BLASTX 7.6.2
Query= RU22405 /QuerySize=519
(518 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8VYB1|MED31_ARATH Mediator of RNA polymerase II transcriptio... 235 2e-061
sp|A0JNN3|MED31_BOVIN Mediator of RNA polymerase II transcriptio... 116 1e-025
sp|Q6DH26|MED31_DANRE Mediator of RNA polymerase II transcriptio... 116 1e-025
sp|Q9CXU1|MED31_MOUSE Mediator of RNA polymerase II transcriptio... 115 2e-025
sp|Q9Y3C7|MED31_HUMAN Mediator of RNA polymerase II transcriptio... 115 2e-025
sp|Q6GQA1|MD31B_XENLA Mediator of RNA polymerase II transcriptio... 112 1e-024
sp|Q28FE2|MED31_XENTR Mediator of RNA polymerase II transcriptio... 112 1e-024
sp|Q4QR03|MD31A_XENLA Mediator of RNA polymerase II transcriptio... 111 2e-024
sp|Q8IH24|MED31_DROME Mediator of RNA polymerase II transcriptio... 111 2e-024
sp|Q9USH1|MED31_SCHPO Mediator of RNA polymerase II transcriptio... 109 1e-023
sp|Q17DI7|MED31_AEDAE Mediator of RNA polymerase II transcriptio... 102 1e-021
sp|Q61DP3|MED31_CAEBR Mediator of RNA polymerase II transcriptio... 102 1e-021
sp|Q8MPD6|MED31_TAESO Mediator of RNA polymerase II transcriptio... 101 3e-021
sp|Q59P87|MED31_CANAL Mediator of RNA polymerase II transcriptio... 98 2e-020
sp|P91869|MED31_CAEEL Mediator of RNA polymerase II transcriptio... 97 3e-020
sp|Q6CAU9|MED31_YARLI Mediator of RNA polymerase II transcriptio... 96 8e-020
sp|Q8SU76|MED31_ENCCU Mediator of RNA polymerase II transcriptio... 88 2e-017
sp|Q6BUN9|MED31_DEBHA Mediator of RNA polymerase II transcriptio... 87 5e-017
sp|Q5K785|MED31_CRYNE Mediator of RNA polymerase II transcriptio... 86 8e-017
sp|Q0U957|MED31_PHANO Mediator of RNA polymerase II transcriptio... 82 1e-015
sp|Q7SF81|MED31_NEUCR Mediator of RNA polymerase II transcriptio... 79 1e-014
sp|Q75EB3|MED31_ASHGO Mediator of RNA polymerase II transcriptio... 75 1e-013
sp|Q4P308|MED31_USTMA Mediator of RNA polymerase II transcriptio... 70 6e-012
sp|Q6CUD2|MED31_KLULA Mediator of RNA polymerase II transcriptio... 68 3e-011
sp|P38633|MED31_YEAST Mediator of RNA polymerase II transcriptio... 68 3e-011
sp|Q6FR78|MED31_CANGA Mediator of RNA polymerase II transcriptio... 64 3e-010
>sp|Q8VYB1|MED31_ARATH Mediator of RNA polymerase II transcription subunit 31
OS=Arabidopsis thaliana GN=At5g19910 PE=2 SV=1
Length = 196
Score = 235 bits (597), Expect = 2e-061
Identities = 112/133 (84%), Positives = 117/133 (87%), Gaps = 5/133 (3%)
Frame = +2
Query: 35 MASGTE-SDEASDTP----EIYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 199
MAS E D+AS+ P YKDPD GRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE
Sbjct: 1 MASPEEMGDDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 60
Query: 200 AFIGYLKYLQYWQRPEYTKFIMYPHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWK 379
AFIGYLKYLQYWQRPEY KFIMYPHCL+FLE LQN NFR AMAHPANKELAHRQQFY+WK
Sbjct: 61 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWK 120
Query: 380 NYRHNRLKHILPR 418
NYR+NRLKHILPR
Sbjct: 121 NYRNNRLKHILPR 133
>sp|A0JNN3|MED31_BOVIN Mediator of RNA polymerase II transcription subunit 31
OS=Bos taurus GN=MED31 PE=2 SV=1
Length = 131
Score = 116 bits (288), Expect = 1e-025
Identities = 50/105 (47%), Positives = 68/105 (64%)
Frame = +2
Query: 89 DPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMY 268
D R RF LELEF+QCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKY 69
Query: 269 PHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
P CL LE LQ +FR + + + QQ W++Y R++
Sbjct: 70 PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
