BLASTX 7.6.2
Query= RU08593 /QuerySize=455
(454 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein ... 186 7e-047
sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein... 92 1e-018
sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ... 86 9e-017
sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZF... 84 4e-016
sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein... 82 1e-015
sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ... 82 1e-015
sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein ... 76 6e-014
sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containin... 76 7e-014
sp|Q84W91|ZFNL1_ARATH Zinc finger CCCH domain-containing protein... 58 2e-008
sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein... 55 1e-007
sp|Q94AD9|ZFNL4_ARATH Zinc finger CCCH domain-containing protein... 55 2e-007
sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein ... 52 9e-007
sp|Q9SQU4|ZFNL2_ARATH Zinc finger CCCH domain-containing protein... 52 9e-007
sp|Q6NPN3|ZFNL3_ARATH Zinc finger CCCH domain-containing protein... 52 1e-006
sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein... 51 2e-006
sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein... 51 2e-006
sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein... 51 3e-006
sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein... 50 3e-006
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza
sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 186 bits (470), Expect = 7e-047
Identities = 83/138 (60%), Positives = 102/138 (73%), Gaps = 2/138 (1%)
Frame = +3
Query: 39 APDAEPGPPGFKRTSEALYHQALLGAHNPIGQMEAWYSTNPLAKRPRFENTSLPIYPQRP 218
A D + G +R+ LYHQ ++G+H+ + Q+EA YS+N + KRPR E +SLPIYPQRP
Sbjct: 48 AADLDARLAGARRSMGVLYHQPIMGSHSTVEQIEALYSSNTMTKRPRLE-SSLPIYPQRP 106
Query: 219 GEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSESLPERPGAPDCPYF 398
GEKDC YM TRTCKFG CKFDHP WVP+GGIP+WKE ES PE+ G PDCP+F
Sbjct: 107 GEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKE-QAANVEESYPEQEGEPDCPFF 165
Query: 399 LKTQRCKFGLRCKFNHPK 452
+KT +CKFG +CKFNHPK
Sbjct: 166 MKTGKCKFGSKCKFNHPK 183
Score = 82 bits (201), Expect = 1e-015
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDG-GIPDWKEVPLVAPSESLPERPGA 380
YP++ GE DC +M+T CKFG CKF+HP + + + L+A S LP RP
Sbjct: 153 YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSE 212
Query: 381 PDCPYFLKTQRCKFGLRCKFNHPK 452
P C ++ KT +CKF CKFNHPK
Sbjct: 213 PLCSFYAKTGKCKFRAMCKFNHPK 236
Score = 51 bits (121), Expect = 2e-006
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 351 SESLPERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
S+ LP RPG DCP+++K CKFG C+FNHP
Sbjct: 282 SKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHP 314
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza
sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 92 bits (227), Expect = 1e-018
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSESLPERPGAP 383
+P+RPGE DC +Y++ +CKFG C ++HP P G D K P+E P RPG P
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKK------PAEQFPRRPGEP 94
Query: 384 DCPYFLKTQRCKFGLRCKFNHP 449
DC Y++K CKFG+ C+FNHP
Sbjct: 95 DCSYYVKFGSCKFGMNCRFNHP 116
>sp|Q8GXX7|ZFN1_ARATH Zinc finger CCCH domain-containing protein ZFN1
OS=Arabidopsis thaliana GN=ZFN1 PE=2 SV=1
Length = 397
Score = 86 bits (210), Expect = 9e-017
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 19/115 (16%)
Frame = +3
Query: 120 NPIGQMEAWYSTNPLAKRPRFENTSLPIYPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIW 299
+P+ +A + N L+ E S YP+RPGE DC +Y++T C+FG C+F+HP
Sbjct: 13 SPLMNQDAMWQMN-LSSDETMETGS---YPERPGEPDCSYYIRTGLCRFGSTCRFNHP-- 66
Query: 300 VPDGGIPDWKEVPLVAPSESL----PERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
++ LV + + PER G P+C Y+LKT CKFG+ CKF+HP+
Sbjct: 67 ---------RDRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPR 112
Score = 51 bits (121), Expect = 2e-006
Identities = 20/36 (55%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +3
Query: 348 PSESL-PERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
P E++ PERPG P+C +++KT CKFG CKF+HP+
Sbjct: 266 PRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPR 301
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 84 bits (205), Expect = 4e-016
