BLASTX 7.6.2
Query= RU22422 /QuerySize=248
(247 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3MHF8|LS14A_BOVIN Protein LSM14 homolog A OS=Bos taurus GN=L... 68 1e-011
sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN... 68 1e-011
sp|Q8K2F8|LS14A_MOUSE Protein LSM14 homolog A OS=Mus musculus GN... 68 1e-011
sp|Q5R4R4|LS14A_PONAB Protein LSM14 homolog A OS=Pongo abelii GN... 68 1e-011
sp|Q566L7|LS14B_XENTR Protein LSM14 homolog B OS=Xenopus tropica... 67 2e-011
sp|Q9BX40|LS14B_HUMAN Protein LSM14 homolog B OS=Homo sapiens GN... 65 8e-011
sp|Q8CGC4|LS14B_MOUSE Protein LSM14 homolog B OS=Mus musculus GN... 65 8e-011
sp|Q9HGL3|SUM2_SCHPO Protein sum2 OS=Schizosaccharomyces pombe G... 59 8e-009
sp|P45978|SCD6_YEAST Protein SCD6 OS=Saccharomyces cerevisiae GN... 52 6e-007
>sp|Q3MHF8|LS14A_BOVIN Protein LSM14 homolog A OS=Bos taurus GN=LSM14A PE=2
SV=1
Length = 463
Score = 68 bits (164), Expect = 1e-011
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
YIGS ISL SK+EIRYEG+LY I+TE S++ L VRSFGTE R D P P
Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPP 57
>sp|Q8ND56|LS14A_HUMAN Protein LSM14 homolog A OS=Homo sapiens GN=LSM14A PE=1
SV=3
Length = 463
Score = 68 bits (164), Expect = 1e-011
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
YIGS ISL SK+EIRYEG+LY I+TE S++ L VRSFGTE R D P P
Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPP 57
>sp|Q8K2F8|LS14A_MOUSE Protein LSM14 homolog A OS=Mus musculus GN=Lsm14a PE=1
SV=1
Length = 462
Score = 68 bits (164), Expect = 1e-011
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
YIGS ISL SK+EIRYEG+LY I+TE S++ L VRSFGTE R D P P
Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPP 57
>sp|Q5R4R4|LS14A_PONAB Protein LSM14 homolog A OS=Pongo abelii GN=LSM14A PE=2
SV=1
Length = 463
Score = 68 bits (164), Expect = 1e-011
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
YIGS ISL SK+EIRYEG+LY I+TE S++ L VRSFGTE R D P P
Sbjct: 7 YIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPP 57
>sp|Q566L7|LS14B_XENTR Protein LSM14 homolog B OS=Xenopus tropicalis GN=lsm14b
PE=2 SV=1
Length = 382
Score = 67 bits (162), Expect = 2e-011
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
YIGS ISL SK++IRYEG+LY I+TE S++ L VRSFGTE R D P P
Sbjct: 7 YIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPAPP 57
>sp|Q9BX40|LS14B_HUMAN Protein LSM14 homolog B OS=Homo sapiens GN=LSM14B PE=1
SV=1
Length = 385
Score = 65 bits (157), Expect = 8e-011
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
Y+GS ISL SK++IRYEG+LY I+T+ S++ L VRSFGTE R D P P
Sbjct: 9 YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPP 59
>sp|Q8CGC4|LS14B_MOUSE Protein LSM14 homolog B OS=Mus musculus GN=Lsm14b PE=2
SV=2
Length = 385
Score = 65 bits (157), Expect = 8e-011
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPTNP 220
Y+GS ISL SK++IRYEG+LY I+T+ S++ L VRSFGTE R D P P
Sbjct: 9 YLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPP 59
>sp|Q9HGL3|SUM2_SCHPO Protein sum2 OS=Schizosaccharomyces pombe GN=sum2 PE=2
SV=1
Length = 426
Score = 59 bits (140), Expect = 8e-009
Identities = 27/46 (58%), Positives = 39/46 (84%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKD 205
+IGS ISL SKS+IRY G+L +IN+++S++ L++VR GTEGRK+D
Sbjct: 4 FIGSRISLISKSDIRYVGILQDINSQDSTLALKHVRWCGTEGRKQD 49
>sp|P45978|SCD6_YEAST Protein SCD6 OS=Saccharomyces cerevisiae GN=SCD6 PE=1
SV=1
Length = 349
Score = 52 bits (124), Expect = 6e-007
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 68 YIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGP 211
YIG ISL S ++ RY G+L +I++E+ ++ L+ VR FGTEGRK GP
Sbjct: 4 YIGKTISLISVTDNRYVGLLEDIDSEKGTVTLKEVRCFGTEGRKNWGP 51
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,542,086,135
Number of Sequences: 462764
Number of Extensions: 23542086135
Number of Successful Extensions: 219543700
Number of sequences better than 0.0: 0
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