BLASTX 7.6.2
Query= RU05988 /QuerySize=1038
(1037 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FGJ3|NFYB2_ARATH Nuclear transcription factor Y subunit B-2... 212 4e-054
sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3... 196 2e-049
sp|Q67XJ2|NFYBA_ARATH Nuclear transcription factor Y subunit B-1... 185 4e-046
sp|Q8VYK4|NFYB8_ARATH Nuclear transcription factor Y subunit B-8... 182 4e-045
sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y subunit B-3... 181 6e-045
sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS... 181 6e-045
sp|Q9SLG0|NFYB1_ARATH Nuclear transcription factor Y subunit B-1... 169 3e-041
sp|Q9SIT9|NFYB7_ARATH Nuclear transcription factor Y subunit B-7... 168 5e-041
sp|Q5QMG3|NFYB2_ORYSJ Nuclear transcription factor Y subunit B-2... 167 1e-040
sp|Q65XK1|NFYB4_ORYSJ Nuclear transcription factor Y subunit B-4... 156 2e-037
sp|O82248|NFYB5_ARATH Nuclear transcription factor Y subunit B-5... 154 8e-037
sp|Q32KW0|NFYB_BOVIN Nuclear transcription factor Y subunit beta... 152 5e-036
sp|P25207|NFYB_CHICK Nuclear transcription factor Y subunit beta... 152 5e-036
sp|Q6RG77|NFYB_HORSE Nuclear transcription factor Y subunit beta... 152 5e-036
sp|P25208|NFYB_HUMAN Nuclear transcription factor Y subunit beta... 152 5e-036
sp|P63139|NFYB_MOUSE Nuclear transcription factor Y subunit beta... 152 5e-036
sp|P63140|NFYB_RAT Nuclear transcription factor Y subunit beta O... 152 5e-036
sp|Q84W66|NFYB6_ARATH Nuclear transcription factor Y subunit B-6... 151 9e-036
sp|Q9SFD8|NFYB9_ARATH Nuclear transcription factor Y subunit B-9... 145 5e-034
sp|P25210|NFYB_PETMA Nuclear transcription factor Y subunit beta... 145 6e-034
sp|P13434|HAP3_YEAST Transcriptional activator HAP3 OS=Saccharom... 136 4e-031
sp|O04027|NFYB4_ARATH Nuclear transcription factor Y subunit B-4... 131 9e-030
sp|P36611|HAP3_SCHPO Transcriptional activator hap3 OS=Schizosac... 131 1e-029
sp|P40914|HAP3_KLULA Transcriptional activator HAP3 OS=Kluyverom... 127 1e-028
sp|P25211|NFYB_XENLA Nuclear transcription factor Y subunit beta... 104 1e-021
sp|Q3SZN5|DPOE3_BOVIN DNA polymerase epsilon subunit 3 OS=Bos ta... 77 2e-013
sp|Q9NRF9|DPOE3_HUMAN DNA polymerase epsilon subunit 3 OS=Homo s... 77 2e-013
sp|Q5R4W3|DPOE3_PONAB DNA polymerase epsilon subunit 3 OS=Pongo ... 77 2e-013
sp|Q642A5|DPOE3_RAT DNA polymerase epsilon subunit 3 OS=Rattus n... 77 2e-013
sp|Q9JKP7|DPOE3_MOUSE DNA polymerase epsilon subunit 3 OS=Mus mu... 75 6e-013
>sp|Q9FGJ3|NFYB2_ARATH Nuclear transcription factor Y subunit B-2 OS=Arabidopsis
thaliana GN=NFYB2 PE=2 SV=1
Length = 190
Score = 212 bits (538), Expect = 4e-054
Identities = 103/124 (83%), Positives = 112/124 (90%)
Frame = +1
Query: 277 MADSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 456
M DSD DSGGG N +S LSPREQDR LPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1 MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60
Query: 457 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFE+YVEPLKVYLQRFRE+EGE
Sbjct: 61 ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120
Query: 637 KSSM 648
++ +
Sbjct: 121 RTGL 124
>sp|O23310|NFYB3_ARATH Nuclear transcription factor Y subunit B-3 OS=Arabidopsis
thaliana GN=NFYB3 PE=2 SV=1
Length = 161
Score = 196 bits (497), Expect = 2e-049
Identities = 99/124 (79%), Positives = 106/124 (85%), Gaps = 5/124 (4%)
Frame = +1
Query: 295 DSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 474
+ GGH G S REQDR LPIANVSRIMKKALPANAKISKDAKETVQECVSEF
Sbjct: 6 NDSGGHKDGG-----NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60
Query: 475 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSMAA 654
ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFE+YVEPLKVYLQ++RE+EGEK++ A
Sbjct: 61 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120
Query: 655 RDKD 666
R D
Sbjct: 121 RQGD 124
>sp|Q67XJ2|NFYBA_ARATH Nuclear transcription factor Y subunit B-10
OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1
Length = 176
Score = 185 bits (469), Expect = 4e-046
