BLASTX 7.6.2
Query= RU19973 /QuerySize=248
(247 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q17QI1|TPPC1_BOVIN Trafficking protein particle complex subun... 58 1e-008
sp|Q9Y5R8|TPPC1_HUMAN Trafficking protein particle complex subun... 58 1e-008
sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subun... 58 1e-008
sp|Q2KMM2|TPPC1_RAT Trafficking protein particle complex subunit... 58 1e-008
>sp|Q17QI1|TPPC1_BOVIN Trafficking protein particle complex subunit 1 OS=Bos
taurus GN=TRAPPC1 PE=2 SV=1
Length = 145
Score = 58 bits (139), Expect = 1e-008
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 HMMYVFNRNGVCLLYREWNRPLHT-LNAQQDHKLMFGLLFSLKSLTAKMDP 232
H +Y+F+RNGVCL Y EW+R + ++++KLM+G+LFS++S +KM P
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSP 54
>sp|Q9Y5R8|TPPC1_HUMAN Trafficking protein particle complex subunit 1 OS=Homo
sapiens GN=TRAPPC1 PE=1 SV=1
Length = 145
Score = 58 bits (139), Expect = 1e-008
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 HMMYVFNRNGVCLLYREWNRPLHT-LNAQQDHKLMFGLLFSLKSLTAKMDP 232
H +Y+F+RNGVCL Y EW+R + ++++KLM+G+LFS++S +KM P
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSP 54
>sp|Q5NCF2|TPPC1_MOUSE Trafficking protein particle complex subunit 1 OS=Mus
musculus GN=Trappc1 PE=1 SV=1
Length = 145
Score = 58 bits (139), Expect = 1e-008
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 HMMYVFNRNGVCLLYREWNRPLHT-LNAQQDHKLMFGLLFSLKSLTAKMDP 232
H +Y+F+RNGVCL Y EW+R + ++++KLM+G+LFS++S +KM P
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSP 54
>sp|Q2KMM2|TPPC1_RAT Trafficking protein particle complex subunit 1 OS=Rattus
norvegicus GN=Trappc1 PE=2 SV=1
Length = 145
Score = 58 bits (139), Expect = 1e-008
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 HMMYVFNRNGVCLLYREWNRPLHT-LNAQQDHKLMFGLLFSLKSLTAKMDP 232
H +Y+F+RNGVCL Y EW+R + ++++KLM+G+LFS++S +KM P
Sbjct: 4 HNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSP 54
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,133,449,078
Number of Sequences: 462764
Number of Extensions: 22133449078
Number of Successful Extensions: 193841713
Number of sequences better than 0.0: 0
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