>sp|Q6DH26|MED31_DANRE Mediator of RNA polymerase II transcription subunit 31
OS=Danio rerio GN=med31 PE=2 SV=2
Length = 136
Score = 116 bits (288), Expect = 1e-025
Identities = 49/108 (45%), Positives = 68/108 (62%)
Frame = +2
Query: 80 IYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKF 259
+ + + RQRF LELEF+QCLANP Y+++LAQ Y ++ F+ YLKYL YW+ PEY KF
Sbjct: 4 VMETDEQARQRFQLELEFVQCLANPNYLNFLAQRGYLREKPFVNYLKYLLYWKEPEYAKF 63
Query: 260 IMYPHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
+ YPHCL LE LQ +FR + + + QQ W++Y R +
Sbjct: 64 LKYPHCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRTR 111
>sp|Q9CXU1|MED31_MOUSE Mediator of RNA polymerase II transcription subunit 31
OS=Mus musculus GN=Med31 PE=1 SV=2
Length = 131
Score = 115 bits (287), Expect = 2e-025
Identities = 50/105 (47%), Positives = 68/105 (64%)
Frame = +2
Query: 89 DPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMY 268
D R RF LELEF+QCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKY 69
Query: 269 PHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
P CL LE LQ +FR + + + QQ W++Y R++
Sbjct: 70 PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 114
>sp|Q9Y3C7|MED31_HUMAN Mediator of RNA polymerase II transcription subunit 31
OS=Homo sapiens GN=MED31 PE=1 SV=1
Length = 131
Score = 115 bits (286), Expect = 2e-025
Identities = 50/105 (47%), Positives = 68/105 (64%)
Frame = +2
Query: 89 DPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMY 268
D R RF LELEF+QCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ Y
Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKDPEYAKYLKY 69
Query: 269 PHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
P CL LE LQ +FR + + + QQ W++Y R++
Sbjct: 70 PQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
>sp|Q6GQA1|MD31B_XENLA Mediator of RNA polymerase II transcription subunit 31-B
OS=Xenopus laevis GN=med31-B PE=2 SV=2
Length = 129
Score = 112 bits (280), Expect = 1e-024
Identities = 48/100 (48%), Positives = 67/100 (67%)
Frame = +2
Query: 104 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
R RF LELEF+QCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL
Sbjct: 13 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLH 72
Query: 284 FLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
LE LQ +FR + + + QQ W++Y R++
Sbjct: 73 MLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 112
>sp|Q28FE2|MED31_XENTR Mediator of RNA polymerase II transcription subunit 31
OS=Xenopus tropicalis GN=med31 PE=2 SV=2
Length = 128
Score = 112 bits (280), Expect = 1e-024
Identities = 48/100 (48%), Positives = 67/100 (67%)
Frame = +2
Query: 104 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
R RF LELEF+QCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL
Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLH 71
Query: 284 FLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
LE LQ +FR + + + QQ W++Y R++
Sbjct: 72 MLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 111
>sp|Q4QR03|MD31A_XENLA Mediator of RNA polymerase II transcription subunit 31-A
OS=Xenopus laevis GN=med31-A PE=2 SV=2
Length = 128
Score = 111 bits (277), Expect = 2e-024
Identities = 47/100 (47%), Positives = 66/100 (66%)
Frame = +2
Query: 104 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
R RF LELEF+QCLANP Y+++LAQ YF+D+ F+ Y+KYL YW+ PEY K++ YP CL
Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKPFVNYMKYLLYWKEPEYAKYLKYPQCLH 71