Identities = 94/141 (66%), Positives = 107/141 (75%), Gaps = 9/141 (6%)
Frame = +1
Query: 277 MADSDNDSGGG--HNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKET 450
MA+S GGG H S G + L+ REQDR LPIAN+SRIMK+ LP N KI+KDAKET
Sbjct: 1 MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKET 60
Query: 451 VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 630
+QECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y++PLKVYL R+REME
Sbjct: 61 MQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREME 120
Query: 631 GEK-------SSMAARDKDPS 672
G+ S A RD PS
Sbjct: 121 GDTKGSGKGGESSAKRDGQPS 141
>sp|Q8VYK4|NFYB8_ARATH Nuclear transcription factor Y subunit B-8 OS=Arabidopsis
thaliana GN=NFYB8 PE=2 SV=1
Length = 173
Score = 182 bits (461), Expect = 4e-045
Identities = 93/135 (68%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
Frame = +1
Query: 277 MADSDNDSGGG---HNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKE 447
MA+S S GG H S G + L REQDR LPIAN+SRIMK+ LPAN KI+KDAKE
Sbjct: 1 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKE 60
Query: 448 TVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREM 627
VQECVSEFISF+T EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYL R+REM
Sbjct: 61 IVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREM 120
Query: 628 EGEKSSMAARDKDPS 672
EG+ +A+ DP+
Sbjct: 121 EGDTKG-SAKGGDPN 134
>sp|Q60EQ4|NFYB3_ORYSJ Nuclear transcription factor Y subunit B-3 OS=Oryza
sativa subsp. japonica GN=NFYB3 PE=1 SV=2
Length = 185
Score = 181 bits (459), Expect = 6e-045
Identities = 93/130 (71%), Positives = 106/130 (81%), Gaps = 3/130 (2%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
+S + GGG GG + REQDR LPIAN+SRIMKKA+PAN KI+KDAKETVQEC
Sbjct: 16 ESGSPRGGGGGGGGGGGGGGV--REQDRFLPIANISRIMKKAIPANGKIAKDAKETVQEC 73
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKS 642
VSEFISFIT EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYLQ++REMEG+ S
Sbjct: 74 VSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGD-S 132
Query: 643 SMAARDKDPS 672
+ A+ D S
Sbjct: 133 KLTAKAGDGS 142
>sp|P25209|NFYB_MAIZE Nuclear transcription factor Y subunit B OS=Zea mays
GN=NFY2 PE=2 SV=1
Length = 179
Score = 181 bits (459), Expect = 6e-045
Identities = 96/137 (70%), Positives = 108/137 (78%), Gaps = 7/137 (5%)
Frame = +1
Query: 277 MADSDNDSGGG-----HNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDA 441
MA++ GGG SP G S REQDR LPIAN+SRIMKKA+PAN KI+KDA
Sbjct: 1 MAEAPASPGGGGGSHESGSPRGGGGGG-SVREQDRFLPIANISRIMKKAIPANGKIAKDA 59
Query: 442 KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFR 621
KETVQECVSEFISFIT EASDKCQREKRKTINGDDLLWAM TLGFE+Y+EPLKVYLQ++R
Sbjct: 60 KETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYR 119
Query: 622 EMEGEKSSMAARDKDPS 672
EMEG+ S + A+ D S
Sbjct: 120 EMEGD-SKLTAKSSDGS 135
>sp|Q9SLG0|NFYB1_ARATH Nuclear transcription factor Y subunit B-1 OS=Arabidopsis
thaliana GN=NFYB1 PE=2 SV=2
Length = 141
Score = 169 bits (427), Expect = 3e-041
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +1
Query: 346 SPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 525
S REQDR LPIAN+SRIMKKALP N KI KDAK+TVQECVSEFISFIT EASDKCQ+EKR
Sbjct: 18 SVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKR 77
Query: 526 KTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
KT+NGDDLLWAM TLGFE+Y+EPLK+YL R+RE+EG+
Sbjct: 78 KTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114
>sp|Q9SIT9|NFYB7_ARATH Nuclear transcription factor Y subunit B-7 OS=Arabidopsis
thaliana GN=NFYB7 PE=2 SV=1
Length = 215
Score = 168 bits (425), Expect = 5e-041
Identities = 79/96 (82%), Positives = 88/96 (91%)
Frame = +1
Query: 352 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 531
+EQDR LPIANV RIMKK LP N KISKDAKETVQECVSEFISF+TGEASDKCQREKRKT
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 532 INGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 639
INGDD++WA+TTLGFE+YV PLKVYL ++R+ EGEK
Sbjct: 95 INGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130
>sp|Q5QMG3|NFYB2_ORYSJ Nuclear transcription factor Y subunit B-2 OS=Oryza
