BLASTX 7.6.2
Query= RU22321 /QuerySize=497
(496 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=... 223 5e-058
sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=... 221 2e-057
sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=... 218 2e-056
sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus muscu... 137 4e-032
sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos tauru... 133 5e-031
sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapi... 133 5e-031
sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyoste... 124 2e-028
sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=... 107 4e-023
sp|Q9ZAE8|ACBB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplane... 86 9e-017
sp|P95780|RMLB_STRMU dTDP-glucose 4,6-dehydratase OS=Streptococc... 83 6e-016
sp|P37761|RFBB_NEIGO dTDP-glucose 4,6-dehydratase OS=Neisseria g... 81 3e-015
sp|Q9S642|RFBB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria m... 81 3e-015
sp|P37777|RFBB_SHIFL dTDP-glucose 4,6-dehydratase OS=Shigella fl... 80 7e-015
sp|P55293|RFBB_ECOLX dTDP-glucose 4,6-dehydratase OS=Escherichia... 79 8e-015
sp|P27830|RFFG_ECOLI dTDP-glucose 4,6-dehydratase OS=Escherichia... 79 1e-014
sp|P55294|RFBB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria m... 78 2e-014
sp|P37759|RFBB_ECOLI dTDP-glucose 4,6-dehydratase OS=Escherichia... 77 6e-014
sp|P39630|SPSJ_BACSU Spore coat polysaccharide biosynthesis prot... 77 6e-014
sp|P35675|YGAE_ERWAM Uncharacterized protein in galE 3'region (F... 73 6e-013
sp|B0RVL0|RFBB_XANCB dTDP-glucose 4,6-dehydratase OS=Xanthomonas... 72 1e-012
sp|P0C7J0|RFBB_XANCP dTDP-glucose 4,6-dehydratase OS=Xanthomonas... 72 2e-012
sp|Q9HDU4|YHEB_SCHPO Uncharacterized protein PB2B2.11 OS=Schizos... 69 1e-011
sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis ... 64 3e-010
sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanoc... 64 5e-010
sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Ar... 59 9e-009
sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Or... 59 9e-009
sp|Q9SUN3|ARAE3_ARATH Putative UDP-arabinose 4-epimerase 3 OS=Ar... 59 9e-009
sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis... 58 2e-008
sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodur... 58 2e-008
sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Or... 57 3e-008
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis
thaliana GN=RHM3 PE=2 SV=1
Length = 664
Score = 223 bits (567), Expect = 5e-058
Identities = 105/118 (88%), Positives = 114/118 (96%)
Frame = +2
Query: 143 YKPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIK 322
YKPKNILITGAAGFIASHV NRL+R+YP+YKIVVLDKLDYCSNLKNL+PS+SS NFKF+K
Sbjct: 4 YKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVK 63
Query: 323 GDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 496
GDI SADLVN++L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT
Sbjct: 64 GDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
>sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis
thaliana GN=RHM2 PE=1 SV=1
Length = 667
Score = 221 bits (561), Expect = 2e-057
Identities = 106/120 (88%), Positives = 113/120 (94%)
Frame = +2
Query: 137 TAYKPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKF 316
T YKPKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCS+LKNL PS SS NFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 317 IKGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 496
+KGDI S DLVN++L+TE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
>sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis
thaliana GN=RHM1 PE=2 SV=1
Length = 669
Score = 218 bits (554), Expect = 2e-056
Identities = 104/119 (87%), Positives = 112/119 (94%)
Frame = +2
Query: 140 AYKPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFI 319
+Y PKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL+PS+ S NFKF+
Sbjct: 3 SYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFV 62
Query: 320 KGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 496
KGDI SADLVN +L+TE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT
Sbjct: 63 KGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds
PE=2 SV=1
Length = 355
Score = 137 bits (343), Expect = 4e-032
Identities = 64/111 (57%), Positives = 81/111 (72%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P + N+KFI+GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
+ V + E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNA 128
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2
SV=1
Length = 355
Score = 133 bits (334), Expect = 5e-031