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWK-EVPLVAPSESLPERPGA 380
YP+ PGE DC +Y++T C+FG C+F+HP P+ K + PER G
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHP--------PNRKLAIATARMKGEFPERLGQ 78
Query: 381 PDCPYFLKTQRCKFGLRCKFNHPK 452
P+C Y+LKT CKFG C+F+HPK
Sbjct: 79 PECQYYLKTGTCKFGATCRFHHPK 102
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza
sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 82 bits (200), Expect = 1e-015
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSESLPERPGAP 383
YP+R GE DC +Y++T C+FG C+F+HP D + + PER G P
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHP---QDRNL----AIASARMKGEYPERMGQP 129
Query: 384 DCPYFLKTQRCKFGLRCKFNHPK 452
+C Y+LKT CKFG CKF+HP+
Sbjct: 130 ECQYYLKTGTCKFGPTCKFHHPR 152
>sp|Q8L7N8|ZFN3_ARATH Zinc finger type domain-containing protein ZFN3
OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 82 bits (200), Expect = 1e-015
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSE-SLPERPGA 380
YP+R GE DC +Y++T C+FG C+F+HP D K V A + PER G
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHP--------HDRKLVIATARIKGEYPERIGQ 90
Query: 381 PDCPYFLKTQRCKFGLRCKFNHPK 452
P+C ++LKT CKFG+ CKF+HP+
Sbjct: 91 PECEFYLKTGTCKFGVTCKFHHPR 114
Score = 52 bits (123), Expect = 1e-006
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +3
Query: 312 GIPDWKEVPL---VAPSESL-PERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
G VPL P E++ PERPG P+C +++KT CKFG CKF+HP+
Sbjct: 220 GFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPR 270
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza
sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 76 bits (186), Expect = 6e-014
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Frame = +3
Query: 174 PRFENTSLPIYPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPS 353
P + P +P RPG+ +C +Y++T +CKFG CK+ HP ++ K +++P
Sbjct: 286 PSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTP-----KSNCMLSPL 340
Query: 354 ESLPERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
LP RPG+ C Y+ + CKFG CKF+HP
Sbjct: 341 -GLPLRPGSQPCAYYTQHGFCKFGPTCKFDHP 371
Score = 51 bits (121), Expect = 2e-006
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHP 293
YP+RPG+ C +YM+ TCKFG CK+DHP
Sbjct: 98 YPERPGQPVCEYYMKNGTCKFGSNCKYDHP 127
Score = 50 bits (119), Expect = 3e-006
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 357 SLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
+ P RPG P+C Y+LKT CKFG CK++HP+
Sbjct: 295 AFPARPGQPECQYYLKTGSCKFGSACKYHHPQ 326
>sp|Q9STM4|ZFNL6_ARATH Putative zinc finger CCCH domain-containing protein
ZFN-like 6 OS=Arabidopsis thaliana GN=At3g48440 PE=3 SV=1
Length = 448
Score = 76 bits (185), Expect = 7e-014
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 183 ENTSLPIYPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSESL 362
EN S +YP RPG +DC YM+T +CKFG CKF+HP+ D K V E
Sbjct: 100 ENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNK----VREKEDD 155
Query: 363 PERPGAPDCPYFLKTQRCKFGLRCKFNH 446
+ G DC Y+ +T CK+G C+FNH
Sbjct: 156 GGKLGLIDCKYYFRTGGCKYGETCRFNH 183
Score = 53 bits (126), Expect = 5e-007
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 348 PSESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
P+E PERP P+C Y++KT CKF CK++HPK
Sbjct: 339 PAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPK 373
>sp|Q84W91|ZFNL1_ARATH Zinc finger CCCH domain-containing protein ZFN-like 1
OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 58 bits (138), Expect = 2e-008
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 8/59 (13%)
Frame = +3
Query: 291 PIWVP---DGGIPD--WKEVPLVAPSESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
P W P D G+ + W+ L S+S PERPGAPDC Y+++T C +G RC++NHP+
Sbjct: 17 PDWTPADADTGLQESMWR---LGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR 72
Score = 56 bits (133), Expect = 8e-008
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 339 LVAPSESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
++ ++ PERPG P+C Y+LKT CKFG CKF+HP+
Sbjct: 279 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPR 316
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza
sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 55 bits (131), Expect = 1e-007
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Frame = +3
