BLASTX 7.6.2
Query= RU20411 /QuerySize=520
(519 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bo... 90 7e-018
sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein OS=Ga... 90 7e-018
sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Ho... 86 8e-017
sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Po... 86 8e-017
sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Ratt... 86 8e-017
sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mu... 79 1e-014
sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 74 3e-013
sp|P53849|GIS2_YEAST Zinc finger protein GIS2 OS=Saccharomyces c... 56 9e-008
>sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bos taurus
GN=CNBP PE=2 SV=1
Length = 170
Score = 90 bits (221), Expect = 7e-018
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 27/174 (15%)
Frame = +2
Query: 29 CHNCGLPGHIASECTT---KSLCWNCREPGHMASNCPNEGICHTCGKAGHRARDCTAAPM 199
C CG GH A EC T + R G + IC+ CG++GH A+DC
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC----- 60
Query: 200 PPGDLR--LCNNCYKQGHIAVDC-----TNEKACNNCRKTGHLARDC--PNEPICNMCNV 352
DL+ C NC + GHIA DC E+ C NC K GHLARDC +E C C
Sbjct: 61 ---DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGE 117
Query: 353 SGHVARQCPRANVLAEXXXXXXXXXXXXXXXXXXYNRDIVCRNCQQLGHMSRDC 514
GH+ + C + ++ C C + GH++R+C
Sbjct: 118 FGHIQKDCTKVKC-------YRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
>sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein OS=Gallus gallus
GN=CNBP PE=2 SV=1
Length = 172
Score = 90 bits (221), Expect = 7e-018
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Frame = +2
Query: 29 CHNCGLPGHIASECTTK-SLCWNCREPGH-----MASNCPNEGICHTCGKAGHRARDCTA 190
C CG GH A EC T R G M+S+ P+ IC+ CG++GH A+DC
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPD--ICYRCGESGHLAKDCDL 63
Query: 191 APMPPGDLRLCNNCYKQGHIAVDC-----TNEKACNNCRKTGHLARDC--PNEPICNMCN 349
+ + C NC + GHIA DC E+ C NC K GHLARDC +E C C
Sbjct: 64 Q-----EDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCG 118
Query: 350 VSGHVARQCPRANVLAEXXXXXXXXXXXXXXXXXXYNRDIVCRNCQQLGHMSRDC 514
GH+ + C + ++ C C + GH++R+C
Sbjct: 119 EFGHIQKDCTKVKC-------YRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166
>sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Homo sapiens
GN=CNBP PE=1 SV=1
Length = 177
Score = 86 bits (212), Expect = 8e-017
Identities = 57/183 (31%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Frame = +2
Query: 29 CHNCGLPGHIASECTT---KSLCWNCREPG---------HMASNCPNEGICHTCGKAGHR 172
C CG GH A EC T + R G ++S+ P+ IC+ CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPD--ICYRCGESGHL 63
Query: 173 ARDCTAAPMPPGDLR--LCNNCYKQGHIAVDC-----TNEKACNNCRKTGHLARDC--PN 325
A+DC DL+ C NC + GHIA DC E+ C NC K GHLARDC +
Sbjct: 64 AKDC--------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Query: 326 EPICNMCNVSGHVARQCPRANVLAEXXXXXXXXXXXXXXXXXXYNRDIVCRNCQQLGHMS 505
E C C GH+ + C + ++ C C + GH++
Sbjct: 116 EQKCYSCGEFGHIQKDCTKVKC-------YRCGETGHVAINCSKTSEVNCYRCGESGHLA 168
Query: 506 RDC 514
R+C
Sbjct: 169 REC 171
>sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Pongo abelii
GN=CNBP PE=2 SV=1
Length = 177
Score = 86 bits (212), Expect = 8e-017
Identities = 57/183 (31%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Frame = +2
Query: 29 CHNCGLPGHIASECTT---KSLCWNCREPG---------HMASNCPNEGICHTCGKAGHR 172
