BLASTX 7.6.2
Query= RU05863 /QuerySize=952
(951 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1 80 2e-014
sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1 77 1e-013
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 71 1e-011
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M... 67 2e-010
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE... 65 4e-010
sp|Q75B82|NHP6_ASHGO Non-histone chromosomal protein 6 OS=Ashbya... 51 8e-006
>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
Length = 152
Score = 80 bits (196), Expect = 2e-014
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGDNG 584
VGKA G KWK++SDAEKAPY AK+EKRKVEY KNM YNKKQAEG G
Sbjct: 75 VGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTG 122
Score = 73 bits (177), Expect = 3e-012
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKLXXXXXXXXXXX------XXXXXDPNKPKRPASAFFVFMEEFR 292
MKGGKS+ + KR+D KL DPNKPKRP SAFFVFMEEFR
Sbjct: 1 MKGGKSKTES-KRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFR 59
Query: 293 EKYKKEHPNNKSVAAVSES 349
+ + KEHP NK+V+AV ++
Sbjct: 60 KVFNKEHPENKAVSAVGKA 78
>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
Length = 149
Score = 77 bits (189), Expect = 1e-013
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXX-------XDPNKPKRPASAFFVFMEEF 289
MKGGKS+ + K+++TKL DPNKPKRP SAFFVFM +F
Sbjct: 1 MKGGKSKGES-KKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADF 59
Query: 290 REKYKKEHPNNKSVAAVSES 349
RE+YKK+HPNNKSVAAV ++
Sbjct: 60 REQYKKDHPNNKSVAAVGKA 79
Score = 54 bits (128), Expect = 1e-006
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKK 563
VGKA GE+WKSLS+ EKAPY +A K+K EY + YNKK
Sbjct: 76 VGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK 116
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 71 bits (172), Expect = 1e-011
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 575
VGKAGG+KWK L+ AEKAP+ +KAEKRK EY KN+ YNKKQA G
Sbjct: 67 VGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111
Score = 70 bits (169), Expect = 2e-011
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +2
Query: 140 GKSRAAAPKRSDTKLX-XXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEHP 316
GKS+A +SD KL DPNKPKRP SAFFVFME+FR+ YK++HP
Sbjct: 4 GKSKA----KSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHP 59
Query: 317 NNKSVAAVSES 349
NNKSVA V ++
Sbjct: 60 NNKSVAVVGKA 70
>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
Length = 157
Score = 67 bits (161), Expect = 2e-010
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKLXXXXXX----XXXXXXXXXXDPNKPKRPASAFFVFMEEFREK 298
MKG KS+ AA ++D KL DPNKPKR SAFFVFMEEFR++
Sbjct: 1 MKGAKSKGAA--KADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 58
Query: 299 YKKEHPNNKSVAAVSES 349
+K+++P NKSVAAV ++
Sbjct: 59 FKEKNPKNKSVAAVGKA 75
Score = 60 bits (144), Expect = 2e-008
Identities = 26/43 (60%), Positives = 35/43 (81%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQA 569
VGKA G++WKSLS+++KAPY AKA K K+EYNK + YNK ++
Sbjct: 72 VGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGES 114
>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
Length = 161
Score = 65 bits (158), Expect = 4e-010
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Frame = +2
Query: 131 MKGGKSRAAAPKRSDTKLXXXXX-----XXXXXXXXXXXDPNKPKRPASAFFVFMEEFRE 295
MKG KS+ AA ++D KL DPNKPKR SAFFVFM EFRE
Sbjct: 1 MKGAKSKGAA--KADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFRE 58
Query: 296 KYKKEHPNNKSVAAVSES 349
++K+++P NKSVAAV ++
Sbjct: 59 EFKQKNPKNKSVAAVGKA 76
Score = 61 bits (146), Expect = 1e-008
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQA 569
VGKA GE+WKSLS++EKAPY AKA K K EYNK + YNK ++
Sbjct: 73 VGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGES 115
>sp|Q75B82|NHP6_ASHGO Non-histone chromosomal protein 6 OS=Ashbya gossypii
GN=NHP6 PE=3 SV=1
Length = 94
Score = 51 bits (121), Expect = 8e-006
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 441 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQA 569
VG+ GEKWK+LSD EK PY+AKAE K Y ++YN +A
Sbjct: 51 VGRVLGEKWKALSDDEKQPYEAKAEADKKRYESEKELYNATKA 93
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,735,772,867
Number of Sequences: 462764
Number of Extensions: 8735772867
Number of Successful Extensions: 83663288
Number of sequences better than 0.0: 0
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