BLASTX 7.6.2
Query= RU16312 /QuerySize=471
(470 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8S1Z1|UTP11_ORYSJ Probable U3 small nucleolar RNA-associated... 140 5e-033
sp|Q9M223|UTP11_ARATH Probable U3 small nucleolar RNA-associated... 131 3e-030
sp|Q55C50|UTP11_DICDI Probable U3 small nucleolar RNA-associated... 93 7e-019
sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein ... 86 8e-017
sp|Q9CZJ1|UTP11_MOUSE Probable U3 small nucleolar RNA-associated... 83 5e-016
sp|Q10106|UTP11_SCHPO Probable U3 small nucleolar RNA-associated... 83 7e-016
sp|Q9Y3A2|UTP11_HUMAN Probable U3 small nucleolar RNA-associated... 80 3e-015
sp|Q8R5K5|UTP11_RAT Probable U3 small nucleolar RNA-associated p... 79 1e-014
sp|Q9W3C0|UTP11_DROME Probable U3 small nucleolar RNA-associated... 78 2e-014
sp|Q09462|UTP11_CAEEL Probable U3 small nucleolar RNA-associated... 75 1e-013
sp|Q9U178|UTP11_LEIMA Probable U3 small nucleolar RNA-associated... 63 6e-010
sp|Q8I4V5|UTP11_PLAF7 Probable U3 small nucleolar RNA-associated... 63 7e-010
>sp|Q8S1Z1|UTP11_ORYSJ Probable U3 small nucleolar RNA-associated protein 11
OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2
Length = 229
Score = 140 bits (351), Expect = 5e-033
Identities = 63/85 (74%), Positives = 77/85 (90%)
Frame = +3
Query: 216 MSSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNP 395
MSSLRNA+ RRAHKER+QPESRKKFG LEKHKDY+ RAK +H+KEET++ LK+KA FRNP
Sbjct: 1 MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60
Query: 396 DEFYFKMINTRTVDGVHKIEGQANK 470
DEFYFKMIN++TVDG+H+ + +ANK
Sbjct: 61 DEFYFKMINSKTVDGIHRPKPEANK 85
>sp|Q9M223|UTP11_ARATH Probable U3 small nucleolar RNA-associated protein 11
OS=Arabidopsis thaliana GN=At3g60360 PE=2 SV=1
Length = 228
Score = 131 bits (327), Expect = 3e-030
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +3
Query: 216 MSSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNP 395
MSSLRNA+ R AHKERSQPE+RK+FG LEKHKDY+ RA YHKK+ETL+IL+QKA F+NP
Sbjct: 1 MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60
Query: 396 DEFYFKMINTRTVDGVHKIEGQANK 470
DEF FKMIN++TVDG H+ + + NK
Sbjct: 61 DEFNFKMINSKTVDGRHRPKDEVNK 85
>sp|Q55C50|UTP11_DICDI Probable U3 small nucleolar RNA-associated protein 11
OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1
Length = 250
Score = 93 bits (229), Expect = 7e-019
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +3
Query: 222 SLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNPDE 401
+LR + +RA +ER QPES KK GFLE+ KDYV+RAK Y+ K +TL+ LK +A F+NPDE
Sbjct: 5 NLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDE 64
Query: 402 FYFKMINTRTVDGVH 446
F +KMI+++ VDGVH
Sbjct: 65 FNYKMISSKLVDGVH 79
>sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein 11
OS=Saccharomyces cerevisiae GN=UTP11 PE=1 SV=1
Length = 256
Score = 86 bits (211), Expect = 8e-017
Identities = 37/72 (51%), Positives = 57/72 (79%)
Frame = +3
Query: 216 MSSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNP 395
M+ L + V ++ H+ERSQ SR ++GFLEKHKDYV+RA+ +H+K+ TL++L++KA+ RNP
Sbjct: 1 MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60
Query: 396 DEFYFKMINTRT 431
DE+Y M + +T
Sbjct: 61 DEYYHAMHSRKT 72
>sp|Q9CZJ1|UTP11_MOUSE Probable U3 small nucleolar RNA-associated protein 11
OS=Mus musculus GN=Utp11l PE=2 SV=1
Length = 253
Score = 83 bits (204), Expect = 5e-016
Identities = 38/68 (55%), Positives = 49/68 (72%)
Frame = +3
Query: 243 RRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNPDEFYFKMIN 422
+R H+ERSQP RK+ G LEK KDY RA YHKK++ L+ L++KA +NPDEFY+KM
Sbjct: 13 QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72
Query: 423 TRTVDGVH 446
+ DGVH
Sbjct: 73 AKLQDGVH 80
>sp|Q10106|UTP11_SCHPO Probable U3 small nucleolar RNA-associated protein 11
OS=Schizosaccharomyces pombe GN=SPAC18G6.06 PE=2 SV=1