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL + N+KFI+GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
+ V + TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSA 128
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS
PE=1 SV=1
Length = 350
Score = 133 bits (334), Expect = 5e-031
Identities = 62/111 (55%), Positives = 80/111 (72%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL + N+KFI+GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
+ V + TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSA 128
>sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum
GN=tgds PE=3 SV=1
Length = 434
Score = 124 bits (311), Expect = 2e-028
Identities = 62/113 (54%), Positives = 76/113 (67%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
+ ILITG AGFI SH+ L + + KI+VLDKLDYCSN+ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
++L+ I E ID ++H AA THVDNSF S +FT+NNI GTH LLE CK
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK 122
>sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1
Length = 323
Score = 107 bits (266), Expect = 4e-023
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
KNIL+TG GFI S+ N + Y I V D DYC++++N+ ++ K IKGDI
Sbjct: 2 KNILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCASVENV---EWNNRTKLIKGDI 58
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 493
+ DL+ L IDTI+HFAA +HVDNSF NS FT+ N++GTHVLLE ++
Sbjct: 59 RNFDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRM 112
>sp|Q9ZAE8|ACBB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain
50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 86 bits (211), Expect = 9e-017
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRN-----YPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIK 322
IL+TG AGFI SH LI P ++ V+DKL Y NL+NL + + F F++
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVR 62
Query: 323 GDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
GDI L+ ++ DT+ HFAA+THVD S S F +N+ GT VLL+A
Sbjct: 63 GDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDA 114
>sp|P95780|RMLB_STRMU dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans
GN=rmlB PE=1 SV=2
Length = 348
Score = 83 bits (204), Expect = 6e-016
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + + GDI
Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLE-EILGDRVELVVGDI 63
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
++LV+ L D I+H+AA++H DNS + F N GT++LLEA +
Sbjct: 64 ADSELVD--KLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAAR 114
>sp|P37761|RFBB_NEIGO dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae
GN=rfbB PE=3 SV=1
Length = 346
Score = 81 bits (198), Expect = 3e-015
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
KNIL+TG AGFI S V +I+N + +V LDKL Y NL++L + + F + DI
Sbjct: 7 KNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 65
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
++ + D +MH AA++HVD + G++ EF + NI GT LLEA +
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAAR 118
>sp|Q9S642|RFBB_NEIMA dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis
serogroup A GN=rfbB1 PE=3 SV=1
Length = 341
Score = 81 bits (198), Expect = 3e-015
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
+ IL+TG AGFI S V +IRN + +V LDKL Y NL++L + + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 60
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
++ + D +MH AA++HVD S G++ EF + NI GT LLEA +
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAAR 113
>sp|P37777|RFBB_SHIFL dTDP-glucose 4,6-dehydratase OS=Shigella flexneri GN=rfbB
PE=3 SV=2
Length = 361
Score = 80 bits (195), Expect = 7e-015
Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGS 337
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICD 61
Query: 338 ADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
A ++ I D +MH AA++HVD S F + NI GT+VLLEA +
Sbjct: 62 AVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>sp|P55293|RFBB_ECOLX dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rfbB
PE=3 SV=1
Length = 361
Score = 79 bits (194), Expect = 8e-015
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGS 337
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICD 61
Query: 338 ADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
A+ +D +MH AA++HVD S F + NI GT+VLLEA +
Sbjct: 62 AEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>sp|P27830|RFFG_ECOLI dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain
K12) GN=rffG PE=1 SV=3
Length = 355
Score = 79 bits (193), Expect = 1e-014
Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
+ ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
