BLASTX 7.6.2
Query= RU15029 /QuerySize=255
(254 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brass... 133 3e-031
sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabi... 132 4e-031
sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Sol... 119 5e-027
sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1... 114 2e-025
sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabi... 71 2e-012
sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays... 69 4e-012
sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryz... 67 3e-011
sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryz... 67 3e-011
sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza... 66 4e-011
sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN... 64 2e-010
sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycope... 64 2e-010
sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza... 64 2e-010
sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare ... 64 2e-010
sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus... 58 1e-008
sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus... 58 1e-008
sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza... 57 2e-008
sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza... 54 2e-007
sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5... 52 6e-007
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea
GN=STM PE=2 SV=1
Length = 383
Score = 133 bits (333), Expect = 3e-031
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGG 180
LGEDP LDQFMEAYCEML+KYEQE+SKPFKEAM+FL+ +E QFK+L++SS S G GE
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 181 MDRNNNGSSEEEVDVNNSLIDPQA 252
++RNNNGSSEEEVD+NN +DPQA
Sbjct: 236 IERNNNGSSEEEVDMNNEFVDPQA 259
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana
GN=STM PE=1 SV=2
Length = 382
Score = 132 bits (332), Expect = 4e-031
Identities = 63/85 (74%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASD-SGCGEG 177
LGEDP LDQFMEAYCEML+KYEQE+SKPFKEAM+FL+++E QFK+L++SS S SG GE
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 178 GMDRNNNGSSEEEVDVNNSLIDPQA 252
+DRNNNGSSEEEVD+NN +DPQA
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVDPQA 258
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum
lycopersicum GN=LET6 PE=2 SV=1
Length = 355
Score = 119 bits (297), Expect = 5e-027
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTV--SSASDSGCGE 174
+GEDPALDQFMEAYCEML KYEQE+SKPFKEAM+FL +IE QFK LT+ +S+ +S GE
Sbjct: 151 IGEDPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGE 210
Query: 175 GGMDRNNNGSSEEEVDVNNSLIDPQA 252
MDR NGSS+EEVDVNNS IDPQA
Sbjct: 211 -AMDR--NGSSDEEVDVNNSFIDPQA 233
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 114 bits (283), Expect = 2e-025
Identities = 60/84 (71%), Positives = 70/84 (83%), Gaps = 5/84 (5%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGG 180
+GEDPALDQFMEAYCEML KYEQE+SKP KEAMLFL++IE QFK LT+SS SD EGG
Sbjct: 179 IGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISS-SDFASNEGG 237
Query: 181 MDRNNNGSSEEEVDVNNSLIDPQA 252
+ NGSSEE+VD++N +IDPQA
Sbjct: 238 ---DRNGSSEEDVDLHN-MIDPQA 257
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana
GN=KNAT1 PE=1 SV=1
Length = 398
Score = 71 bits (172), Expect = 2e-012
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGGMDR 189
DP LDQFMEAYC+ML+KY +E+++P +EAM F+++IESQ L S +G D
Sbjct: 191 DPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSD- 249
Query: 190 NNNGSSEEEVDVNN 231
N GSS+EE + N+
Sbjct: 250 -NMGSSDEEQENNS 262
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2
SV=1
Length = 351
Score = 69 bits (168), Expect = 4e-012
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDS---GCGEGG 180
DP LDQFMEAYC ML+KY +E+++P EAM FLK++E+Q ++ S S +G
Sbjct: 142 DPELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGK 201
Query: 181 MDRNNNGSSEEEVDVNNSLIDP 246
+ GSSE+++D N DP
Sbjct: 202 SE--GVGSSEDDMDPNGRENDP 221
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp.
indica GN=OSH15 PE=2 SV=2
Length = 355
Score = 67 bits (161), Expect = 3e-011
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGGM-- 183
DP LDQFMEAYC ML KY +E+++P EAM FLK++ESQ T+ A G G +
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTI-AGGAHGGGAGSARLLL 201
Query: 184 -DRNNN--GSSEEEVD 222
D + GSSE+++D
Sbjct: 202 ADGKSECVGSSEDDMD 217
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp.
japonica GN=OSH15 PE=2 SV=1
Length = 355
Score = 67 bits (161), Expect = 3e-011
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGGM-- 183
DP LDQFMEAYC ML KY +E+++P EAM FLK++ESQ T+ A G G +
Sbjct: 143 DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTI-AGGAHGGGAGSARLLL 201
Query: 184 -DRNNN--GSSEEEVD 222
D + GSSE+++D
Sbjct: 202 ADGKSECVGSSEDDMD 217
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp.