sativa subsp. japonica GN=NFYB2 PE=2 SV=1
Length = 178
Score = 167 bits (422), Expect = 1e-040
Identities = 85/132 (64%), Positives = 105/132 (79%), Gaps = 8/132 (6%)
Frame = +1
Query: 277 MADSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQ 456
MAD+ +D G GG REQDR LPIAN+SRIMKKA+PAN KI+KDAKET+Q
Sbjct: 15 MADAGHDESGSPPRSGGV-------REQDRFLPIANISRIMKKAVPANGKIAKDAKETLQ 67
Query: 457 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 636
ECVSEFISF+T EASDKCQ+EKRKTING+DLL+AM TLGFEEYV+PLK+YL ++RE+ G+
Sbjct: 68 ECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGD 127
Query: 637 KSSMAARDKDPS 672
S ++++ D S
Sbjct: 128 -SKLSSKAGDGS 138
>sp|Q65XK1|NFYB4_ORYSJ Nuclear transcription factor Y subunit B-4 OS=Oryza
sativa subsp. japonica GN=NFYB4 PE=2 SV=2
Length = 143
Score = 156 bits (394), Expect = 2e-037
Identities = 76/123 (61%), Positives = 93/123 (75%), Gaps = 9/123 (7%)
Frame = +1
Query: 292 NDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSE 471
N GGG G +EQDR LPIAN+ RIM++A+P N KI+KD+KE+VQECVSE
Sbjct: 10 NGGGGGGGGVG---------KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSE 60
Query: 472 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSMA 651
FISFIT EASDKC +EKRKTINGDDL+W+M TLGFE+YVEPLK+YL+ +RE EG+
Sbjct: 61 FISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGSR 120
Query: 652 ARD 660
A +
Sbjct: 121 ASE 123
>sp|O82248|NFYB5_ARATH Nuclear transcription factor Y subunit B-5 OS=Arabidopsis
thaliana GN=NFYB5 PE=2 SV=1
Length = 160
Score = 154 bits (389), Expect = 8e-037
Identities = 71/96 (73%), Positives = 83/96 (86%)
Frame = +1
Query: 352 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 531
+EQDRLLPIANV RIMK LPANAK+SK+AKET+QECVSEFISF+TGEASDKC +EKRKT
Sbjct: 50 KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109
Query: 532 INGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 639
+NGDD+ WAM LGF++Y LK YL R+R +EGEK
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEK 145
>sp|Q32KW0|NFYB_BOVIN Nuclear transcription factor Y subunit beta OS=Bos taurus
GN=NFYB PE=2 SV=1
Length = 207
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 33 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 90 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>sp|P25207|NFYB_CHICK Nuclear transcription factor Y subunit beta OS=Gallus
gallus GN=NFYB PE=2 SV=2
Length = 205
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 31 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 87
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 88 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 147
>sp|Q6RG77|NFYB_HORSE Nuclear transcription factor Y subunit beta OS=Equus
caballus GN=NFYB PE=2 SV=1
Length = 207
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 33 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 90 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>sp|P25208|NFYB_HUMAN Nuclear transcription factor Y subunit beta OS=Homo
sapiens GN=NFYB PE=1 SV=2
Length = 207
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 33 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 90 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>sp|P63139|NFYB_MOUSE Nuclear transcription factor Y subunit beta OS=Mus
musculus GN=Nfyb PE=1 SV=1
Length = 207
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 33 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 90 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>sp|P63140|NFYB_RAT Nuclear transcription factor Y subunit beta OS=Rattus
norvegicus GN=Nfyb PE=1 SV=1
Length = 207
Score = 152 bits (382), Expect = 5e-036
Identities = 79/120 (65%), Positives = 94/120 (78%), Gaps = 4/120 (3%)
Frame = +1
Query: 283 DSDNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQEC 462
D DS H G S+ S REQD LPIANV+RIMK A+P KI+KDAKE VQEC
Sbjct: 33 DDTEDSMNDHEDTNG---SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQEC 89
Query: 463 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGEK 639
VSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GEK