+ + D +MH AA++HVD S F + NI GT+ LLEA +
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAAR 113
>sp|P55294|RFBB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis
serogroup B GN=rfbB1 PE=3 SV=2
Length = 355
Score = 78 bits (191), Expect = 2e-014
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
+ IL+TG AGFI S V +IRN + +V +DKL Y NL++L + + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
++ + D +MH AA++HVD S G++ EF + NI GT LLEA +
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAAR 113
>sp|P37759|RFBB_ECOLI dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain
K12) GN=rfbB PE=3 SV=2
Length = 361
Score = 77 bits (187), Expect = 6e-014
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGS 337
IL+TG AGFI S V +I N + +V +DKL Y N ++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICD 61
Query: 338 ADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
A + I D +MH AA++HVD S F + NI GT+VLLEA +
Sbjct: 62 APAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>sp|P39630|SPSJ_BACSU Spore coat polysaccharide biosynthesis protein spsJ
OS=Bacillus subtilis GN=spsJ PE=3 SV=1
Length = 315
Score = 77 bits (187), Expect = 6e-014
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +2
Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDI 331
K+ LITG AGFI ++R + +I VLDKL Y S+ + + + +S F+F+KGDI
Sbjct: 3 KSYLITGGAGFIGLTFTKLMLRE-TDARITVLDKLTYASHPEEMEKLKQNSRFRFVKGDI 61
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
+ ++ E+ D ++HFAA++HVD S + F N+ GT+ L EA
Sbjct: 62 SVQEDID-RAFDETYDGVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEA 111
>sp|P35675|YGAE_ERWAM Uncharacterized protein in galE 3'region (Fragment)
OS=Erwinia amylovora PE=3 SV=1
Length = 164
Score = 73 bits (178), Expect = 6e-013
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGS 337
IL+TG AGFI S V +I N + ++ +DKL Y NL++L + F K DI
Sbjct: 3 ILVTGGAGFIGSAVIRHIINNTDD-TVLNIDKLTYAGNLESLQEISDNPRDHFSKTDICD 61
Query: 338 ADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 493
++ + D +MH AA++HVD S F + N+ GT+VLLEA ++
Sbjct: 62 SESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNMIGTYVLLEAARM 113
>sp|B0RVL0|RFBB_XANCB dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=rfbB PE=3 SV=1
Length = 351
Score = 72 bits (175), Expect = 1e-012
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 161 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGSA 340
L+TG AGFI + + ++V LD L Y NL L +++ F+KGDIG
Sbjct: 5 LVTGGAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 341 DLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
LV +L D +++FAA++HVD S F + N+ GT LLEA +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVR 112
>sp|P0C7J0|RFBB_XANCP dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris GN=rfbB PE=3 SV=1
Length = 351
Score = 72 bits (174), Expect = 2e-012
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +2
Query: 161 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGSA 340
L+TG AGFI + + ++V LD L Y NL L +++ F+KGDIG
Sbjct: 5 LVTGRAGFIGGNFVLEAVSR--GIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDG 62
Query: 341 DLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
LV +L D +++FAA++HVD S F + N+ GT LLEA +
Sbjct: 63 ALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVR 112
>sp|Q9HDU4|YHEB_SCHPO Uncharacterized protein PB2B2.11 OS=Schizosaccharomyces
pombe GN=SPBPB2B2.11 PE=2 SV=1
Length = 365
Score = 69 bits (166), Expect = 1e-011
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Frame = +2
Query: 161 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSR--SSSNFKFIKGDIG 334
LITG AGFI S+ + + YP++ +DKL Y SN + S+ + NF+F++ D+
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 335 S--ADLVNFILLTESIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVL 475
+ L F++ I+ I H FAA++ VD SF + FTKNNI T L
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNL 124
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3
SV=1
Length = 338
Score = 64 bits (155), Expect = 3e-010
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +2
Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLKNLHPSRSSSNFKFIKGDI 331
+L+TG +G+I SH C +LI YK V+LD L S L +H S + + GDI
Sbjct: 3 VLVTGGSGYIGSHTCVQLIE--AGYKPVILDNLCNSKSSVLARIH-SLTGYTPELYAGDI 59
Query: 332 GSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 490
L++ I I ++HFA V S E+ NN++GT VLLEA +
Sbjct: 60 RDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMR 112
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus
jannaschii GN=MJ1055 PE=3 SV=1
Length = 326
Score = 64 bits (153), Expect = 5e-010
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Frame = +2
