BLASTX 7.6.2
Query= RU20607 /QuerySize=275
(274 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidops... 107 2e-023
sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidops... 88 1e-017
sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sa... 78 9e-015
sp|P97496|SMRC1_MOUSE SWI/SNF complex subunit SMARCC1 OS=Mus mus... 78 9e-015
sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sa... 77 2e-014
sp|Q6PDG5|SMRC2_MOUSE SWI/SNF complex subunit SMARCC2 OS=Mus mus... 77 2e-014
sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2 OS=S... 69 7e-012
sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoid... 66 5e-011
sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex prot... 53 3e-007
sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sati... 50 3e-006
sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidops... 49 5e-006
>sp|Q9XI07|SWI3C_ARATH SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana
GN=SWI3C PE=1 SV=1
Length = 807
Score = 107 bits (266), Expect = 2e-023
Identities = 54/88 (61%), Positives = 68/88 (77%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLEA+E+YNENW +IA+HVG+KSKAQCILHFLRLPVEDGLL+N+EV + + N
Sbjct: 406 QETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTENP 465
Query: 183 SDRDDHGGFYSTSNGNSAGSCLQDGDSE 266
++ DH G + SNG+ G Q D+E
Sbjct: 466 TNGYDHKG--TDSNGDLPGYSEQGSDTE 491
>sp|Q8VY05|SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana
GN=SWI3D PE=1 SV=3
Length = 985
Score = 88 bits (216), Expect = 1e-017
Identities = 40/62 (64%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
QETLLLLEA+EI+ ENWNEIAEHV TK+KAQC+LHFL++P+ED L+ I+ K P+S ++
Sbjct: 370 QETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDY-KDPISKDT 428
Query: 183 SD 188
+D
Sbjct: 429 TD 430
>sp|Q92922|SMRC1_HUMAN SWI/SNF complex subunit SMARCC1 OS=Homo sapiens
GN=SMARCC1 PE=1 SV=3
Length = 1105
Score = 78 bits (191), Expect = 9e-015
Identities = 33/57 (57%), Positives = 48/57 (84%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLS 173
QETLLLLEA+E+Y ++WN+++EHVG++++ +CILHFLRLP+ED LEN + PL+
Sbjct: 626 QETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA 682
>sp|P97496|SMRC1_MOUSE SWI/SNF complex subunit SMARCC1 OS=Mus musculus
GN=Smarcc1 PE=1 SV=2
Length = 1104
Score = 78 bits (191), Expect = 9e-015
Identities = 33/57 (57%), Positives = 48/57 (84%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLS 173
QETLLLLEA+E+Y ++WN+++EHVG++++ +CILHFLRLP+ED LEN + PL+
Sbjct: 625 QETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA 681
>sp|Q8TAQ2|SMRC2_HUMAN SWI/SNF complex subunit SMARCC2 OS=Homo sapiens
GN=SMARCC2 PE=1 SV=1
Length = 1214
Score = 77 bits (189), Expect = 2e-014
Identities = 33/57 (57%), Positives = 48/57 (84%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLS 173
QETLLLLEA+E+Y ++WN+++EHVG++++ +CILHFLRLP+ED LE+ E PL+
Sbjct: 604 QETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA 660
>sp|Q6PDG5|SMRC2_MOUSE SWI/SNF complex subunit SMARCC2 OS=Mus musculus
GN=Smarcc2 PE=1 SV=2
Length = 1213
Score = 77 bits (189), Expect = 2e-014
Identities = 33/57 (57%), Positives = 48/57 (84%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIEVPKMPLS 173
QETLLLLEA+E+Y ++WN+++EHVG++++ +CILHFLRLP+ED LE+ E PL+
Sbjct: 604 QETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA 660
>sp|O14470|SSR2_SCHPO SWI/SNF and RSC complexes subunit ssr2
OS=Schizosaccharomyces pombe GN=ssr2 PE=1 SV=3
Length = 503
Score = 69 bits (166), Expect = 7e-012
Identities = 27/50 (54%), Positives = 42/50 (84%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPVEDGLLENIE 152
QETLLLLEA+E Y ++WN+IA HVG+++K QC++HFL++P+ED + ++
Sbjct: 253 QETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIEDPYRQKLQ 302
>sp|Q54J55|MYBX_DICDI Myb-like protein X OS=Dictyostelium discoideum GN=mybX
PE=3 SV=1
Length = 1620
Score = 66 bits (159), Expect = 5e-011
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +3
Query: 6 ETLLLLEAMEIYNENWNEIAEHV-GTKSKAQCILHFLRLPVEDGLLENIEVPKMPLSSNS 182
ETLLLLE +EI+ +NW EI++++ G+K+ QC+ HF+RLP+ED LE ++ P+ S S
Sbjct: 934 ETLLLLEGIEIFRDNWQEISDYIGGSKTPEQCLTHFIRLPIEDEFLER-KISSFPVGSLS 992
Query: 183 SDRDDHGGFYSTSNG 227
D +S + G
Sbjct: 993 KKEIDSNNPFSITYG 1007
>sp|P43609|RSC8_YEAST Chromatin structure-remodeling complex protein RSC8
OS=Saccharomyces cerevisiae GN=RSC8 PE=1 SV=1
Length = 557
Score = 53 bits (126), Expect = 3e-007
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +3
Query: 3 QETLLLLEAMEIYNENWNEIAEHVGTKSKAQ-CILHFLRLPVEDGLLENIEVPKMPLSSN 179
QE LLLLE +E+Y + W +IA+HVG + + CI FL LP+ED + EV L+
Sbjct: 318 QEMLLLLEGIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIR--EVVGSTLNGK 375
Query: 180 SSDRDDHGGFYSTSNGNSAGSCLQD 254
D D + +G+ C+ D
Sbjct: 376 GGDSRD-----GSVSGSKLMECVND 395
>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp.
japonica GN=ADA2 PE=2 SV=2
Length = 567
Score = 50 bits (118), Expect = 3e-006
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = +3
Query: 6 ETLLLLEAMEIYN-ENWNEIAEHVGTKSKAQCILHF 110
E +LLLE +E+Y NW E+AEHVGTK+KAQCI H+
Sbjct: 115 EEILLLEGIEMYGLGNWAEVAEHVGTKTKAQCIDHY 150
>sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana
GN=ADA2B PE=1 SV=1
Length = 487
Score = 49 bits (116), Expect = 5e-006
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +3
Query: 6 ETLLLLEAMEIYN-ENWNEIAEHVGTKSKAQCILHF 110
+ +LLLE +EIY NW E+AEHVGTKSK QC+ H+
Sbjct: 109 DEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHY 144
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,133,449,078
Number of Sequences: 462764
Number of Extensions: 22133449078
Number of Successful Extensions: 193841713
Number of sequences better than 0.0: 0
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