BLASTX 7.6.2
Query= RU12312 /QuerySize=359
(358 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein... 124 2e-028
sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein... 119 6e-027
sp|Q7XPK1|C3H31_ORYSJ Zinc finger CCCH domain-containing protein... 70 3e-012
sp|Q84UQ3|C3H56_ORYSJ Zinc finger CCCH domain-containing protein... 48 9e-006
>sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein 14 OS=Oryza
sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1
Length = 300
Score = 124 bits (309), Expect = 2e-028
Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
Frame = -2
Query: 357 EHESDPKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRNPSMGASQG---SSNFK 187
+HESD L+NIELEGTFDQIK+ASAMV+++IV++ A P + P G+ +G SNFK
Sbjct: 208 DHESDTNLKNIELEGTFDQIKNASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGPGSNFK 267
Query: 186 TKLCENFTKGQCTFGDRCHFAHGAEELRR 100
TKLCENFTKG CTFGDRCHFAHG ELR+
Sbjct: 268 TKLCENFTKGSCTFGDRCHFAHGENELRK 296
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza
sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 119 bits (296), Expect = 6e-027
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 3/88 (3%)
Frame = -2
Query: 357 EHESDPKLRNIELEGTFDQIKDASAMVQDIIVNVSSAAGPHMRNPSMGASQG--SSNFKT 184
++ES+P L+NIELEGTFDQIK ASAMV ++IV +S A P +NP G+ G SNFKT
Sbjct: 204 DNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNA-PPAKNPGRGSHAGGPGSNFKT 262
Query: 183 KLCENFTKGQCTFGDRCHFAHGAEELRR 100
KLCENF KG CTFGDRCHFAHG ELR+
Sbjct: 263 KLCENFNKGSCTFGDRCHFAHGESELRK 290
>sp|Q7XPK1|C3H31_ORYSJ Zinc finger CCCH domain-containing protein 31 OS=Oryza
sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1
Length = 309
Score = 70 bits (169), Expect = 3e-012
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2
Query: 216 GASQGSSNFKTKLCENFTKGQCTFGDRCHFAHGAEELRRG 97
G G SN+KTKLCENF KG CTFGDRCHFAHG E R+G
Sbjct: 268 GGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENEQRKG 307
Score = 49 bits (114), Expect = 7e-006
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2
Query: 357 EHESDPKLRNIELEGTFDQIKDASAMVQDIIVNVS 253
+HESD L+NIELEG FDQIK AS MV ++I +S
Sbjct: 213 DHESDSNLKNIELEGNFDQIKQASNMVGELIATIS 247
>sp|Q84UQ3|C3H56_ORYSJ Zinc finger CCCH domain-containing protein 56 OS=Oryza
sativa subsp. japonica GN=Os08g0159800 PE=2 SV=1
Length = 367
Score = 48 bits (113), Expect = 9e-006
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -2
Query: 261 NVSSAAGPHMRNPSMGASQGSSNFKTKLCENF-TKGQCTFGDRCHFAHGAEELRRGG 94
+ ++AA G Q SN+KT++C + G C FG +CHFAHGA EL + G
Sbjct: 223 SAAAAAASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYG 279
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,147,680,677
Number of Sequences: 462764
Number of Extensions: 17147680677
Number of Successful Extensions: 155595402
Number of sequences better than 0.0: 0
|