Query: 284 FLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
LE LQ +FR + + + QQ W++Y R++
Sbjct: 72 MLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 111
>sp|Q8IH24|MED31_DROME Mediator of RNA polymerase II transcription subunit 31
OS=Drosophila melanogaster GN=MED31 PE=1 SV=2
Length = 204
Score = 111 bits (277), Expect = 2e-024
Identities = 46/102 (45%), Positives = 72/102 (70%)
Frame = +2
Query: 104 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
++R+ +ELEF+QCL+NP Y+++LAQ +F+D++FI YLKYLQYW+ P+Y K++MYP CL+
Sbjct: 19 KRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYAKYLMYPMCLY 78
Query: 284 FLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLKHI 409
FL+ LQ +FR + + + Q W++Y R+K I
Sbjct: 79 FLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLI 120
>sp|Q9USH1|MED31_SCHPO Mediator of RNA polymerase II transcription subunit 31
OS=Schizosaccharomyces pombe GN=med31 PE=2 SV=1
Length = 139
Score = 109 bits (270), Expect = 1e-023
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +2
Query: 86 KDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIM 265
K PDD + RF +ELEF+Q L+NP Y+++LAQ++YFEDEAF+ YL+Y++YW+ PEY KFI+
Sbjct: 9 KVPDD-KSRFEIELEFVQMLSNPWYLNFLAQHKYFEDEAFLQYLEYMEYWREPEYVKFII 67
Query: 266 YPHCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFW 376
YP CL L L+N FRN ++ + + + +Y W
Sbjct: 68 YPTCLHMLTLLKNPQFRNDISRADLSKQVNDEIYYEW 104
>sp|Q17DI7|MED31_AEDAE Mediator of RNA polymerase II transcription subunit 31
OS=Aedes aegypti GN=MED31 PE=3 SV=1
Length = 218
Score = 102 bits (254), Expect = 1e-021
Identities = 45/103 (43%), Positives = 64/103 (62%)
Frame = +2
Query: 95 DDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPH 274
D + RF ELEF+QCLANP Y+H+LAQ +F+D FI YLKYL +W+ PE K++ YP
Sbjct: 17 DAQKLRFQAELEFVQCLANPNYLHFLAQRGFFKDSNFINYLKYLLHWKDPEMAKYLKYPM 76
Query: 275 CLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLK 403
CL+FL+ LQ +FR + + + Q W++Y R +
Sbjct: 77 CLYFLDLLQYEHFRREIVNAQCCKFIDDQAILLWQHYTRRRTR 119
>sp|Q61DP3|MED31_CAEBR Mediator of RNA polymerase II transcription subunit 31
OS=Caenorhabditis briggsae GN=mdt-31 PE=3 SV=2
Length = 168
Score = 102 bits (253), Expect = 1e-021
Identities = 44/102 (43%), Positives = 65/102 (63%)
Frame = +2
Query: 92 PDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYP 271
P+ + RF +E EF+Q LANP Y+++LAQ YF++E F+ YLKYL YW+ P+Y + + +P
Sbjct: 4 PESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKNPQYARCLKFP 63
Query: 272 HCLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNR 397
CL LE LQ+ FR+AMA+ + + Q W+ Y R
Sbjct: 64 QCLHMLEALQSQQFRDAMAYGPSAKFVEDQVVLQWQFYLRKR 105
>sp|Q8MPD6|MED31_TAESO Mediator of RNA polymerase II transcription subunit 31
OS=Taenia solium GN=Ts24233 PE=2 SV=1
Length = 148
Score = 101 bits (250), Expect = 3e-021
Identities = 46/105 (43%), Positives = 62/105 (59%)
Frame = +2
Query: 95 DDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPH 274
+D RF +ELEF+Q L NP Y+ +LAQ F+ FI YL YLQYW+ P Y++FI YP
Sbjct: 25 EDPWVRFQIELEFVQSLGNPDYLTFLAQQGCFDKPEFINYLSYLQYWKSPSYSRFITYPF 84
Query: 275 CLFFLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNRLKHI 409
CL L+ LQ+ +FR +AH + Q WKNY R + +
Sbjct: 85 CLHMLDLLQSPDFRREVAHESVTRFIDDQMLLHWKNYLRKRAEMV 129
>sp|Q59P87|MED31_CANAL Mediator of RNA polymerase II transcription subunit 31
OS=Candida albicans GN=SOH1 PE=3 SV=1
Length = 146
Score = 98 bits (243), Expect = 2e-020
Identities = 42/69 (60%), Positives = 55/69 (79%)
Frame = +2
