BLASTX 7.6.2
Query= RU05081 /QuerySize=1101
(1100 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UFF9|CNOT8_HUMAN CCR4-NOT transcription complex subunit 8 O... 221 6e-057
sp|Q9D8X5|CNOT8_MOUSE CCR4-NOT transcription complex subunit 8 O... 221 6e-057
sp|Q3ZC01|CNOT7_BOVIN CCR4-NOT transcription complex subunit 7 O... 218 5e-056
sp|Q5ZJV9|CNOT7_CHICK CCR4-NOT transcription complex subunit 7 O... 218 5e-056
sp|Q9UIV1|CNOT7_HUMAN CCR4-NOT transcription complex subunit 7 O... 218 5e-056
sp|Q60809|CNOT7_MOUSE CCR4-NOT transcription complex subunit 7 O... 218 5e-056
sp|Q3KQ85|CNOT7_XENLA CCR4-NOT transcription complex subunit 7 O... 215 5e-055
sp|A4II96|CNOT7_XENTR CCR4-NOT transcription complex subunit 7 O... 214 1e-054
sp|Q08BM8|CNOT7_DANRE CCR4-NOT transcription complex subunit 7 O... 213 2e-054
sp|O74856|CAF1_SCHPO Poly(A) ribonuclease pop2 OS=Schizosaccharo... 196 3e-049
sp|Q17345|CNOT7_CAEEL CCR4-NOT transcription complex subunit 7 O... 171 7e-042
sp|P39008|POP2_YEAST Poly(A) ribonuclease POP2 OS=Saccharomyces ... 145 7e-034
>sp|Q9UFF9|CNOT8_HUMAN CCR4-NOT transcription complex subunit 8 OS=Homo sapiens
GN=CNOT8 PE=1 SV=1
Length = 292
Score = 221 bits (563), Expect = 6e-057
Identities = 126/261 (48%), Positives = 172/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NL++E KIR ++ + I+MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGE---FR--SSIDYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT ++ G P W+FNF+ F++ D ++ DSI+LL G+ F+
Sbjct: 70 DLLKIIQLGLTFTNEKGEYP----SGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQ 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GID+ FA+L+M+SG+V ++VKW++FHS YDFGY+VKLLT LPEE F
Sbjct: 125 KHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+ +FF S YDVK+L K C +L GGL V L++ R IG+ HQAGSDSLLT A+ R+K
Sbjct: 185 LNLFFPS-IYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMK 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
ELFF +D I+ +Y G LYGL
Sbjct: 243 ELFF-EDSIDDAKYCGRLYGL 262
>sp|Q9D8X5|CNOT8_MOUSE CCR4-NOT transcription complex subunit 8 OS=Mus musculus
GN=Cnot8 PE=2 SV=1
Length = 292
Score = 221 bits (563), Expect = 6e-057
Identities = 126/261 (48%), Positives = 172/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NL++E KIR ++ + I+MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGE---FR--SSIDYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT ++ G P W+FNF+ F++ D ++ DSI+LL G+ F+
Sbjct: 70 DLLKIIQLGLTFTNEKGEYP----SGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQ 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GID+ FA+L+M+SG+V ++VKW++FHS YDFGY+VKLLT LPEE F
Sbjct: 125 KHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+ +FF S YDVK+L K C +L GGL V L++ R IG+ HQAGSDSLLT A+ R+K
Sbjct: 185 LNLFFPS-IYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMK 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
ELFF +D I+ +Y G LYGL
Sbjct: 243 ELFF-EDSIDDAKYCGRLYGL 262
>sp|Q3ZC01|CNOT7_BOVIN CCR4-NOT transcription complex subunit 7 OS=Bos taurus
GN=CNOT7 PE=2 SV=1
Length = 285
Score = 218 bits (555), Expect = 5e-056
Identities = 127/261 (48%), Positives = 171/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLD+E KIR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L+M+SG+V E VKW++FHS YDFGYL+K+LT LPEE F