Sbjct: 90 VSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEK 149
>sp|Q84W66|NFYB6_ARATH Nuclear transcription factor Y subunit B-6 OS=Arabidopsis
thaliana GN=NFYB6 PE=1 SV=2
Length = 234
Score = 151 bits (380), Expect = 9e-036
Identities = 70/108 (64%), Positives = 93/108 (86%), Gaps = 2/108 (1%)
Frame = +1
Query: 316 SPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGE 495
S GG + E + REQDR +PIANV RIM++ LPA+AKIS D+KET+QECVSE+ISFITGE
Sbjct: 47 SNGG--EEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGE 104
Query: 496 ASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEK 639
A+++CQRE+RKTI +D+LWAM+ LGF++Y+EPL +YL R+RE+EGE+
Sbjct: 105 ANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152
>sp|Q9SFD8|NFYB9_ARATH Nuclear transcription factor Y subunit B-9 OS=Arabidopsis
thaliana GN=NFYB9 PE=1 SV=1
Length = 208
Score = 145 bits (365), Expect = 5e-034
Identities = 67/107 (62%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
Frame = +1
Query: 352 REQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 531
REQD+ +PIANV RIM+K LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQRE+RKT
Sbjct: 28 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 87
Query: 532 INGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSMAARDKDPS 672
I +D+LWAM+ LGF+ YV+PL V++ R+RE+E ++ S A R + PS
Sbjct: 88 ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGS-ALRGEPPS 133
>sp|P25210|NFYB_PETMA Nuclear transcription factor Y subunit beta OS=Petromyzon
marinus GN=NFYB PE=2 SV=1
Length = 209
Score = 145 bits (364), Expect = 6e-034
Identities = 77/127 (60%), Positives = 98/127 (77%), Gaps = 9/127 (7%)
Frame = +1
Query: 277 MADSDND-----SGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDA 441
+ SD D + G H+ G S+ REQD LPIANV+RIMK ++P++ KI+KDA
Sbjct: 27 LQSSDGDAEGSLASGDHDESCG---SKDPYREQDIYLPIANVARIMKTSIPSSGKIAKDA 83
Query: 442 KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFR 621
KE VQECVSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK YLQ++R
Sbjct: 84 KECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYR 143
Query: 622 E-MEGEK 639
E M+GEK
Sbjct: 144 ESMKGEK 150
>sp|P13434|HAP3_YEAST Transcriptional activator HAP3 OS=Saccharomyces cerevisiae
GN=HAP3 PE=1 SV=1
Length = 144
Score = 136 bits (340), Expect = 4e-031
Identities = 65/126 (51%), Positives = 87/126 (69%)
Frame = +1
Query: 289 DNDSGGGHNSPGGYTKSELSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVS 468
D GG+ S G + + REQDR LPI NV+R+MK LP +AK+SKDAKE +QECVS
Sbjct: 15 DTQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVS 74
Query: 469 EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSM 648
E ISF+T EASD+C +KRKTING+D+L ++ LGFE Y E LK+YL ++R+ + K+ +
Sbjct: 75 ELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQALKNQL 134
Query: 649 AARDKD 666
D
Sbjct: 135 MYEQDD 140
>sp|O04027|NFYB4_ARATH Nuclear transcription factor Y subunit B-4 OS=Arabidopsis
thaliana GN=NFYB4 PE=1 SV=1
Length = 139
Score = 131 bits (328), Expect = 9e-030
Identities = 58/96 (60%), Positives = 80/96 (83%)
Frame = +1
Query: 355 EQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 534
++DRLLPIANV R+MK+ LP+NAKISK+AK+TVQEC +EFISF+T EAS+KC RE RKT+
Sbjct: 3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62
Query: 535 NGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKS 642
NGDD+ WA++TLG + Y + + +L ++RE E E++
Sbjct: 63 NGDDIWWALSTLGLDNYADAVGRHLHKYREAERERT 98
>sp|P36611|HAP3_SCHPO Transcriptional activator hap3 OS=Schizosaccharomyces
pombe GN=hap3 PE=2 SV=1
Length = 116
Score = 131 bits (327), Expect = 1e-029
Identities = 62/94 (65%), Positives = 78/94 (82%)
Frame = +1
Query: 367 LLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDD 546
LLPIANV+RIMK ALP NAKISK+AK+ VQ+CVSEFISF+TGEAS++C +EKRKTI G+D
Sbjct: 11 LLPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGED 70
Query: 547 LLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSM 648
+L A+ TLGFE Y E LK+ L ++RE + +SM
Sbjct: 71 VLLALNTLGFENYAEVLKISLTKYREQQARSASM 104