C CG GH A EC T + R G ++S+ P+ IC+ CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPD--ICYRCGESGHL 63
Query: 173 ARDCTAAPMPPGDLR--LCNNCYKQGHIAVDC-----TNEKACNNCRKTGHLARDC--PN 325
A+DC DL+ C NC + GHIA DC E+ C NC K GHLARDC +
Sbjct: 64 AKDC--------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Query: 326 EPICNMCNVSGHVARQCPRANVLAEXXXXXXXXXXXXXXXXXXYNRDIVCRNCQQLGHMS 505
E C C GH+ + C + ++ C C + GH++
Sbjct: 116 EQKCYSCGEFGHIQKDCTKVKC-------YRCGETGHVAINCSKTSEVNCYRCGESGHLA 168
Query: 506 RDC 514
R+C
Sbjct: 169 REC 171
>sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Rattus norvegicus
GN=Cnbp PE=2 SV=1
Length = 177
Score = 86 bits (212), Expect = 8e-017
Identities = 57/183 (31%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Frame = +2
Query: 29 CHNCGLPGHIASECTT---KSLCWNCREPG---------HMASNCPNEGICHTCGKAGHR 172
C CG GH A EC T + R G ++S+ P+ IC+ CG++GH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPD--ICYRCGESGHL 63
Query: 173 ARDCTAAPMPPGDLR--LCNNCYKQGHIAVDC-----TNEKACNNCRKTGHLARDC--PN 325
A+DC DL+ C NC + GHIA DC E+ C NC K GHLARDC +
Sbjct: 64 AKDC--------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 115
Query: 326 EPICNMCNVSGHVARQCPRANVLAEXXXXXXXXXXXXXXXXXXYNRDIVCRNCQQLGHMS 505
E C C GH+ + C + ++ C C + GH++
Sbjct: 116 EQKCYSCGEFGHIQKDCTKVKC-------YRCGETGHVAINCSKTSEVNCYRCGESGHLA 168
Query: 506 RDC 514
R+C
Sbjct: 169 REC 171
>sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mus musculus
GN=Cnbp PE=2 SV=2
Length = 178
Score = 79 bits (193), Expect = 1e-014
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Frame = +2
Query: 113 MASNCPNEGICHTCGKAGHRARDCTAAPMPPGDLRLCNNCYKQGHIAVDC-----TNEKA 277
++S+ P+ IC+ CG++GH A+DC + C NC + GHIA DC E+
Sbjct: 46 VSSSLPD--ICYRCGESGHLAKDCDLQ-----EDEACYNCGRGGHIAKDCKEPKREREQC 98
Query: 278 CNNCRKTGHLARDC--PNEPICNMCNVSGHVARQCPRANVLAEXXXXXXXXXXXXXXXXX 451
C NC K GHLARDC +E C C GH+ + C +
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKC-------YRCGETGHVAINC 151
Query: 452 XYNRDIVCRNCQQLGHMSRDC 514
++ C C + GH++R+C
Sbjct: 152 SKTSEVNCYRCGESGHLAREC 172
>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
OS=Schizosaccharomyces pombe GN=byr3 PE=2 SV=1
Length = 179
Score = 74 bits (181), Expect = 3e-013
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Frame = +2
Query: 143 CHTCGKAGHRARDCTAAPMPPGDLRLCNNCYKQGHIAVDCT---NEKACNNCRKTGHLAR 313
C+ CG+ GH+AR+CT +C NC + GH A +CT EK C C GHL R
Sbjct: 19 CYNCGENGHQARECTKG-------SICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVR 71
Query: 314 DCPNEP------ICNMCNVSGHVARQC 376
DCP+ P C C GH+AR C
Sbjct: 72 DCPSSPNPRQGAECYKCGRVGHIARDC 98
>sp|P53849|GIS2_YEAST Zinc finger protein GIS2 OS=Saccharomyces cerevisiae
GN=GIS2 PE=1 SV=1
Length = 153
Score = 56 bits (134), Expect = 9e-008
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 266 NEKACNNCRKTGHLARDCPNEPICNMCNVSGHVARQCPRANVLAEXXXXXXXXXXXXXXX 445
++KAC C K GHLA DC +E +C CN GHV C + E
Sbjct: 2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTV-EFKQCYNCGETGHVRS 60
Query: 446 XXXYNRDIVCRNCQQLGHMSRDC 514
R C NC Q GH+SR+C
Sbjct: 61 ECTVQR---CFNCNQTGHISREC 80
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,133,449,078
Number of Sequences: 462764
Number of Extensions: 22133449078
Number of Successful Extensions: 193841713
Number of sequences better than 0.0: 0
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