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|Q5ZJV9|CNOT7_CHICK CCR4-NOT transcription complex subunit 7 OS=Gallus gallus
GN=CNOT7 PE=2 SV=1
Length = 285
Score = 218 bits (555), Expect = 5e-056
Identities = 127/261 (48%), Positives = 171/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLD+E KIR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L+M+SG+V E VKW++FHS YDFGYL+K+LT LPEE F
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|Q9UIV1|CNOT7_HUMAN CCR4-NOT transcription complex subunit 7 OS=Homo sapiens
GN=CNOT7 PE=1 SV=3
Length = 285
Score = 218 bits (555), Expect = 5e-056
Identities = 127/261 (48%), Positives = 171/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLD+E KIR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L+M+SG+V E VKW++FHS YDFGYL+K+LT LPEE F
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|Q60809|CNOT7_MOUSE CCR4-NOT transcription complex subunit 7 OS=Mus musculus
GN=Cnot7 PE=1 SV=1
Length = 285
Score = 218 bits (555), Expect = 5e-056
Identities = 127/261 (48%), Positives = 171/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLD+E KIR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L+M+SG+V E VKW++FHS YDFGYL+K+LT LPEE F
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|Q3KQ85|CNOT7_XENLA CCR4-NOT transcription complex subunit 7 OS=Xenopus
laevis GN=cnot7 PE=2 SV=1
Length = 285
Score = 215 bits (546), Expect = 5e-055
Identities = 125/261 (47%), Positives = 169/261 (64%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLDD+ +IR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L M+SG+V E VKW++FHS YDFGYL+K+LT LPE F
Sbjct: 125 KHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|A4II96|CNOT7_XENTR CCR4-NOT transcription complex subunit 7 OS=Xenopus
tropicalis GN=cnot7 PE=2 SV=1
Length = 285
Score = 214 bits (543), Expect = 1e-054
Identities = 125/261 (47%), Positives = 169/261 (64%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NLDD+ +IR VI ++ ++MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFVNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L M+SG+V E VKW++FHS YDFGYL+K+LT LPE F
Sbjct: 125 KHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVELDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELKR-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|Q08BM8|CNOT7_DANRE CCR4-NOT transcription complex subunit 7 OS=Danio rerio
GN=cnot7 PE=2 SV=1
Length = 286
Score = 213 bits (542), Expect = 2e-054
Identities = 124/261 (47%), Positives = 170/261 (65%), Gaps = 15/261 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VWA NL++E +IR V +F I+MDTEFPGVV RP E FR D Y +L+ NV
Sbjct: 15 VWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGE---FR--SNADYQYQLLRCNV 69
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GLT + G P S W+FNF+ F++ D +A DSIELL GI F+
Sbjct: 70 DLLKIIQLGLTFMNEQGEYPPGTS----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ + GI++ FA+L+M+SG+V E VKW++FHS YDFGYL+K+L+ LP+E F
Sbjct: 125 KHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEI 184
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+++FF YDVK+L K C +L GGL V + L + R IG HQAGSDSLLT A+ +++
Sbjct: 185 LRLFFPI-IYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMR 242
Query: 925 ELFFSKDGIE--QYAGVLYGL 981
E+FF +D I+ +Y G LYGL