Query: 285 DHPIW-VPDGGIPDWKEVPLVAPSESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
+HP++ P+ IP ++V PSE PERPG P+C +F+K+ CKF ++CK++HP+
Sbjct: 410 NHPMYKAPE--IPGHQQV----PSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPR 460
Score = 52 bits (124), Expect = 9e-007
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 363 PERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
P RPG PDC Y++K C+FG++CKFNHP
Sbjct: 106 PRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>sp|Q94AD9|ZFNL4_ARATH Zinc finger CCCH domain-containing protein ZFN-like 4
OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 55 bits (130), Expect = 2e-007
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 354 ESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
E LPER G PDC YFLKT CK+G CK++HPK
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPK 117
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza
sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 52 bits (124), Expect = 9e-007
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 363 PERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
PERPG PDC Y+++T CKFG CK++HP+
Sbjct: 305 PERPGQPDCQYYMRTGDCKFGATCKYHHPR 334
Score = 51 bits (120), Expect = 3e-006
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 360 LPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
LPERPG DC Y+L+T C FG RC++NHP+
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPR 86
>sp|Q9SQU4|ZFNL2_ARATH Zinc finger CCCH domain-containing protein ZFN-like 2
OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 52 bits (124), Expect = 9e-007
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 354 ESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
ES PERP PDC Y+L+T C +G RC+FNHP+
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPR 81
Score = 52 bits (122), Expect = 1e-006
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHPIWVPDGGIPDWKEVPLVAPSESL 362
YP RPGEK+C +Y++T CKFG C+F+HP+ + G P + P L
Sbjct: 145 YPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQL 197
>sp|Q6NPN3|ZFNL3_ARATH Zinc finger CCCH domain-containing protein ZFN-like 3
OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 52 bits (122), Expect = 1e-006
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 354 ESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
E+ PERP PDC Y+L+T C +G RC+FNHP+
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPR 78
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza
sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 51 bits (121), Expect = 2e-006
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 351 SESLPERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
S PER G PDC Y+++T C+FG+ CKFNHP
Sbjct: 60 STPYPERIGEPDCSYYMRTGLCRFGMTCKFNHP 92
>sp|Q5RJC5|ZFNL5_ARATH Zinc finger CCCH domain-containing protein ZFN-like 5
OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 51 bits (121), Expect = 2e-006
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 354 ESLPERPGAPDCPYFLKTQRCKFGLRCKFNHPK 452
E PERP P+C Y+LKT CKF +CK++HPK
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPK 361
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza
sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 51 bits (120), Expect = 3e-006
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 363 PERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
PER G PDC Y+++T C+FG+ CKFNHP
Sbjct: 54 PERIGEPDCSYYMRTGLCRFGMTCKFNHP 82
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza
sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 50 bits (119), Expect = 3e-006
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 204 YPQRPGEKDCVHYMQTRTCKFGEGCKFDHP 293
+PQRPGE DC+HY++ CK+G C+F+HP
Sbjct: 117 HPQRPGEHDCLHYLRFGRCKYGMNCRFNHP 146
Score = 50 bits (119), Expect = 3e-006
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VAPSESLPERPGAPDCPYFLKTQRCKFGLRCKFNHP 449
V P E P RPG PDC Y+++ CKFG+RC +NHP
Sbjct: 71 VEPQE-YPRRPGVPDCSYYVEFGSCKFGMRCLYNHP 105
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,513,639,154
Number of Sequences: 462764
Number of Extensions: 12513639154
Number of Successful Extensions: 124453114
Number of sequences better than 0.0: 0
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