japonica GN=OSH1 PE=2 SV=2
Length = 361
Score = 66 bits (160), Expect = 4e-011
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSAS-----DSGCGE 174
+P LDQFMEAY EML+KY +E+++P +EAM FL+++E+Q TL++S S SG E
Sbjct: 160 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSSGSSE 219
Query: 175 GGMDRNNNGSSEEEVDVN 228
+ + + E+D +
Sbjct: 220 EDQEGSGGETELPEIDAH 237
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 64 bits (154), Expect = 2e-010
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSAS-----DSGCGE 174
+P LDQFMEAY EML+K+ +E+++P +EAM F++++ESQ +L++S S SG E
Sbjct: 160 EPELDQFMEAYHEMLVKFREELTRPLQEAMEFMRRVESQLNSLSISGRSLRNILSSGSSE 219
Query: 175 GGMDRNNNGSSEEEVDVN 228
+ + + EVD +
Sbjct: 220 EDQEGSGGETELPEVDAH 237
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1
PE=2 SV=1
Length = 355
Score = 64 bits (154), Expect = 2e-010
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTL-----TVSSASD-- 159
+ +DP LDQFMEAY +ML+KY +E+++P +EAM F++KIE+Q L + ++ D
Sbjct: 147 VSKDPELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGNAPVRIFNSEDKC 206
Query: 160 SGCGEGGMDRNNNGSSEE--EVD 222
G G D++N+G E E+D
Sbjct: 207 EGVGSSEEDQDNSGGETELPEID 229
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp.
japonica GN=OSH6 PE=2 SV=1
Length = 301
Score = 64 bits (153), Expect = 2e-010
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 1 LGEDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGG 180
+G DP LD+FMEAYC +L++Y++E+S+PF EA FL I++Q L + S
Sbjct: 95 IGVDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATH 154
Query: 181 MDRNNNGSSEEEVDVNNSLID 243
D S E++ ++D
Sbjct: 155 SDEMVGSSDEDQCSGETDMLD 175
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1
SV=1
Length = 364
Score = 64 bits (153), Expect = 2e-010
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSAS-----DSGCGE 174
+P LDQFMEAY EML+KY +E+++P +EAM FL+++E+Q +L++S S +G E
Sbjct: 164 EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSTGSSE 223
Query: 175 GGMDRNNNGSSEEEVDVN 228
+ + + E+D +
Sbjct: 224 EDQEGSGGETELPEIDAH 241
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2
SV=1
Length = 398
Score = 58 bits (138), Expect = 1e-008
Identities = 24/44 (54%), Positives = 36/44 (81%)
Frame = +1
Query: 7 EDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTL 138
+DP LDQFMEAY +ML+KY +E+++P +EAM F+++IE+Q L
Sbjct: 188 KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNML 231
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2
SV=1
Length = 397
Score = 58 bits (138), Expect = 1e-008
Identities = 24/44 (54%), Positives = 36/44 (81%)
Frame = +1
Query: 7 EDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTL 138
+DP LDQFMEAY +ML+KY +E+++P +EAM F+++IE+Q L
Sbjct: 187 KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNML 230
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp.
japonica GN=OSH3 PE=2 SV=1
Length = 365
Score = 57 bits (136), Expect = 2e-008
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Frame = +1
Query: 7 EDPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTL-------TVSSASDSG 165
EDP LDQFME YC++L++ ++E+S+P +EA FL+ +ES+ ++ + S S +G
Sbjct: 131 EDPELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPPLTALISESKAG 190
Query: 166 CGEGGMDRNNNGSSEEEVD 222
D + +GS E ++
Sbjct: 191 LDSSDDDEHEDGSGMEMME 209
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp.
japonica GN=OSH43 PE=2 SV=1
Length = 341
Score = 54 bits (128), Expect = 2e-007
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 7 EDP-ALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGEGGM 183
+DP LDQFM+AYC ML +Y +E+ +P EA F ++E+Q +L S+ +G E
Sbjct: 142 DDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLAESNCEGTGSSEEEQ 201
Query: 184 D 186
D
Sbjct: 202 D 202
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza
sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 52 bits (124), Expect = 6e-007
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 10 DPALDQFMEAYCEMLIKYEQEVSKPFKEAMLFLKKIESQFKTLTVSSASDSGCGE---GG 180
DP LDQFME YC ML +Y QE+++P +EA F + IE Q +L + + GG
Sbjct: 130 DPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLALDEDVSYDYEDEVAGG 189
Query: 181 MDRNNNGSSEEEV 219
+ + E EV
Sbjct: 190 LPEKSAAFGENEV 202
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,495,485,960
Number of Sequences: 462764
Number of Extensions: 17495485960
Number of Successful Extensions: 162102081
Number of sequences better than 0.0: 0
|