Query: 110 RFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFFL 289
R+ +ELEF+Q L+N Y++YLAQN YF DE FI YL YLQYW +PEY+KF++YP+CL L
Sbjct: 30 RWEIELEFVQSLSNIPYVNYLAQNNYFNDENFINYLNYLQYWTQPEYSKFLVYPNCLHIL 89
Query: 290 EQLQNANFR 316
+ LQ+ NFR
Sbjct: 90 KLLQDENFR 98
>sp|P91869|MED31_CAEEL Mediator of RNA polymerase II transcription subunit 31
OS=Caenorhabditis elegans GN=mdt-31 PE=2 SV=1
Length = 163
Score = 97 bits (241), Expect = 3e-020
Identities = 42/98 (42%), Positives = 63/98 (64%)
Frame = +2
Query: 104 RQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
+ RF +E EF+Q LANP Y+++LAQ YF++E F+ YLKYL YW+ P+Y + + +P CL
Sbjct: 8 KTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLKFPQCLH 67
Query: 284 FLEQLQNANFRNAMAHPANKELAHRQQFYFWKNYRHNR 397
LE LQ+ FR++MA+ + + Q W+ Y R
Sbjct: 68 MLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKR 105
>sp|Q6CAU9|MED31_YARLI Mediator of RNA polymerase II transcription subunit 31
OS=Yarrowia lipolytica GN=SOH1 PE=3 SV=1
Length = 160
Score = 96 bits (238), Expect = 8e-020
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +2
Query: 98 DGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHC 277
D RF ELEF+Q LANP Y+ YLA N+Y E F+ YL YL+YW+ P+Y +F++YP+C
Sbjct: 23 DRSLRFEAELEFVQSLANPQYLSYLAHNKYLESPEFLNYLSYLEYWREPKYARFLVYPNC 82
Query: 278 LFFLEQLQNANFRNAMAHPANKELAHRQQFYFW 376
L L+ LQ A FR ++ P + + +Y W
Sbjct: 83 LHVLKLLQYATFRKEISRPDFAKQLMDEFYYAW 115
>sp|Q8SU76|MED31_ENCCU Mediator of RNA polymerase II transcription subunit 31
OS=Encephalitozoon cuniculi GN=SOH1 PE=3 SV=1
Length = 103
Score = 88 bits (217), Expect = 2e-017
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +2
Query: 110 RFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFFL 289
RF ELEF+Q L NP Y+ +L + +FE E F YL+YL+YW+ PEY++F+ YP CL L
Sbjct: 5 RFERELEFVQLLCNPDYLRWLTREGHFESEEFRSYLRYLEYWRSPEYSRFLTYPQCLAVL 64
Query: 290 EQLQNANFRNAMAHPANKELA-HRQQFYFWKN 382
E L + N N M N LA QQ++ W N
Sbjct: 65 EHLNSENI-NDMLSDENFFLALGEQQYFIWLN 95
>sp|Q6BUN9|MED31_DEBHA Mediator of RNA polymerase II transcription subunit 31
OS=Debaryomyces hansenii GN=SOH1 PE=3 SV=2
Length = 135
Score = 87 bits (214), Expect = 5e-017
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +2
Query: 107 QRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFF 286
+R+ +ELEF+Q LAN Y+++LAQN Y + F+ Y++YL YW+ PEY+K+++YP+CL
Sbjct: 7 KRWEIELEFVQSLANIQYLNHLAQNNYLSNPEFLNYIEYLNYWKEPEYSKYLVYPNCLHI 66
Query: 287 LEQLQNANFRNAMAHP 334
L LQN FR + P
Sbjct: 67 LTLLQNEEFRKNILIP 82
>sp|Q5K785|MED31_CRYNE Mediator of RNA polymerase II transcription subunit 31
OS=Cryptococcus neoformans GN=SOH1 PE=3 SV=1
Length = 180
Score = 86 bits (212), Expect = 8e-017
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +2
Query: 50 ESDEASDTPEIYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQ 229
+S+ + TPE + + RF ELEFIQCLA+P Y+H L Y AF+ YLKYL+
Sbjct: 16 DSEAPARTPEKHAN----LVRFQSELEFIQCLAHPQYLHELHIQGYLGKPAFLNYLKYLE 71
Query: 230 YWQRPEYTKFIMYPHCLFFLEQLQNANFRNAM 325
YW+ P+Y +FI+YP CL +L LQ FR+ +
Sbjct: 72 YWREPQYVRFIIYPTCLVYLTLLQTELFRSRL 103
>sp|Q0U957|MED31_PHANO Mediator of RNA polymerase II transcription subunit 31
OS=Phaeosphaeria nodorum GN=SOH1 PE=3 SV=3
Length = 115
Score = 82 bits (202), Expect = 1e-015
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Frame = +2
Query: 71 TPEIYKDPD----DGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQ 238
+P + PD G RF LELEF+QCLANP Y++YLA +YF+ F+ YL YLQY+
Sbjct: 3 SPPAQERPDVPLHGGFTRFELELEFVQCLANPVYLNYLATQKYFDKPEFVAYLDYLQYFA 62
