BLASTX 7.6.2
Query= RU08759 /QuerySize=822
(821 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=... 57 1e-007
sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Ra... 57 1e-007
sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=... 57 2e-007
sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=... 52 3e-006
sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=... 52 3e-006
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens
GN=FUBP1 PE=1 SV=3
Length = 644
Score = 57 bits (136), Expect = 1e-007
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 565 GGSAPSTNQG-FNSMPPGG-EQFVMKVPNNKVALIIGKGGETIRNMQTKSGARIQIVPLH 738
GG QG +N PPGG ++F VP K LIIGKGGETI+++ +SGARI++ +
Sbjct: 357 GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL-QRN 415
Query: 739 LPPGDMSTERSVYINGGAEQFEAAKEL 819
PP + I G +Q + A++L
Sbjct: 416 PPPNADPNMKLFTIRGTPQQIDYARQL 442
Score = 56 bits (133), Expect = 3e-007
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Frame = +1
Query: 481 RDVELTGTSGQISRAEQLINDVIAEADAGGSAPSTNQGFNSMPPGGEQFVMKVPNNKVAL 660
R LTGT + A++L++ ++ + G AP + G PG + +P +K L
Sbjct: 146 RSCMLTGTPESVQSAKRLLDQIV---EKGRPAPGFHHGDG---PGNAVQEIMIPASKAGL 199
Query: 661 IIGKGGETIRNMQTKSGARIQIVPLHLPPGDMSTERSVYINGGAEQFEAAKEL 819
+IGKGGETI+ +Q ++G +++V + P + ++ + I G + + AKE+
Sbjct: 200 VIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEM 250
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 57 bits (136), Expect = 1e-007
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 565 GGSAPSTNQG-FNSMPPGG-EQFVMKVPNNKVALIIGKGGETIRNMQTKSGARIQIVPLH 738
GG QG +N PPGG ++F VP K LIIGKGGETI+++ +SGARI++ +
Sbjct: 352 GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL-QRN 410
Query: 739 LPPGDMSTERSVYINGGAEQFEAAKEL 819
PP + I G +Q + A++L
Sbjct: 411 PPPNADPNMKLFTIRGTPQQIDYARQL 437
Score = 56 bits (133), Expect = 3e-007
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Frame = +1
Query: 481 RDVELTGTSGQISRAEQLINDVIAEADAGGSAPSTNQGFNSMPPGGEQFVMKVPNNKVAL 660
R LTGT + A++L++ ++ + G AP + G PG + +P +K L
Sbjct: 141 RSCMLTGTPESVQSAKRLLDQIV---EKGRPAPGFHHGDG---PGNAVQEIMIPASKAGL 194
Query: 661 IIGKGGETIRNMQTKSGARIQIVPLHLPPGDMSTERSVYINGGAEQFEAAKEL 819
+IGKGGETI+ +Q ++G +++V + P + ++ + I G + + AKE+
Sbjct: 195 VIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEM 245
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus
GN=Fubp1 PE=1 SV=1
Length = 651
Score = 57 bits (135), Expect = 2e-007
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +1
Query: 565 GGSAPSTNQG-FNSMPPGG-EQFVMKVPNNKVALIIGKGGETIRNMQTKSGARIQIVPLH 738
GG QG +N PPGG ++F VP K LIIGKGGETI+++ +SGARI++
Sbjct: 353 GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL--QR 410
Query: 739 LPPGDMSTERSVY-INGGAEQFEAAKEL 819
PP + ++ I G +Q + A++L
Sbjct: 411 SPPPNADPNMKLFTIRGTPQQIDYARQL 438
Score = 56 bits (133), Expect = 3e-007
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Frame = +1
Query: 481 RDVELTGTSGQISRAEQLINDVIAEADAGGSAPSTNQGFNSMPPGGEQFVMKVPNNKVAL 660
R LTGT + A++L++ ++ + G AP + G PG + +P +K L
Sbjct: 142 RSCMLTGTPESVQSAKRLLDQIV---EKGRPAPGFHHGDG---PGNAVQEIMIPASKAGL 195
Query: 661 IIGKGGETIRNMQTKSGARIQIVPLHLPPGDMSTERSVYINGGAEQFEAAKEL 819
+IGKGGETI+ +Q ++G +++V + P + ++ + I G + + AKE+
Sbjct: 196 VIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEM 246
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens
GN=KHSRP PE=1 SV=3
Length = 710
Score = 52 bits (124), Expect = 3e-006
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 481 RDVELTGTSGQISRAEQLINDVIAEADAGGSAPSTNQGFNSMPPGGEQFVMKVPNNKVAL 660
R V LTG + +A+ +++D+++ GG + N G Q +M +P K L
Sbjct: 190 RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGL 247
Query: 661 IIGKGGETIRNMQTKSGARIQIV 729
+IGKGGETI+ +Q ++G ++ ++
Sbjct: 248 VIGKGGETIKQLQERAGVKMILI 270
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus
GN=Khsrp PE=1 SV=1
Length = 748
Score = 52 bits (124), Expect = 3e-006
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 481 RDVELTGTSGQISRAEQLINDVIAEADAGGSAPSTNQGFNSMPPGGEQFVMKVPNNKVAL 660
R V LTG + +A+ +++D+++ GG + N G Q +M +P K L
Sbjct: 191 RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGL 248
Query: 661 IIGKGGETIRNMQTKSGARIQIV 729
+IGKGGETI+ +Q ++G ++ ++
Sbjct: 249 VIGKGGETIKQLQERAGVKMILI 271
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,513,639,154
Number of Sequences: 462764
Number of Extensions: 12513639154
Number of Successful Extensions: 124453114
Number of sequences better than 0.0: 0
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