BLASTX 7.6.2
Query= RU06088 /QuerySize=492
(491 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51424|RL391_ARATH 60S ribosomal protein L39-1 OS=Arabidopsis... 82 2e-015
sp|P51425|RL39_MAIZE 60S ribosomal protein L39 OS=Zea mays GN=RP... 81 3e-015
sp|P51426|RL39_ORYSJ 60S ribosomal protein L39 OS=Oryza sativa s... 81 3e-015
sp|Q8L8W6|RL392_ARATH 60S ribosomal protein L39-2 OS=Arabidopsis... 77 5e-014
sp|Q96W55|RL39_CANAL 60S ribosomal protein L39 OS=Candida albica... 68 2e-011
sp|Q6F482|RL39_PLUXY 60S ribosomal protein L39 OS=Plutella xylos... 66 1e-010
sp|P05767|RL39_SCHPO 60S ribosomal protein L39 OS=Schizosaccharo... 66 1e-010
sp|Q962S4|RL39_SPOFR 60S ribosomal protein L39 OS=Spodoptera fru... 66 1e-010
sp|Q3T051|RL39_BOVIN 60S ribosomal protein L39 OS=Bos taurus GN=... 64 3e-010
sp|Q98TF5|RL39_CHICK 60S ribosomal protein L39 OS=Gallus gallus ... 64 3e-010
sp|P62891|RL39_HUMAN 60S ribosomal protein L39 OS=Homo sapiens G... 64 3e-010
sp|Q90YS9|RL39_ICTPU 60S ribosomal protein L39 OS=Ictalurus punc... 64 3e-010
sp|P62892|RL39_MOUSE 60S ribosomal protein L39 OS=Mus musculus G... 64 3e-010
sp|P62893|RL39_RAT 60S ribosomal protein L39 OS=Rattus norvegicu... 64 3e-010
sp|Q6BHV8|RL39_DEBHA 60S ribosomal protein L39 OS=Debaryomyces h... 64 4e-010
sp|Q59GN2|R39L5_HUMAN Putative 60S ribosomal protein L39-like 5 ... 63 6e-010
sp|Q758D8|RL39_ASHGO 60S ribosomal protein L39 OS=Ashbya gossypi... 61 2e-009
sp|O16130|RL39_DROME 60S ribosomal protein L39 OS=Drosophila mel... 61 2e-009
sp|P48536|RL39_KLUMA 60S ribosomal protein L39 OS=Kluyveromyces ... 60 7e-009
sp|P04650|RL39_YEAST 60S ribosomal protein L39 OS=Saccharomyces ... 60 7e-009
sp|P52814|RL39_CAEEL 60S ribosomal protein L39 OS=Caenorhabditis... 59 9e-009
sp|Q6CW22|RL39_KLULA 60S ribosomal protein L39 OS=Kluyveromyces ... 59 9e-009
sp|Q96EH5|RL39L_HUMAN 60S ribosomal protein L39-like OS=Homo sap... 59 1e-008
>sp|P51424|RL391_ARATH 60S ribosomal protein L39-1 OS=Arabidopsis thaliana
GN=RPL39A PE=2 SV=2
Length = 51
Score = 82 bits (200), Expect = 2e-015
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSH MRQNRPIPHWIR+RTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>sp|P51425|RL39_MAIZE 60S ribosomal protein L39 OS=Zea mays GN=RPL39 PE=3 SV=1
Length = 51
Score = 81 bits (198), Expect = 3e-015
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSH MRQNRPIP+WIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>sp|P51426|RL39_ORYSJ 60S ribosomal protein L39 OS=Oryza sativa subsp. japonica
GN=RPL39 PE=3 SV=2
Length = 51
Score = 81 bits (198), Expect = 3e-015
Identities = 37/51 (72%), Positives = 38/51 (74%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSH MRQNRPIP+WIRMRTDNTIR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>sp|Q8L8W6|RL392_ARATH 60S ribosomal protein L39-2 OS=Arabidopsis thaliana
GN=RPL39B PE=2 SV=1
Length = 51
Score = 77 bits (187), Expect = 5e-014
Identities = 35/51 (68%), Positives = 37/51 (72%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLGF 205
MPSH MRQNRPIP+WIR+RTDN IR NAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
>sp|Q96W55|RL39_CANAL 60S ribosomal protein L39 OS=Candida albicans GN=RPL39
PE=3 SV=1
Length = 51
Score = 68 bits (165), Expect = 2e-011
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
MPS +QNRP+P WIR+RTDN IR NAKRRHWRRTKLG
Sbjct: 1 MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLG 50
>sp|Q6F482|RL39_PLUXY 60S ribosomal protein L39 OS=Plutella xylostella GN=RpL39
PE=3 SV=1
Length = 51
Score = 66 bits (159), Expect = 1e-010
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
M +H ++QNRPIP W+RMRT NTIR NAKRRHWRRTKL
Sbjct: 1 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
>sp|P05767|RL39_SCHPO 60S ribosomal protein L39 OS=Schizosaccharomyces pombe
GN=rpl39 PE=2 SV=3
Length = 51
Score = 66 bits (159), Expect = 1e-010
Identities = 29/49 (59%), Positives = 31/49 (63%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
MPSH RQNRPIP WIR+RT NT+ N KRRHWRRTKL
Sbjct: 1 MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKL 49
>sp|Q962S4|RL39_SPOFR 60S ribosomal protein L39 OS=Spodoptera frugiperda
GN=RpL39 PE=3 SV=1
Length = 51
Score = 66 bits (159), Expect = 1e-010
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
M +H ++QNRPIP W+RMRT NTIR NAKRRHWRRTKL