>sp|P40914|HAP3_KLULA Transcriptional activator HAP3 OS=Kluyveromyces lactis
GN=HAP3 PE=3 SV=1
Length = 205
Score = 127 bits (318), Expect = 1e-028
Identities = 60/104 (57%), Positives = 77/104 (74%)
Frame = +1
Query: 355 EQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 534
EQDR LPI NV+R+MK LPA K+SKDAKE +QECVSEFISF+T EA D+C KRKTI
Sbjct: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
Query: 535 NGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGEKSSMAARDKD 666
NG+D+L ++ LGFE Y E LK+YL ++R+ + K+ M +D
Sbjct: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKED 125
>sp|P25211|NFYB_XENLA Nuclear transcription factor Y subunit beta (Fragment)
OS=Xenopus laevis GN=nfyb PE=2 SV=1
Length = 122
Score = 104 bits (258), Expect = 1e-021
Identities = 49/64 (76%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
Frame = +1
Query: 451 VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-M 627
VQECVSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M
Sbjct: 1 VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAM 60
Query: 628 EGEK 639
+GEK
Sbjct: 61 KGEK 64
>sp|Q3SZN5|DPOE3_BOVIN DNA polymerase epsilon subunit 3 OS=Bos taurus GN=POLE3
PE=2 SV=1
Length = 147
Score = 77 bits (188), Expect = 2e-013
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 LSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 522
++ R +D LP A ++RI+K+ALP ISK+A+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 523 RKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEGEKSSMAARDKD 666
RKT+N D+L AM + F+ +V PLK L+ + RE +G+K + + KD
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKD 109
>sp|Q9NRF9|DPOE3_HUMAN DNA polymerase epsilon subunit 3 OS=Homo sapiens GN=POLE3
PE=1 SV=1
Length = 147
Score = 77 bits (188), Expect = 2e-013
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 LSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 522
++ R +D LP A ++RI+K+ALP ISK+A+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 523 RKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEGEKSSMAARDKD 666
RKT+N D+L AM + F+ +V PLK L+ + RE +G+K + + KD
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKD 109
>sp|Q5R4W3|DPOE3_PONAB DNA polymerase epsilon subunit 3 OS=Pongo abelii GN=POLE3
PE=2 SV=1
Length = 147
Score = 77 bits (188), Expect = 2e-013
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 LSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 522
++ R +D LP A ++RI+K+ALP ISK+A+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 523 RKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEGEKSSMAARDKD 666
RKT+N D+L AM + F+ +V PLK L+ + RE +G+K + + KD
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKD 109
>sp|Q642A5|DPOE3_RAT DNA polymerase epsilon subunit 3 OS=Rattus norvegicus
GN=Pole3 PE=2 SV=1
Length = 145
Score = 77 bits (188), Expect = 2e-013
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 LSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 522
++ R +D LP A ++RI+K+ALP ISK+A+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 523 RKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEGEKSSMAARDKD 666
RKT+N D+L AM + F+ +V PLK L+ + RE +G+K + + KD
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKD 109
>sp|Q9JKP7|DPOE3_MOUSE DNA polymerase epsilon subunit 3 OS=Mus musculus GN=Pole3
PE=2 SV=1
Length = 145
Score = 75 bits (183), Expect = 6e-013
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 LSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 522
++ R +D LP A ++RI+K+ALP ISK+A+ + S F+ + T A++ + K
Sbjct: 1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGK 60
Query: 523 RKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME-GEKSSMAARDKD 666
RKT+N D+L AM + F+ ++ PLK L+ +R E G+K + + KD
Sbjct: 61 RKTLNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGKKEASEQKKKD 109
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,076,592,653
Number of Sequences: 462764
Number of Extensions: 9076592653
Number of Successful Extensions: 89107062
Number of sequences better than 0.0: 0
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