BLASTX 7.6.2
Query= RU20245 /QuerySize=994
(993 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subun... 140 1e-032
sp|O14582|TPPC2_HUMAN Trafficking protein particle complex subun... 140 2e-032
sp|Q9CQP2|TPPC2_MOUSE Trafficking protein particle complex subun... 140 2e-032
sp|Q5RES6|TPPC2_PONAB Trafficking protein particle complex subun... 140 2e-032
sp|Q54RV6|TPPC2_DICDI Trafficking protein particle complex subun... 131 1e-029
sp|P38334|TRS20_YEAST Transport protein particle 20 kDa subunit ... 74 2e-012
>sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2 OS=Bos
taurus GN=TRAPPC2 PE=2 SV=1
Length = 140
Score = 140 bits (352), Expect = 1e-032
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Frame = +3
Query: 219 MATTACFIIVSRNDIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMY 389
M+ + F+IV +D P++E E G A ++D L+QFI HAALD+V + W ++ MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 390 LKAVDRFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSR 569
LK VD+FN+ VSA+VTAGH R ++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 570 ITSSHFDTKVRALARKYL 623
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>sp|O14582|TPPC2_HUMAN Trafficking protein particle complex subunit 2 OS=Homo
sapiens GN=TRAPPC2 PE=1 SV=3
Length = 140
Score = 140 bits (351), Expect = 2e-032
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Frame = +3
Query: 219 MATTACFIIVSRNDIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMY 389
M+ + F+IV +D P++E E G A ++D L+QFI HAALD+V + W ++ MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 390 LKAVDRFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSR 569
LK VD+FN+ VSA+VTAGH R ++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 570 ITSSHFDTKVRALARKYL 623
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>sp|Q9CQP2|TPPC2_MOUSE Trafficking protein particle complex subunit 2 OS=Mus
musculus GN=Trappc2 PE=1 SV=1
Length = 140
Score = 140 bits (351), Expect = 2e-032
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Frame = +3
Query: 219 MATTACFIIVSRNDIPIYEAEV---GSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMY 389
M+ + F+IV +D P++E E G A ++D L+QFI HAALD+V + W ++ MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 390 LKAVDRFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSR 569
LK VD+FN+ VSA+VTAGH R ++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSP 120
Query: 570 ITSSHFDTKVRALARKYL 623
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>sp|Q5RES6|TPPC2_PONAB Trafficking protein particle complex subunit 2 OS=Pongo
abelii GN=TRAPPC2 PE=2 SV=1
Length = 140
Score = 140 bits (351), Expect = 2e-032
Identities = 69/138 (50%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
Frame = +3
Query: 219 MATTACFIIVSRNDIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMY 389
M+ + F+IV +D P++E E G A ++D L+QFI HAALD+V + W ++ MY
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 390 LKAVDRFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSR 569
LK VD+FN+ VSA+VTAGH R ++LHD R +DGIK+FF +V++LYIK +NP Y P S
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP 120
Query: 570 ITSSHFDTKVRALARKYL 623
I SS FD KV+ L +K+L
Sbjct: 121 IRSSAFDRKVQFLGKKHL 138
>sp|Q54RV6|TPPC2_DICDI Trafficking protein particle complex subunit 2
OS=Dictyostelium discoideum GN=trappc2 PE=3 SV=1
Length = 133
Score = 131 bits (327), Expect = 1e-029
Identities = 60/132 (45%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Frame = +3
Query: 225 TTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKAVD 404
+T F+I+ +ND P+YE E ++++ L Q+I H +LDIV++ W ++ MYLK +D
Sbjct: 2 STFTFLIIGKNDNPLYEIEFPITVQKKETYVL-QYIAHGSLDIVEEHVWKSNNMYLKIID 60
Query: 405 RFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSRITSSH 584
+FN + +S++VTAGH + +LLH+ +++D IK+FF EVH+LY+K LLNP Y ITS+
Sbjct: 61 KFNKVQISSFVTAGHIKFLLLHEKKDEDAIKNFFVEVHDLYLKILLNPFYEYNKPITSTA 120
Query: 585 FDTKVRALARKY 620
FD KVR + KY
Sbjct: 121 FDAKVRKIGTKY 132
>sp|P38334|TRS20_YEAST Transport protein particle 20 kDa subunit
OS=Saccharomyces cerevisiae GN=TRS20 PE=1 SV=1
Length = 175
Score = 74 bits (179), Expect = 2e-012
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Frame = +3
Query: 375 TSAMYLKAVDRFNDLVVSAYVTAGHTRLMLLHDSR-------NDDGIKSFFQEVHELYIK 533
T YL VD F L ++AY++ + +++H + +D+ ++SF+QEVHELY+K
Sbjct: 84 TDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVK 143
Query: 534 TLLNPTYLPGSRITSSHFDTKVRALARKYL 623
TL+NP Y I S FD++VR LARK+L
Sbjct: 144 TLMNPFYKITDPIRSPAFDSRVRTLARKHL 173
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,133,449,078
Number of Sequences: 462764
Number of Extensions: 22133449078
Number of Successful Extensions: 193841713
Number of sequences better than 0.0: 0
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