Query: 146 KPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----LKNLHPSRSSSNFK 313
K KNIL+TG+AGFI H+ L+ NY + K++ +D L+ N K ++ N+
Sbjct: 2 KYKNILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYT 61
Query: 314 FIKGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 481
FIK D D + L + ID I+H AQ V S N + + K+N GT + E
Sbjct: 62 FIKLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFE 117
>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis
thaliana GN=At2g34850 PE=2 SV=3
Length = 417
Score = 59 bits (142), Expect = 9e-009
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Frame = +2
Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-----YCSNLKNLHPSRSSSNFKFI 319
++L+TG AG+I SH RL+++ Y++ ++D L L+ L P +FI
Sbjct: 71 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNLGAVKILQQLFP--EPGKLQFI 126
Query: 320 KGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 481
D+G A+ VN I + D +MHFAA +V S ++ N T V+LE
Sbjct: 127 YADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLE 180
>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa
subsp. japonica GN=UEL-2 PE=2 SV=1
Length = 391
Score = 59 bits (142), Expect = 9e-009
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Frame = +2
Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLHPSRSSSNFKFI 319
++L+TG AG+I SH RL+R+ Y++ ++D L + L+ L P +FI
Sbjct: 51 HVLVTGGAGYIGSHATLRLLRD--NYRVTIVDNLSRGNMGAVRVLQRLFP--EPGRLQFI 106
Query: 320 KGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 484
D+G A VN I + D +MHFAA +V S + N T +LEA
Sbjct: 107 YADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEA 161
>sp|Q9SUN3|ARAE3_ARATH Putative UDP-arabinose 4-epimerase 3 OS=Arabidopsis
thaliana GN=At4g20460 PE=2 SV=2
Length = 411
Score = 59 bits (142), Expect = 9e-009
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Frame = +2
Query: 80 APRSTSPPRTCN*ALSDMGTAYKPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 259
AP TSP + S+ G + +L+TG AG+I SH RL+++ Y++ ++D L
Sbjct: 53 APSFTSPTAF---SRSEEGVTH----VLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLS 103
Query: 260 -----YCSNLKNLHPSRSSSNFKFIKGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSF 424
L+ L P +FI D+G A V+ I + D +MHFAA +V S
Sbjct: 104 RGNLGAVKVLQGLFP--EPGRLQFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGEST 161
Query: 425 GNSFEFTKNNIYGTHVLLEA 484
+ ++ N T V+LEA
Sbjct: 162 LDPLKYYHNITSNTLVVLEA 181
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana
GN=MUR4 PE=1 SV=1
Length = 419
Score = 58 bits (139), Expect = 2e-008
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Frame = +2
Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-----YCSNLKNLHPSRSSSNFKFI 319
++L+TG AG+I SH RL++ Y++ ++D L L+ L P +FI
Sbjct: 72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFP--EPGRLQFI 127
Query: 320 KGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 481
D+G A VN I + D +MHFAA +V S ++ N T V+LE
Sbjct: 128 YADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLE 181
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans GN=galE
PE=3 SV=1
Length = 334
Score = 58 bits (139), Expect = 2e-008
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Frame = +2
Query: 179 GFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLHPSRSSSNFKFIKGDIGSADLVNFI 358
G+I SH L+ + ++VLD NL+ H + + S+ F GDI L++ I
Sbjct: 10 GYIGSHTVLFLLEQGEQ--VIVLD------NLQKGH-AGALSDVTFYHGDIRDDQLLDTI 60
Query: 359 LLTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 481
T SIDT++HFAA + V S E+ +NN+ GTH LL+
Sbjct: 61 FTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLK 101
>sp|Q8H930|ARAE1_ORYSJ Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa
subsp. japonica GN=UEL-1 PE=2 SV=2
Length = 421
Score = 57 bits (137), Expect = 3e-008
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Frame = +2
Query: 92 TSPPRTCN*ALSDMGTAYKP--KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-- 259
T PP C+ + + ++P ++L+TG AG+I SH RL+++ +++ ++D L
Sbjct: 53 TQPP--CHRRTPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKD--SFRVTIVDNLSRG 108
Query: 260 ---YCSNLKNLHPSRSSSNFKFIKGDIGSADLVNFILLTESIDTIMHFAAQTHVDNSFGN 430
L+NL +FI D+G VN I + D +MHFAA +V S
Sbjct: 109 NMGAIKVLQNLF--SEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYVGESTLE 166
Query: 431 SFEFTKNNIYGTHVLLEA 484
+ N T V+LEA
Sbjct: 167 PLRYYHNITSNTLVVLEA 184
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,542,086,135
Number of Sequences: 462764
Number of Extensions: 23542086135
Number of Successful Extensions: 219543700
Number of sequences better than 0.0: 0
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