BLASTX 7.6.2
Query= RU21248 /QuerySize=256
(255 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0JDM0|C3H27_ORYSJ Zinc finger CCCH domain-containing protein... 122 4e-028
sp|Q5T8P6|RBM26_HUMAN RNA-binding protein 26 OS=Homo sapiens GN=... 64 2e-010
sp|Q6NZN0|RBM26_MOUSE RNA-binding protein 26 OS=Mus musculus GN=... 64 2e-010
sp|Q2T9I5|RBM26_XENLA RNA-binding protein 26 OS=Xenopus laevis G... 62 9e-010
sp|Q9P2N5|RBM27_HUMAN RNA-binding protein 27 OS=Homo sapiens GN=... 56 5e-008
sp|Q5SFM8|RBM27_MOUSE RNA-binding protein 27 OS=Mus musculus GN=... 56 5e-008
>sp|Q0JDM0|C3H27_ORYSJ Zinc finger CCCH domain-containing protein 27 OS=Oryza
sativa subsp. japonica GN=Os04g0394300 PE=2 SV=2
Length = 903
Score = 122 bits (306), Expect = 4e-028
Identities = 54/81 (66%), Positives = 68/81 (83%)
Frame = -3
Query: 250 IGLQGTLRPPIHSSLNMGIPRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFN 71
+G+QG ++P I +++G+PRQRCRDFEERGFCLRGD+CPMEHG+NRIVVED+QSLSQFN
Sbjct: 208 LGMQGPIQPAISPLIDLGMPRQRCRDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFN 267
Query: 70 LPVSLPSAHLLGKPTGPGTLP 8
LPV++P+ LG PGT P
Sbjct: 268 LPVTVPNTQGLGIQNEPGTAP 288
>sp|Q5T8P6|RBM26_HUMAN RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1
SV=3
Length = 1007
Score = 64 bits (153), Expect = 2e-010
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 17/78 (21%)
Frame = -3
Query: 232 LRPPIHSSLNMGIPRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFNLPVSLP 53
+RPP +P++RCRD++E+GFC+RGD+CP +HG + +VVEDV NLP LP
Sbjct: 285 VRPP--------MPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGMLP 330
Query: 52 ---SAHLLGKPTGPGTLP 8
++ P PG P
Sbjct: 331 FPAQPPVVEGPPPPGLPP 348
>sp|Q6NZN0|RBM26_MOUSE RNA-binding protein 26 OS=Mus musculus GN=Rbm26 PE=1
SV=2
Length = 1012
Score = 64 bits (153), Expect = 2e-010
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 17/78 (21%)
Frame = -3
Query: 232 LRPPIHSSLNMGIPRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFNLPVSLP 53
+RPP +P++RCRD++E+GFC+RGD+CP +HG + +VVEDV NLP LP
Sbjct: 285 VRPP--------MPKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGMLP 330
Query: 52 ---SAHLLGKPTGPGTLP 8
++ P PG P
Sbjct: 331 FPAQPPVVEGPPPPGLPP 348
>sp|Q2T9I5|RBM26_XENLA RNA-binding protein 26 OS=Xenopus laevis GN=rbm26 PE=2
SV=2
Length = 1059
Score = 62 bits (148), Expect = 9e-010
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 10/74 (13%)
Frame = -3
Query: 217 HSSL-NMGIPRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFNLPVSLP---S 50
HSS + + ++RCRD++E+GFC+RGD+CP +HG + +VVEDV NLP LP
Sbjct: 320 HSSYGRLQMQKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDV------NLPGILPFPAP 373
Query: 49 AHLLGKPTGPGTLP 8
+L P PG P
Sbjct: 374 PPVLEGPPPPGLPP 387
>sp|Q9P2N5|RBM27_HUMAN RNA-binding protein 27 OS=Homo sapiens GN=RBM27 PE=1
SV=2
Length = 1060
Score = 56 bits (133), Expect = 5e-008
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = -3
Query: 193 PRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGKPTGPGT 14
P++RCRD++ERGFC+ GD+C +HG + +VV++V S P P L P PG
Sbjct: 275 PKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPG---LPPPPPPGM 331
Query: 13 L 11
L
Sbjct: 332 L 332
>sp|Q5SFM8|RBM27_MOUSE RNA-binding protein 27 OS=Mus musculus GN=Rbm27 PE=2
SV=2
Length = 1060
Score = 56 bits (133), Expect = 5e-008
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = -3
Query: 193 PRQRCRDFEERGFCLRGDICPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGKPTGPGT 14
P++RCRD++ERGFC+ GD+C +HG + +VV++V S P P L P PG
Sbjct: 275 PKRRCRDYDERGFCVLGDLCQFDHGNDPLVVDEVALPSMIPFPPPPPG---LPPPPPPGM 331
Query: 13 L 11
L
Sbjct: 332 L 332
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,486,143,612
Number of Sequences: 462764
Number of Extensions: 22486143612
Number of Successful Extensions: 200030929
Number of sequences better than 0.0: 0
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