
+ELD FM HYVLL
Sbjct: 101 GEELDLFMTHYVLL 114
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 80 bits (197), Expect = 2e-015
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 97 QNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHGMV 276
QN + K EI HP Y+ LL+AHVACLR+ATP+DQLP I+AQL+ S +++ Y+ + G
Sbjct: 27 QNRQMKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFS 86
Query: 277 ADDK-ELDQFMRHYVLL 324
D+ ELD F+ YV++
Sbjct: 87 HHDRQELDNFLAQYVMV 103
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp.
japonica GN=HOS59 PE=2 SV=2
Length = 323
Score = 74 bits (181), Expect = 1e-013
Identities = 40/74 (54%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = +1
Query: 106 RHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQ-----SQNVVAKYSGLSHG 270
R KA I AHP YE LL AHVACLR+ATPVDQLPRIDAQ+A + A + + G
Sbjct: 46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGG 105
Query: 271 MVADDKELDQFMRH 312
+ +ELD FM H
Sbjct: 106 APSGGEELDLFMTH 119
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp.
japonica GN=HOS66 PE=2 SV=1
Length = 314
Score = 71 bits (172), Expect = 1e-012
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +1
Query: 112 KAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHGMVA--DD 285
K EI HP E L++AHV CLR+ATP+D LP IDAQLAQS ++ Y+ ++ D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 286 KELDQFMRHYVL 321
+ELD F+ Y++
Sbjct: 114 QELDSFLAQYMM 125
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum
lycopersicum GN=LET6 PE=2 SV=1
Length = 355
Score = 51 bits (121), Expect = 1e-006
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +1
Query: 91 NWQNARHKAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHG 270
N ++ K++I+AHP Y LL+A++ C +I P + + R++ A S + S G
Sbjct: 90 NSSSSSIKSKIMAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGG 149
Query: 271 MVADDKELDQFMRHY 315
++ +D LDQFM Y
Sbjct: 150 IIGEDPALDQFMEAY 164
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 50 bits (117), Expect = 3e-006
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 112 KAEILAHPFYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGLSHGMVADDKE 291
KA+I+AHP Y LL+A+V C ++ P + + R++ A + + + + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGEDPA 184
Query: 292 LDQFMRHY 315
LDQFM Y
Sbjct: 185 LDQFMEAY 192
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,390,147,223
Number of Sequences: 462764
Number of Extensions: 8390147223
Number of Successful Extensions: 74969301
Number of sequences better than 0.0: 0
|