BLASTX 7.6.2
Query= RU22716 /QuerySize=547
(546 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28H87|PR38A_XENTR Pre-mRNA-splicing factor 38A OS=Xenopus tr... 87 7e-017
sp|Q4FK66|PR38A_MOUSE Pre-mRNA-splicing factor 38A OS=Mus muscul... 86 9e-017
sp|Q0P5I6|PR38A_BOVIN Pre-mRNA-splicing factor 38A OS=Bos taurus... 86 1e-016
sp|Q8NAV1|PR38A_HUMAN Pre-mRNA-splicing factor 38A OS=Homo sapie... 86 1e-016
sp|Q8HXH6|PR38A_MACFA Pre-mRNA-splicing factor 38A OS=Macaca fas... 86 1e-016
sp|Q5RDD2|PR38A_PONAB Pre-mRNA-splicing factor 38A OS=Pongo abel... 86 1e-016
sp|Q6DHU4|PR38A_DANRE Pre-mRNA-splicing factor 38A OS=Danio reri... 86 2e-016
sp|Q4FZQ6|PR38A_XENLA Pre-mRNA-splicing factor 38A OS=Xenopus la... 86 2e-016
sp|Q9UUD2|PRP38_SCHPO Pre-mRNA-splicing factor 38 OS=Schizosacch... 54 4e-007
>sp|Q28H87|PR38A_XENTR Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis
GN=prpf38a PE=2 SV=1
Length = 312
Score = 87 bits (213), Expect = 7e-017
Identities = 36/54 (66%), Positives = 49/54 (90%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK 270
AE +VDKAMEL ++GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K
Sbjct: 44 AELVVDKAMELKYVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFK 97
>sp|Q4FK66|PR38A_MOUSE Pre-mRNA-splicing factor 38A OS=Mus musculus GN=Prpf38a
PE=1 SV=1
Length = 312
Score = 86 bits (212), Expect = 9e-017
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK*VFM 282
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K V M
Sbjct: 44 AELVVDKAMELKFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRM 101
>sp|Q0P5I6|PR38A_BOVIN Pre-mRNA-splicing factor 38A OS=Bos taurus GN=PRPF38A
PE=2 SV=1
Length = 312
Score = 86 bits (211), Expect = 1e-016
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK*VFM 282
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K V M
Sbjct: 44 AELVVDKAMELRFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRM 101
>sp|Q8NAV1|PR38A_HUMAN Pre-mRNA-splicing factor 38A OS=Homo sapiens GN=PRPF38A
PE=1 SV=1
Length = 312
Score = 86 bits (211), Expect = 1e-016
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK*VFM 282
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K V M
Sbjct: 44 AELVVDKAMELRFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRM 101
>sp|Q8HXH6|PR38A_MACFA Pre-mRNA-splicing factor 38A OS=Macaca fascicularis
GN=PRPF38A PE=2 SV=1
Length = 312
Score = 86 bits (211), Expect = 1e-016
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK*VFM 282
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K V M
Sbjct: 44 AELVVDKAMELRFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRM 101
>sp|Q5RDD2|PR38A_PONAB Pre-mRNA-splicing factor 38A OS=Pongo abelii GN=PRPF38A
PE=2 SV=1
Length = 312
Score = 86 bits (211), Expect = 1e-016
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK*VFM 282
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K V M
Sbjct: 44 AELVVDKAMELRFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRM 101
>sp|Q6DHU4|PR38A_DANRE Pre-mRNA-splicing factor 38A OS=Danio rerio GN=prpf38a
PE=2 SV=1
Length = 313
Score = 86 bits (210), Expect = 2e-016
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK 270
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K
Sbjct: 44 AELVVDKAMELKFVGGVYGGNVKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFK 97
>sp|Q4FZQ6|PR38A_XENLA Pre-mRNA-splicing factor 38A OS=Xenopus laevis GN=prpf38a
PE=2 SV=1
Length = 312
Score = 86 bits (210), Expect = 2e-016
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = +1
Query: 109 AETLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK 270
AE +VDKAMEL +GG++GGN KPTPF+CL +K+LQIQ EK+I++EFIKN+D+K
Sbjct: 44 AELVVDKAMELKFVGGVYGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFK 97
>sp|Q9UUD2|PRP38_SCHPO Pre-mRNA-splicing factor 38 OS=Schizosaccharomyces pombe
GN=prp38 PE=2 SV=1
Length = 210
Score = 54 bits (129), Expect = 4e-007
Identities = 24/52 (46%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 TLVDKAMELDHIGGIFGGNRKPTPFMCLVMKVLQIQSEKEIVIEFIKNDDYK 270
+LVD+A+ L++IGG + GN++PT F+CL+ K+LQI EKEI+ +++ ++K
Sbjct: 50 SLVDRAVRLEYIGGQY-GNQRPTEFICLLYKLLQIAPEKEIIQQYLSIPEFK 100
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,872,341,632
Number of Sequences: 462764
Number of Extensions: 23872341632
Number of Successful Extensions: 226348076
Number of sequences better than 0.0: 0
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