BLASTX 7.6.2
Query= RU17037 /QuerySize=855
(854 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M4U5|HDT2_MAIZE Histone deacetylase HDT2 OS=Zea mays GN=HDT... 87 2e-016
sp|Q9M4U4|HDT3_MAIZE Histone deacetylase HDT3 OS=Zea mays GN=HDT... 81 6e-015
sp|O24591|HDT1_MAIZE Histone deacetylase HDT1 OS=Zea mays GN=HDT... 78 5e-014
sp|Q8LJS2|HDT1_SOYBN Histone deacetylase HDT1 OS=Glycine max GN=... 75 6e-013
sp|Q9LZR5|HDT3_ARATH Histone deacetylase HDT3 OS=Arabidopsis tha... 71 7e-012
sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis tha... 67 1e-010
sp|Q6V9I6|HDT1_SOLCH Histone deacetylase HDT1 OS=Solanum chacoen... 65 4e-010
>sp|Q9M4U5|HDT2_MAIZE Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1
Length = 303
Score = 87 bits (213), Expect = 2e-016
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +2
Query: 290 TPTPKKPESKKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGG-HTDTPHPAKKGKTPA 466
TPTPKKPE+ K+ ++KTP+S KKAK+ T QKT GKKG H TPHPA KGKTPA
Sbjct: 203 TPTPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPA-KGKTPA 261
Query: 467 TDKSKTQTPKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 589
+ T+ + ALQ+H+KAKH A
Sbjct: 262 NNDKLTEKSPKSGGSVPCKSCSKTFNSEMALQAHSKAKHGA 302
>sp|Q9M4U4|HDT3_MAIZE Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 SV=1
Length = 300
Score = 81 bits (199), Expect = 6e-015
Identities = 50/102 (49%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +2
Query: 290 TPTPKKPE-SKKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGG--HTDTPHPAKKGKT 460
TPTPKKPE KKRA S +KTP+S KKAK+ T + QKT GKKG H TPHPA KGKT
Sbjct: 197 TPTPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPA-KGKT 255
Query: 461 PATDKSKTQTPKSA-XXXXXXXXXXXXXXXXXALQSHNKAKH 583
+ ++PKSA A Q+H+KAKH
Sbjct: 256 IVNNDKSVKSPKSAPKSGVPCKSCSKSFISETAPQAHSKAKH 297
>sp|O24591|HDT1_MAIZE Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1
Length = 307
Score = 78 bits (191), Expect = 5e-014
Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Frame = +2
Query: 290 TPTPKKPE-SKKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGG--HTDTPHPAKKGKT 460
TPTPKKPE KKR S +KTP+S KKAK+ T + QKT GKKG H TPHPA KGKT
Sbjct: 197 TPTPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPA-KGKT 255
Query: 461 PATDKSKTQTPKSAXXXXXX---XXXXXXXXXXXALQSHNKAKHSAGK 595
+ ++PKSA ALQ+H++AK A +
Sbjct: 256 IVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISETALQAHSRAKMGASE 303
>sp|Q8LJS2|HDT1_SOYBN Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1
Length = 295
Score = 75 bits (182), Expect = 6e-013
Identities = 48/98 (48%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Frame = +2
Query: 290 TPTPKKPESKKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGGHTDTPHPAKK-GKTPA 466
TP K + KKR S + KTP+SAKKAK T+TP+KTDGKK H TPHP+KK GKTP
Sbjct: 200 TPAKKVDQGKKRPNES-AAKTPISAKKAK--TATPEKTDGKKSVHVATPHPSKKGGKTP- 255
Query: 467 TDKSKTQTPKSAXXXXXXXXXXXXXXXXXALQSHNKAK 580
+ +K QTP SA LQ H KAK
Sbjct: 256 -NSTKGQTPNSA-GQLSCASCKKSFTNEAGLQQHKKAK 291
>sp|Q9LZR5|HDT3_ARATH Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3
PE=1 SV=2
Length = 294
Score = 71 bits (173), Expect = 7e-012
Identities = 52/107 (48%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Frame = +2
Query: 296 TPKKPES-KKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGG-HTDTPHPAKK------ 451
TPKKPE KKR+ S K P S KKAK V TPQKTD KK H TPHP+K+
Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFV--TPQKTDSKKPHVHVATPHPSKQAGKNSG 247
Query: 452 -GKTPATDKSKTQTPKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 589
G T T K + QTPKSA LQSH KAKHSA
Sbjct: 248 GGSTGETSKQQ-QTPKSA-GAFGCKSCTRTFTSEMGLQSHTKAKHSA 292
>sp|Q56WH4|HDT2_ARATH Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2
PE=1 SV=2
Length = 306
Score = 67 bits (162), Expect = 1e-010
Identities = 46/75 (61%), Positives = 51/75 (68%), Gaps = 11/75 (14%)
Frame = +2
Query: 296 TPKKPE--SKKRAQVSGSVKTPVSAKKAK---IVTSTPQKT-DGKKGGHTDTPHPAKK-G 454
TPKKPE +KKR S S KTPVS KKAK STPQKT + KKGGHT TPHPAKK G
Sbjct: 199 TPKKPEPINKKRPNESVS-KTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGG 257
Query: 455 KTPATDKSKTQTPKS 499
K+P + Q+PKS
Sbjct: 258 KSPV---NANQSPKS 269
>sp|Q6V9I6|HDT1_SOLCH Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2
SV=1
Length = 269
Score = 65 bits (158), Expect = 4e-010
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = +2
Query: 296 TPKKPESKKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKK-GGHTDTPHPAKK-GKTP 463
TPKK E KR + + KTPV+ KKAK+ +TPQKTDGKK GGH TPHP+K+ KTP
Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKL--TTPQKTDGKKGGGHVATPHPSKQASKTP 236
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,157,057,276
Number of Sequences: 462764
Number of Extensions: 20157057276
Number of Successful Extensions: 184850746
Number of sequences better than 0.0: 0
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