Length = 249
Score = 83 bits (203), Expect = 7e-016
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = +3
Query: 219 SSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNPD 398
SS +NA R+ H+ER+QP R+K+G LEK KDY QRA+ Y K++ L+ L++KA RNPD
Sbjct: 3 SSFKNAGQRKNHRERAQPFERRKWGLLEKRKDYAQRAQDYKTKQKKLKRLREKALERNPD 62
Query: 399 EFYFKMINTRTVDGV 443
EFY +M + +T +GV
Sbjct: 63 EFYHEMTHKKTKNGV 77
>sp|Q9Y3A2|UTP11_HUMAN Probable U3 small nucleolar RNA-associated protein 11
OS=Homo sapiens GN=UTP11L PE=1 SV=2
Length = 253
Score = 80 bits (197), Expect = 3e-015
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = +3
Query: 243 RRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNPDEFYFKMIN 422
+R H+ERSQP RK G LEK KDY RA Y KK+E L+ L++KA +NPDEFY+KM
Sbjct: 13 QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72
Query: 423 TRTVDGVHKIE 455
+ DGVH I+
Sbjct: 73 VKLQDGVHIIK 83
>sp|Q8R5K5|UTP11_RAT Probable U3 small nucleolar RNA-associated protein 11
OS=Rattus norvegicus GN=Utp11l PE=2 SV=1
Length = 253
Score = 79 bits (193), Expect = 1e-014
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +3
Query: 219 SSLRNAVS--RRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRN 392
++ R AV +R ++ERSQP RK G LEK KDY RA Y KK+E L+ L++KA +N
Sbjct: 3 AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62
Query: 393 PDEFYFKMINTRTVDGVHKIE 455
PDEFY+KM + DGVH I+
Sbjct: 63 PDEFYYKMTRVKLQDGVHIIK 83
>sp|Q9W3C0|UTP11_DROME Probable U3 small nucleolar RNA-associated protein 11
OS=Drosophila melanogaster GN=CG1789 PE=2 SV=1
Length = 237
Score = 78 bits (190), Expect = 2e-014
Identities = 39/79 (49%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +3
Query: 216 MSSLRNA--VSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFR 389
MSS +NA +++ H+ER QPESR+ GFLEK KDY +RA KK++TL++L ++A+ +
Sbjct: 1 MSSWKNASKSNQKVHRERHQPESRQHLGFLEKKKDYKKRAIDAQKKQKTLKLLYRRAQNK 60
Query: 390 NPDEFYFKMINTRTVDGVH 446
NPDEFY MIN++ + H
Sbjct: 61 NPDEFYHHMINSKLSNDEH 79
>sp|Q09462|UTP11_CAEEL Probable U3 small nucleolar RNA-associated protein 11
OS=Caenorhabditis elegans GN=C16C10.2 PE=2 SV=1
Length = 262
Score = 75 bits (183), Expect = 1e-013
Identities = 38/82 (46%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 207 LSNMSSLRNAVS-RRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKAR 383
+S++ S+ +S +R H+ERSQPE+R+K+G LEK KDY RA+ Y KK +T++ LK+ A
Sbjct: 1 MSSLVSISKKLSGQRQHRERSQPEARRKYGELEKKKDYKLRAEDYQKKRDTIKKLKKSAM 60
Query: 384 FRNPDEFYFKMINTRT-VDGVH 446
+N DE++ M+N+ T DG H
Sbjct: 61 DKNQDEYHHHMVNSETWADGRH 82
>sp|Q9U178|UTP11_LEIMA Probable U3 small nucleolar RNA-associated protein 11
OS=Leishmania major GN=LmjF19.0670 PE=3 SV=1
Length = 361
Score = 63 bits (152), Expect = 6e-010
Identities = 34/66 (51%), Positives = 41/66 (62%)
Frame = +3
Query: 219 SSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNPD 398
S L + R+ H ERSQP+SR+ G LEKHKD+V RAK K LQ +K+ A RNPD
Sbjct: 12 SGLDKHLKRKTHLERSQPKSRQHLGQLEKHKDHVLRAKKRKVKVRRLQEIKRAAAQRNPD 71
Query: 399 EFYFKM 416
EF M
Sbjct: 72 EFNIGM 77
>sp|Q8I4V5|UTP11_PLAF7 Probable U3 small nucleolar RNA-associated protein 11
OS=Plasmodium falciparum (isolate 3D7) GN=PFL2295w PE=3 SV=1
Length = 212
Score = 63 bits (151), Expect = 7e-010
Identities = 28/74 (37%), Positives = 47/74 (63%)
Frame = +3
Query: 216 MSSLRNAVSRRAHKERSQPESRKKFGFLEKHKDYVQRAKVYHKKEETLQILKQKARFRNP 395
MS+ +N + +R + ER Q + R G LEK DY +R ++Y KK++ +LK+K +NP
Sbjct: 1 MSNFKNIIPKRTYLERGQAKHRLHLGELEKKVDYGKRREIYKKKKKIENVLKEKIMTKNP 60
Query: 396 DEFYFKMINTRTVD 437
DEF+ M+++R +
Sbjct: 61 DEFHTGMVHSRVTE 74
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,192,346,547
Number of Sequences: 462764
Number of Extensions: 18192346547
Number of Successful Extensions: 175456667
Number of sequences better than 0.0: 0
|