BLASTX 7.6.2
Query= RU12004 /QuerySize=409
(408 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thalia... 96 5e-020
sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thalia... 86 5e-017
sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thalia... 85 8e-017
sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thalia... 81 9e-016
sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thalia... 71 1e-012
sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis ... 61 1e-009
sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thalia... 55 5e-008
sp|Q39264|ZFP5_ARATH Zinc finger protein 5 OS=Arabidopsis thalia... 50 3e-006
sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EA... 49 4e-006
sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabid... 49 4e-006
>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2
SV=1
Length = 228
Score = 96 bits (236), Expect = 5e-020
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 15/94 (15%)
Frame = -3
Query: 373 EAAIPRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKR--------------ALRMGMF 236
+ A PRVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKR A G
Sbjct: 61 QLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHG 120
Query: 235 PDHRYTSLASLPLHGSSASAFRSLGIEAHAAMHQ 134
R+ S+ASLPLHG S + +LGI+AH+ +H+
Sbjct: 121 SVSRFASMASLPLHG-SVNNRSTLGIQAHSTIHK 153
>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2
SV=1
Length = 209
Score = 86 bits (210), Expect = 5e-017
Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 6/73 (8%)
Frame = -3
Query: 367 AIPRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRALRMG-MFPDHR----YTSLASL 203
A PRVFSCNYC+RKF+SSQALGGHQNAHKRERTMAKRA+ MG MF H YTS +SL
Sbjct: 54 ANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTS-SSL 112
Query: 202 PLHGSSASAFRSL 164
+ S +L
Sbjct: 113 GMQAHSGLLHHTL 125
>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2
SV=1
Length = 235
Score = 85 bits (208), Expect = 8e-017
Identities = 44/78 (56%), Positives = 54/78 (69%), Gaps = 5/78 (6%)
Frame = -3
Query: 358 RVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRALRMGMFPD---HRYTSLASLPLHGS 188
++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR RM H Y + LP HG
Sbjct: 59 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPY-GFSPLPFHG- 116
Query: 187 SASAFRSLGIEAHAAMHQ 134
+ RSLGI+AH+ H+
Sbjct: 117 QYNNHRSLGIQAHSISHK 134
>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2
SV=2
Length = 260
Score = 81 bits (199), Expect = 9e-016
Identities = 35/40 (87%), Positives = 40/40 (100%)
Frame = -3
Query: 358 RVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRALRMGM 239
RVFSCNYC+RKF+SSQALGGHQNAHKRERT+AKRA+RMG+
Sbjct: 83 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGL 122
>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2
SV=1
Length = 150
Score = 71 bits (173), Expect = 1e-012
Identities = 30/36 (83%), Positives = 35/36 (97%)
Frame = -3
Query: 361 PRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRA 254
PRVFSCNYC+RKF+SSQALGGHQNAHK ERT+AK++
Sbjct: 49 PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84
>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU
PE=1 SV=1
Length = 161
Score = 61 bits (147), Expect = 1e-009
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = -3
Query: 358 RVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRAL 251
R+F C YC RKF++SQALGGHQNAHKRER A+R L
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNL 71
>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2
SV=1
Length = 197
Score = 55 bits (132), Expect = 5e-008
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -3
Query: 403 NSEIEAAPDS-EAAIPRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKRA 254
N E P S + R + C YC R+F +SQALGGHQNAHK+ER + KRA
Sbjct: 23 NQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRA 73
>sp|Q39264|ZFP5_ARATH Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2
SV=1
Length = 211
Score = 50 bits (117), Expect = 3e-006
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -3
Query: 346 CNYCKRKFFSSQALGGHQNAHKRERTMAKR-ALRMGMFPDHRYTSLASLPLHGSSASAFR 170
C YC ++F +SQALGGHQNAHK+ER KR L+ Y + P+ S ++
Sbjct: 62 CQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSFQRQYK 121
Query: 169 SLGIEAHAAMHQN 131
+ A ++MH N
Sbjct: 122 TPSYCAFSSMHVN 134
>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS
OS=Arabidopsis thaliana GN=RBE PE=2 SV=2
Length = 226
Score = 49 bits (116), Expect = 4e-006
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -3
Query: 361 PRVFSCNYCKRKFFSSQALGGHQNAHKRERTMAKR 257
PR +SC++C R+F S+QALGGH N H+R+R K+
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ 86
>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana
GN=SUP PE=1 SV=1
Length = 204
Score = 49 bits (116), Expect = 4e-006
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = -3
Query: 361 PRVFSCNYCKRKFFSSQALGGHQNAHKRER 272
PR ++C++CKR+F S+QALGGH N H+R+R
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 73
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,192,140,658
Number of Sequences: 462764
Number of Extensions: 15192140658
Number of Successful Extensions: 146257600
Number of sequences better than 0.0: 0
|