BLASTX 7.6.2
Query= RU10088 /QuerySize=441
(440 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arab... 126 4e-029
sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryz... 68 1e-011
sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arab... 68 1e-011
sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arab... 62 8e-010
sp|P33179|NIFU_ANASL Nitrogen fixation protein nifU (Fragment) O... 49 9e-006
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis
thaliana GN=NIFU1 PE=1 SV=1
Length = 231
Score = 126 bits (316), Expect = 4e-029
Identities = 66/99 (66%), Positives = 74/99 (74%)
Frame = -3
Query: 381 GLYSAKQFELTVPNVDLVLEDVRPYLIAXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTT 202
GLYSA+ F+LT NVDLVLEDVRP+LI+ SLKLQGAC SCPSS+TT
Sbjct: 76 GLYSAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTT 135
Query: 201 MKMGIERVLKEKSGDALKDIQQVFDEENRMTTVEAVSTH 85
M MGIERVLKEK GDALKDI+QVFDEE + TVEAV+ H
Sbjct: 136 MTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAH 174
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp.
japonica GN=NIFU1 PE=1 SV=1
Length = 226
Score = 68 bits (165), Expect = 1e-011
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = -3
Query: 372 SAKQFELTVPNVDLVLEDVRPYLIAXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTTMKM 193
+A Q LT NV+ VL+ VRPYL A LKLQGACGSCPSS T+K
Sbjct: 69 TAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKR 128
Query: 192 GIERVLKEKSGDALKDIQQVFDEE 121
GIER L EK D + ++ V D+E
Sbjct: 129 GIERRLMEKIPD-VAAVEPVTDKE 151
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis
thaliana GN=NIFU2 PE=1 SV=1
Length = 235
Score = 68 bits (165), Expect = 1e-011
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -3
Query: 354 LTVPNVDLVLEDVRPYLIAXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTTMKMGIERVL 175
LT NV+ VL+++RPYL++ +KLQGACGSCPSST TMKMGIER L
Sbjct: 85 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 174 KEKSGDALKDIQQVFDEE 121
EK + + ++ + DEE
Sbjct: 145 MEKIPEIVA-VEALPDEE 161
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis
thaliana GN=NIFU3 PE=2 SV=1
Length = 236
Score = 62 bits (150), Expect = 8e-010
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -3
Query: 354 LTVPNVDLVLEDVRPYLIAXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTTMKMGIERVL 175
LT NV+ VL++VRP L+A LKLQGACGSCPSS+ T+KMGIE L
Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 174 KEKSGDALKDIQQVFDEE 121
++K + + ++Q + E
Sbjct: 144 RDKIPE-IMSVEQFLESE 160
>sp|P33179|NIFU_ANASL Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp.
(strain L31) GN=nifU PE=3 SV=1
Length = 112
Score = 49 bits (115), Expect = 9e-006
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = -3
Query: 324 EDVRPYLIAXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTTMKMGIERVLKEKSGDAL 151
E+VRP LIA + LQGACGSCPSST T+K+ IE L+++ +L
Sbjct: 50 EEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSL 107
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,192,140,658
Number of Sequences: 462764
Number of Extensions: 15192140658
Number of Successful Extensions: 146257600
Number of sequences better than 0.0: 0
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