BLASTX 7.6.2
Query= RU22111 /QuerySize=549
(548 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thalia... 204 4e-052
sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thal... 163 7e-040
sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea may... 155 2e-037
sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thalia... 144 3e-034
sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=... 138 3e-032
sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=H... 138 3e-032
sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=H... 137 6e-032
sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDA... 135 2e-031
sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=... 135 2e-031
sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=H... 135 2e-031
sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=H... 135 2e-031
sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=H... 135 2e-031
sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus G... 135 2e-031
sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopu... 134 3e-031
sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopu... 134 5e-031
sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila mel... 132 2e-030
sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotu... 131 2e-030
sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostel... 126 8e-029
sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicali... 125 2e-028
sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=... 124 3e-028
sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN... 124 3e-028
sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=H... 124 4e-028
sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=H... 124 4e-028
sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=H... 124 4e-028
sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus G... 124 4e-028
sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis ele... 120 6e-027
sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigrovi... 119 1e-026
sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hd... 119 2e-026
sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces c... 117 6e-026
sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharom... 116 1e-025
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1
SV=1
Length = 471
Score = 204 bits (517), Expect = 4e-052
Identities = 98/142 (69%), Positives = 106/142 (74%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
ADCLR+LRS+NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEP+NKLPYNEY+EYFGPDY
Sbjct: 294 ADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDY 353
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQXXXXXXXXXXXXXXRMDHR 187
TLHVD MENLN+PK+ME IRNTLLEQLS L HAPSV FQ M+ R
Sbjct: 354 TLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETR 413
Query: 186 PKRRIWEGVXXXXXXXXXXEKP 121
PK RIW G +KP
Sbjct: 414 PKPRIWSGTATYESDSDDDDKP 435
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19
PE=1 SV=2
Length = 501
Score = 163 bits (411), Expect = 7e-040
Identities = 73/101 (72%), Positives = 87/101 (86%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C++++RSFNVPL++LGGGGYTIRNVARCWCYET VA+GVE E+K+P +EYYEYFGPDY
Sbjct: 290 AECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDY 349
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
TLHV NMEN NS + +E IRN LL LS+L HAPSVPFQ
Sbjct: 350 TLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQ 390
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 155 bits (390), Expect = 2e-037
Identities = 70/101 (69%), Positives = 87/101 (86%), Gaps = 4/101 (3%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C+RY+RSFNVPL++LGGGGYTIRNVARCWCYET VA+G EPE+K+P NEYYEYFGPDY
Sbjct: 295 AECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDY 354
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
TLHV NMEN N+ +++++IR+ +LS+L HAPSV FQ
Sbjct: 355 TLHVAPSNMENKNTRQQLDDIRS----KLSKLRHAPSVHFQ 391
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2
SV=1
Length = 409
Score = 144 bits (363), Expect = 3e-034
Identities = 68/124 (54%), Positives = 85/124 (68%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
DCL+Y+RSFNVPLM+LGGGGYT+ NVARCWCYETA+AVG + +N LP N+Y +YF PDY
Sbjct: 286 DCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYK 345
Query: 363 LHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQXXXXXXXXXXXXXXRMDHRP 184
LH+ N +NLN+ ++ +R TLL QLS + HAPSVPFQ M+ R
Sbjct: 346 LHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAEVDMEKRN 405
Query: 183 KRRI 172
RI
Sbjct: 406 DPRI 409
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2
SV=1
Length = 488
Score = 138 bits (345), Expect = 3e-032
Identities = 60/101 (59%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 283 AKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDF 342
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+P+ ME I+ L E L LPHAP V Q
Sbjct: 343 KLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQ 383
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 138 bits (345), Expect = 3e-032
Identities = 60/101 (59%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 283 AKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDF 342
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+P+ ME I+ L E L LPHAP V Q
Sbjct: 343 KLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQ 383
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 137 bits (343), Expect = 6e-032
Identities = 60/101 (59%), Positives = 75/101 (74%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ ++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 283 AKCVEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDF 342
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+P+ ME I+ L E L LPHAP V Q
Sbjct: 343 KLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQ 383
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2
SV=1
Length = 480
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2
SV=1
Length = 482
Score = 135 bits (339), Expect = 2e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis
GN=hdac1-A PE=1 SV=1
Length = 480
Score = 134 bits (337), Expect = 3e-031
