BLASTX 7.6.2
Query= RU07222 /QuerySize=428
(427 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein... 55 1e-007
sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ... 53 4e-007
sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containin... 52 1e-006
sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein... 51 2e-006
sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein... 51 2e-006
sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ... 50 3e-006
sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZF... 50 4e-006
sp|Q6NPN3|ZFNL3_ARATH Zinc finger CCCH domain-containing protein... 49 8e-006
>sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein ZFN-like 5
OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 55 bits (130), Expect = 1e-007
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CTHYSRYGICKFGPAC+FDH + T S +S
Sbjct: 386 CTHYSRYGICKFGPACRFDHSIPPTFSPSS 415
>sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ZFN1
OS=Arabidopsis thaliana GN=ZFN1 PE=2 SV=1
Length = 397
Score = 53 bits (126), Expect = 4e-007
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTS--STTSGLDHQLPFS-------DLANTKEAGIAR 272
C Y+RYGICKFGP+CKFDHP+ + + +T S D + S ++ T++A A
Sbjct: 326 CVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETDEVVETSTGKSRRLSVSETRQA--AT 383
Query: 271 SRSGTDDTIQLQQ 233
+ SG D TI Q
Sbjct: 384 TSSGKDTTIDNTQ 396
>sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containing protein
ZFN-like 6 OS=Arabidopsis thaliana GN=At3g48440 PE=3 SV=1
Length = 448
Score = 52 bits (123), Expect = 1e-006
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CT+YSRYGICKFGPAC+FDH + ST S
Sbjct: 398 CTYYSRYGICKFGPACRFDHSVQPPYSTES 427
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza
sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 51 bits (120), Expect = 2e-006
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPL 359
CT YSRYGICKFGP CKFDHP+
Sbjct: 361 CTFYSRYGICKFGPNCKFDHPM 382
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza
sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 51 bits (120), Expect = 2e-006
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPL 359
CT YSRYGICKFGP CKFDHP+
Sbjct: 370 CTFYSRYGICKFGPNCKFDHPM 391
>sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ZFN3
OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 50 bits (119), Expect = 3e-006
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHL 353
C YSRYGICKFGP+CKFDHP+ +
Sbjct: 295 CVFYSRYGICKFGPSCKFDHPMRV 318
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 50 bits (118), Expect = 4e-006
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPL 359
C YSRYGICKFGP+CKFDHP+
Sbjct: 330 CVFYSRYGICKFGPSCKFDHPM 351
>sp|Q6NPN3|ZFNL3_ARATH Zinc finger CCCH domain-containing protein ZFN-like 3
OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 49 bits (115), Expect = 8e-006
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 424 CTHYSRYGICKFGPACKFDHPLHLTSSTTS 335
CTH++++GICKFGPACKFDH L +S + S
Sbjct: 351 CTHFAQHGICKFGPACKFDHSLGSSSLSYS 380
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,513,639,154
Number of Sequences: 462764
Number of Extensions: 12513639154
Number of Successful Extensions: 124453114
Number of sequences better than 0.0: 0
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