BLASTX 7.6.2
Query= RU13656 /QuerySize=891
(890 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsi... 182 3e-045
sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF O... 62 6e-009
sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylati... 51 8e-006
>sp|O81488|Y5621_ARATH PHD finger protein At5g26210 OS=Arabidopsis thaliana
GN=At5g26210 PE=1 SV=2
Length = 255
Score = 182 bits (461), Expect = 3e-045
Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
Frame = -1
Query: 857 SPRSVEEIFRDYSARRSGIVRALTNDVDEFYALCDPEKENLCLYGHPDESWXXXXXXXXX 678
+PR+VEE+FRD+ RR+G+++ALT DV EF+ LCDPEKENLCLYGHP+E W
Sbjct: 8 NPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEV 67
Query: 677 XXXXXXXXXGINFARDGMNRQDWLSLIAVHSDSWLLSVSFYFGAR--LNRNERKRLFSLT 504
GINFARDGM +DWLSL+AVHSD+WLL+V+F+FGAR ++ +RKRLF++
Sbjct: 68 PPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMV 127
Query: 503 NDLPTVFEVVTG--RKPARDKPSADSGSKSRNNAKRSTDGPMRTNSTLLDENYVEDEDE 333
NDLPT+FEVV G +K +DK S + S +R+ + R + + E+E+E
Sbjct: 128 NDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDEEEEE 186
Score = 114 bits (284), Expect = 1e-024
Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Frame = -1
Query: 476 VTGRKPARDKPSADSGSKSRNNAKRSTDGPMRTNSTLLDENYVEDEDEHSETLCGSCGGN 297
V+ R K S+ GS+SR AK S P + EDEDE ET CG+CG +
Sbjct: 151 VSNNSSNRSKSSSKRGSESR--AKFSKPEPKDDEEEEEEGVEEEDEDEQGETQCGACGES 208
Query: 296 YSANEFWIGCDICERWYHGKCVKITPSKAEYIQQYKCPSC.KK 168
Y+A+EFWI CD+CE W+HGKCVKITP++AE+I+QYKCPSC K
Sbjct: 209 YAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 251
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens
GN=BPTF PE=1 SV=3
Length = 3046
Score = 62 bits (148), Expect = 6e-009
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -1
Query: 308 CGGNYSANEFWIGCDICERWYHGKCVKITPSKAEYIQQYKCPSC 177
C Y ++F+IGCD C+ WYHG+CV I S+AE I +Y CP C
Sbjct: 2872 CKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQC 2915
>sp|Q6ZMT4|JHD1D_HUMAN JmjC domain-containing histone demethylation protein 1D
OS=Homo sapiens GN=JHDM1D PE=2 SV=2
Length = 941
Score = 51 bits (121), Expect = 8e-006
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = -1
Query: 308 CGGNYSANEFWIGCDICERWYHGKCVKITPSKAEYIQQYKCPSC 177
C Y N F I CDIC+ W+HG CV + A I Y CP+C
Sbjct: 42 CRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNC 85
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,147,680,677
Number of Sequences: 462764
Number of Extensions: 17147680677
Number of Successful Extensions: 155595402
Number of sequences better than 0.0: 0
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