Identities = 58/101 (57%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ ++++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFIKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis
GN=hdac1-B PE=1 SV=1
Length = 480
Score = 134 bits (335), Expect = 5e-031
Identities = 57/101 (56%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ ++++FN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+
Sbjct: 282 AKCVEFIKTFNLPMLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDF 341
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + +E I+ L E L LPHAP V Q
Sbjct: 342 KLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQ 382
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster
GN=Rpd3 PE=1 SV=2
Length = 521
Score = 132 bits (330), Expect = 2e-030
Identities = 54/99 (54%), Positives = 75/99 (75%)
Frame = -3
Query: 540 CLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTL 361
C+ +++ +N+P +++GGGGYTIRNV+RCW YET+VA+ VE N+LPYN+Y+EYFGPD+ L
Sbjct: 282 CVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKL 341
Query: 360 HVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
H+ NM N N+ + +E I+N L E L LPHAP V Q
Sbjct: 342 HISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQ 380
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus
GN=HDAC1 PE=2 SV=1
Length = 576
Score = 131 bits (329), Expect = 2e-030
Identities = 53/101 (52%), Positives = 76/101 (75%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +++ +N+PL+++GGGGYTIRNVARCW YET+ A+GVE N+LPYN+Y+EYFGPD+
Sbjct: 281 AKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANELPYNDYFEYFGPDF 340
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
LH+ NM N N+ + ++ I+ L E + +PHAP V Q
Sbjct: 341 KLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQ 381
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum
GN=DDB_G0268024 PE=3 SV=1
Length = 495
Score = 126 bits (316), Expect = 8e-029
Identities = 55/97 (56%), Positives = 74/97 (76%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A C+ +L+SFNVPL+VLGGGGYTI+NVARCW YET++ V E +++LPYN+Y EY+GP+Y
Sbjct: 277 AQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYNDYLEYYGPEY 336
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPS 256
LH+ NMEN N+ +E ++ LLE L L HAP+
Sbjct: 337 RLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPA 373
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2
SV=1
Length = 428
Score = 125 bits (312), Expect = 2e-028
Identities = 55/98 (56%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C++Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2
SV=1
Length = 428
Score = 124 bits (311), Expect = 3e-028
Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2
SV=2
Length = 428
Score = 124 bits (311), Expect = 3e-028
Identities = 55/98 (56%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C++Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTVFESLKMLNHAPSV 375
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 124 bits (310), Expect = 4e-028
Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 124 bits (310), Expect = 4e-028
Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 124 bits (310), Expect = 4e-028
Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1
SV=1
Length = 428
Score = 124 bits (310), Expect = 4e-028
Identities = 55/98 (56%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ Y++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY+EY+EYF PD+T
Sbjct: 278 ECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + ++ IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSV 375
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1
PE=1 SV=1
Length = 461
Score = 120 bits (300), Expect = 6e-027
Identities = 51/97 (52%), Positives = 71/97 (73%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C R+ RS+NVPLM++GGGGYT RNVARCW YET++AV E N+LPYN+Y+EYFGP+Y
Sbjct: 287 ECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYR 346
Query: 363 LHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH+++ N N NS + ++ ++ L +L PSV
Sbjct: 347 LHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSV 383
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3
PE=3 SV=1
Length = 428
Score = 119 bits (297), Expect = 1e-026
Identities = 52/98 (53%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ +++SF +PL+VLGGGGYT+RNVARCW +ET++ + ++LPY+EY+EYF PD+T
Sbjct: 278 ECVEFVKSFKIPLLVLGGGGYTVRNVARCWTFETSLLLEESISDELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + +E IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSV 375
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 119 bits (296), Expect = 2e-026
Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
+C+ +++ F +PL+VLGGGGYT+RNVARCW +ET++ V ++LPY+EY+EYF PD+T
Sbjct: 278 ECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSEYFEYFAPDFT 337
Query: 363 LHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
LH D + +EN NS + +E IR T+ E L L HAPSV
Sbjct: 338 LHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSV 375
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae
GN=RPD3 PE=1 SV=1
Length = 433
Score = 117 bits (291), Expect = 6e-026
Identities = 49/98 (50%), Positives = 69/98 (70%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C+ Y++SF +P+MV+GGGGYT+RNVAR WC+ET + V + LPYNEYYEY+GPDY
Sbjct: 292 ANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDY 351
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSV 253
L V NM N+N+P+ ++ + + L +APSV
Sbjct: 352 KLSVRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSV 389
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe
GN=phd1 PE=1 SV=1
Length = 434
Score = 116 bits (289), Expect = 1e-025
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNE-YYEYFGPDY 367
+C+R+ RSFN+P++V+GGGGYT+RNVAR WCYET++ V + ++LP YYE+F PDY
Sbjct: 301 ECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRETLYYEFFAPDY 360
Query: 366 TLHVD-TCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
TLH T +EN N+PK +E++R LEQL L APSV Q
Sbjct: 361 TLHPRLTTKIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQ 402
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,542,086,135
Number of Sequences: 462764
Number of Extensions: 23542086135
Number of Successful Extensions: 219543700
Number of sequences better than 0.0: 0
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