Query: 239 RPEYTKFIMYP-HCLFFLEQLQNANFRNAMAHP--ANK 343
P+Y KF+ +P L LE LQ FR + P ANK
Sbjct: 63 EPKYIKFLHHPGPTLRALELLQQERFRQDIITPGLANK 100
>sp|Q7SF81|MED31_NEUCR Mediator of RNA polymerase II transcription subunit 31
OS=Neurospora crassa GN=soh-1 PE=3 SV=1
Length = 134
Score = 79 bits (193), Expect = 1e-014
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +2
Query: 101 GRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYP-HC 277
G RF LELEF+Q L NP Y+++LA + + AFI YL YLQYW RP Y K+I YP
Sbjct: 30 GYTRFELELEFVQALGNPLYLNHLASRKLLSNPAFIAYLDYLQYWSRPPYLKYITYPGPT 89
Query: 278 LFFLEQLQNANFRNAMAHP 334
L LE LQ FR + P
Sbjct: 90 LKNLELLQQEKFRQDIISP 108
>sp|Q75EB3|MED31_ASHGO Mediator of RNA polymerase II transcription subunit 31
OS=Ashbya gossypii GN=SOH1 PE=3 SV=1
Length = 127
Score = 75 bits (184), Expect = 1e-013
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 6/88 (6%)
Frame = +2
Query: 53 SDEASDTPEIYKDPDDGRQ---RFLLELEFIQCLANPTYIHY-LAQNRYFEDEAFIGYLK 220
S ++S+ P ++ +G Q RF +ELEF+Q LAN Y+ + L Q++ ++D F YLK
Sbjct: 2 SAKSSEPP--FEPSSEGEQLPSRFEVELEFVQSLANIPYVTFLLTQHQIWQDPRFKAYLK 59
Query: 221 YLQYWQRPEYTKFIMYPHCLFFLEQLQN 304
YL+YW P YT+FI+YP+CLF L+ L +
Sbjct: 60 YLEYWCEPPYTQFIVYPNCLFVLKLLNS 87
>sp|Q4P308|MED31_USTMA Mediator of RNA polymerase II transcription subunit 31
OS=Ustilago maydis GN=SOH1 PE=3 SV=1
Length = 153
Score = 70 bits (170), Expect = 6e-012
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 113 FLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFFLE 292
F +LEF+ LANP Y+++LA + +F YLKYL Y++ P+Y K++ YP L FL+
Sbjct: 33 FSRDLEFLSSLANPYYLNHLALSGALSSPSFKRYLKYLDYFRHPKYVKYLHYPQALHFLD 92
Query: 293 QLQN-ANFRNAMAHPANKELAHRQQFYFWKNYR 388
LQN FR A PA +Q W +R
Sbjct: 93 LLQNEEEFRLACRDPAFAGEVMAKQIGHWATWR 125
>sp|Q6CUD2|MED31_KLULA Mediator of RNA polymerase II transcription subunit 31
OS=Kluyveromyces lactis GN=SOH1 PE=3 SV=1
Length = 124
Score = 68 bits (164), Expect = 3e-011
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 110 RFLLELEFIQCLANPTYIHY-LAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFF 286
RF +ELEF+Q LAN Y+ Y L Q + ++D F YLKYL+YW PEY + I+YP+ LF
Sbjct: 19 RFEIELEFVQSLANIPYVTYLLTQLQLWQDPKFKRYLKYLEYWHEPEYAQCIVYPNSLFV 78
Query: 287 LEQL 298
L+ L
Sbjct: 79 LKLL 82
>sp|P38633|MED31_YEAST Mediator of RNA polymerase II transcription subunit 31
OS=Saccharomyces cerevisiae GN=SOH1 PE=1 SV=1
Length = 127
Score = 68 bits (164), Expect = 3e-011
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +2
Query: 110 RFLLELEFIQCLANPTYIHY-LAQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLFF 286
RF +ELEFIQ LAN Y+ Y L Q + ++ F YLKYL+YW P Y++ I+YP+CLF
Sbjct: 22 RFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFI 81
Query: 287 LEQL 298
L+ L
Sbjct: 82 LKLL 85
>sp|Q6FR78|MED31_CANGA Mediator of RNA polymerase II transcription subunit 31
OS=Candida glabrata GN=SOH1 PE=3 SV=1
Length = 130
Score = 64 bits (155), Expect = 3e-010
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +2
Query: 110 RFLLELEFIQCLANPTYIHYL--AQNRYFEDEAFIGYLKYLQYWQRPEYTKFIMYPHCLF 283
RF +ELEF+Q LAN Y+ YL Q ++D F YLKYL+YW P Y + I+YP+ LF
Sbjct: 24 RFEVELEFVQSLANIPYVTYLLTQQQLLWKDPKFKNYLKYLEYWCEPPYAQCIVYPNALF 83
Query: 284 FLEQL 298
L+ L
Sbjct: 84 ILKLL 88
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,542,086,135
Number of Sequences: 462764
Number of Extensions: 23542086135
Number of Successful Extensions: 219543700
Number of sequences better than 0.0: 0
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