Sbjct: 243 EMFF-EDHIDDAKYCGHLYGL 262
>sp|O74856|CAF1_SCHPO Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe
GN=caf1 PE=1 SV=1
Length = 332
Score = 196 bits (496), Expect = 3e-049
Identities = 112/259 (43%), Positives = 156/259 (60%), Gaps = 12/259 (4%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VW+ NL E + I S+I+ +P++SMDTEFPGVV RP F+ D D +Y L+ANV
Sbjct: 25 VWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGV---FKSSD--DYHYQTLRANV 79
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D L +IQ+GL LSD GN P W+FNF F++ D +A +SIELL + GIDF+
Sbjct: 80 DSLKIIQIGLALSDEEGNAP----VEACTWQFNF-TFNLQDDMYAPESIELLTKSGIDFK 134
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++++ GI+ FA+L++ SGLV E+V WITFHS YDF YL+K +TQ LP E F
Sbjct: 135 KHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKI 194
Query: 745 VKVFFGSGGYDVKHLTKFCAHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAYQRIK 924
+ ++F YD+K++ K + GL + L + R IG HQAGSD+LLT + I+
Sbjct: 195 LCIYFPK-NYDIKYIMKSVLNNSKGLQDIADDLQIHR-IGPQHQAGSDALLTARIFFEIR 252
Query: 925 ELFFSKDGIEQYAGVLYGL 981
+F + LYGL
Sbjct: 253 SRYFDGSIDSRMLNQLYGL 271
>sp|Q17345|CNOT7_CAEEL CCR4-NOT transcription complex subunit 7
OS=Caenorhabditis elegans GN=ccf-1 PE=2 SV=1
Length = 310
Score = 171 bits (433), Expect = 7e-042
Identities = 106/262 (40%), Positives = 153/262 (58%), Gaps = 17/262 (6%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
V+ N+++EF +IR ++++P ++MDTEFPGVV P FR + D NY + NV
Sbjct: 26 VYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLG---TFR--SKEDFNYQQVFCNV 80
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
+ L LIQVG + + G LP G +W+FNF +F D +H+S+E+LR+ GIDF
Sbjct: 81 NMLKLIQVGFAMVNDKGELPPTGD----VWQFNF-NFSFAEDMFSHESVEMLRQAGIDFT 135
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGFLSR 744
++ GI + F +L+ +SGL+ + + W+TF S YDFGYL+K +T LP+E F
Sbjct: 136 LLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKEESTFFMC 195
Query: 745 VKVFFGSGGYDVKHL--TKFC--AHLYGGLDRVCQALNVGRAIGKSHQAGSDSLLTLHAY 912
K F + +D+K L T C A L GGL V L+V R G HQAGSD+LLT +
Sbjct: 196 HKTLFPT-SFDIKILLRTPNCASAKLKGGLQEVADQLDVKRQ-GVRHQAGSDALLTAATF 253
Query: 913 QRIKELFFSKDGIEQYAGVLYG 978
+IK+ FF D Q A ++ G
Sbjct: 254 FKIKKQFFG-DNWNQIAPLICG 274
>sp|P39008|POP2_YEAST Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae
GN=POP2 PE=1 SV=2
Length = 433
Score = 145 bits (364), Expect = 7e-034
Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 9/177 (5%)
Frame = +1
Query: 205 VWADNLDDEFDKIRSVIDEFPMISMDTEFPGVVFRPNAEDPNFRHLDRPDANYLVLKANV 384
VW NL EF IR ++ ++ +S+ TEF G + RP FR + D +Y ++ANV
Sbjct: 163 VWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIG---TFR--SKVDYHYQTMRANV 217
Query: 385 DRLNLIQVGLTLSDRVGNLPDLGSENKYIWEFNFRDFDVGRDPHAHDSIELLRRQGIDFE 564
D LN IQ+GL+LSD GN PD G W+FNF +FD ++ + +S+ELLR+ GI+FE
Sbjct: 218 DFLNPIQLGLSLSDANGNKPDNGPST---WQFNF-EFDPKKEIMSTESLELLRKSGINFE 273
Query: 565 RNRDRGIDSYKFAQLMMSSGLVCNEDVKWITFHSAYDFGYLVKLLTQQALPEELPGF 735
++ + GID ++F+QL+M SGL+ ++ V WIT+H+AYD G+L+ +L ++P F
Sbjct: 274 KHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDF 330
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,390,147,223
Number of Sequences: 462764
Number of Extensions: 8390147223
Number of Successful Extensions: 74969301
Number of sequences better than 0.0: 0
|