Sbjct: 1 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
>sp|Q3T051|RL39_BOVIN 60S ribosomal protein L39 OS=Bos taurus GN=RPL39 PE=3
SV=3
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|Q98TF5|RL39_CHICK 60S ribosomal protein L39 OS=Gallus gallus GN=RPL39 PE=3
SV=1
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFKIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|P62891|RL39_HUMAN 60S ribosomal protein L39 OS=Homo sapiens GN=RPL39 PE=2
SV=2
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|Q90YS9|RL39_ICTPU 60S ribosomal protein L39 OS=Ictalurus punctatus GN=rpl39
PE=3 SV=1
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MASHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|P62892|RL39_MOUSE 60S ribosomal protein L39 OS=Mus musculus GN=Rpl39 PE=2
SV=2
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|P62893|RL39_RAT 60S ribosomal protein L39 OS=Rattus norvegicus GN=Rpl39 PE=1
SV=2
Length = 51
Score = 64 bits (155), Expect = 3e-010
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
>sp|Q6BHV8|RL39_DEBHA 60S ribosomal protein L39 OS=Debaryomyces hansenii
GN=RPL39 PE=3 SV=1
Length = 51
Score = 64 bits (154), Expect = 4e-010
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
MPS +QNRP+P WIR+R+ NTIR NAKRRHWRRTKL
Sbjct: 1 MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRSGNTIRYNAKRRHWRRTKL 49
>sp|Q59GN2|R39L5_HUMAN Putative 60S ribosomal protein L39-like 5 OS=Homo sapiens
GN=RPL39P5 PE=5 SV=2
Length = 51
Score = 63 bits (152), Expect = 6e-010
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WIRM+T N IR N+KRRHW+RTKLG
Sbjct: 1 MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLG 50
>sp|Q758D8|RL39_ASHGO 60S ribosomal protein L39 OS=Ashbya gossypii GN=RPL39 PE=3
SV=3
Length = 51
Score = 61 bits (147), Expect = 2e-009
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2
Query: 107 QNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
QNRP+P W R++T+NTIR NAKRRHWRRTK+G
Sbjct: 19 QNRPLPQWFRLKTNNTIRYNAKRRHWRRTKMG 50
>sp|O16130|RL39_DROME 60S ribosomal protein L39 OS=Drosophila melanogaster
GN=RpL39 PE=2 SV=2
Length = 51
Score = 61 bits (147), Expect = 2e-009
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
M +H ++QNR +P W+R+RT NTIR NAKRRHWRRTKL
Sbjct: 1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
>sp|P48536|RL39_KLUMA 60S ribosomal protein L39 OS=Kluyveromyces marxianus
GN=RPL39 PE=3 SV=2
Length = 51
Score = 60 bits (143), Expect = 7e-009
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +2
Query: 107 QNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
QNRP+P W R++T+NTIR NAKRRHWRRTKL
Sbjct: 19 QNRPLPQWFRLKTNNTIRYNAKRRHWRRTKL 49
>sp|P04650|RL39_YEAST 60S ribosomal protein L39 OS=Saccharomyces cerevisiae
GN=RPL39 PE=1 SV=3
Length = 51
Score = 60 bits (143), Expect = 7e-009
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +2
Query: 104 RQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
+QNRP+P WIR+RT+NTIR NAKRR+WRRTK+
Sbjct: 18 KQNRPLPQWIRLRTNNTIRYNAKRRNWRRTKM 49
>sp|P52814|RL39_CAEEL 60S ribosomal protein L39 OS=Caenorhabditis elegans
GN=rpl-39 PE=2 SV=1
Length = 51
Score = 59 bits (142), Expect = 9e-009
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = +2
Query: 104 RQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKL 199
+QNRP+P W+RM+T NT++ NAKRRHWRRTKL
Sbjct: 18 KQNRPMPQWVRMKTGNTMKYNAKRRHWRRTKL 49
>sp|Q6CW22|RL39_KLULA 60S ribosomal protein L39 OS=Kluyveromyces lactis GN=RPL39
PE=3 SV=3
Length = 51
Score = 59 bits (142), Expect = 9e-009
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +2
Query: 107 QNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
QNRP+P W R++T+N IR NAKRRHWRRTKLG
Sbjct: 19 QNRPLPQWYRLKTNNKIRYNAKRRHWRRTKLG 50
>sp|Q96EH5|RL39L_HUMAN 60S ribosomal protein L39-like OS=Homo sapiens GN=RPL39L
PE=1 SV=3
Length = 51
Score = 59 bits (141), Expect = 1e-008
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2
Query: 53 MPSHXXXXXXXXXXXXMRQNRPIPHWIRMRTDNTIRDNAKRRHWRRTKLG 202
M SH +QNRPIP WI+M+ + IR N+KRRHWRRTKLG
Sbjct: 1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLG 50
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,076,592,653
Number of Sequences: 462764
Number of Extensions: 9076592653
Number of Successful Extensions: 89107062
Number of sequences better than 0.0: 0
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