BLASTX 7.6.2
Query= RU22731 /QuerySize=266
(265 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4FUI2|RUXE_BOVIN Small nuclear ribonucleoprotein E OS=Bos ta... 93 3e-019
sp|P62303|RUXE_CHICK Small nuclear ribonucleoprotein E OS=Gallus... 93 3e-019
sp|P62304|RUXE_HUMAN Small nuclear ribonucleoprotein E OS=Homo s... 93 3e-019
sp|P62305|RUXE_MOUSE Small nuclear ribonucleoprotein E OS=Mus mu... 93 3e-019
sp|A1XQR9|RUXE_PIG Small nuclear ribonucleoprotein E OS=Sus scro... 93 3e-019
sp|Q7ZUG0|RUXE_DANRE Small nuclear ribonucleoprotein E OS=Danio ... 91 1e-018
sp|Q9VLV5|RUXE_DROME Probable small nuclear ribonucleoprotein E ... 91 1e-018
sp|Q5VYJ4|RUEL1_HUMAN Putative small nuclear ribonucleoprotein p... 90 2e-018
sp|A8XDT0|RUXE_CAEBR Probable small nuclear ribonucleoprotein E ... 84 2e-016
sp|Q9XTU6|RUXE_CAEEL Probable small nuclear ribonucleoprotein E ... 81 1e-015
sp|Q9USZ3|RUXE_SCHPO Small nuclear ribonucleoprotein E OS=Schizo... 75 1e-013
sp|Q12330|RUXE_YEAST Small nuclear ribonucleoprotein E OS=Saccha... 69 6e-012
>sp|A4FUI2|RUXE_BOVIN Small nuclear ribonucleoprotein E OS=Bos taurus GN=SNRPE
PE=3 SV=1
Length = 92
Score = 93 bits (230), Expect = 3e-019
Identities = 42/55 (76%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|P62303|RUXE_CHICK Small nuclear ribonucleoprotein E OS=Gallus gallus
GN=SNRPE PE=3 SV=1
Length = 92
Score = 93 bits (230), Expect = 3e-019
Identities = 42/55 (76%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|P62304|RUXE_HUMAN Small nuclear ribonucleoprotein E OS=Homo sapiens GN=SNRPE
PE=1 SV=1
Length = 92
Score = 93 bits (230), Expect = 3e-019
Identities = 42/55 (76%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|P62305|RUXE_MOUSE Small nuclear ribonucleoprotein E OS=Mus musculus GN=Snrpe
PE=2 SV=1
Length = 92
Score = 93 bits (230), Expect = 3e-019
Identities = 42/55 (76%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|A1XQR9|RUXE_PIG Small nuclear ribonucleoprotein E OS=Sus scrofa GN=SNRPE
PE=3 SV=1
Length = 92
Score = 93 bits (230), Expect = 3e-019
Identities = 42/55 (76%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|Q7ZUG0|RUXE_DANRE Small nuclear ribonucleoprotein E OS=Danio rerio GN=snrpe
PE=2 SV=1
Length = 92
Score = 91 bits (225), Expect = 1e-018
Identities = 41/55 (74%), Positives = 51/55 (92%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++RI +WL+EQ ++RIEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63
>sp|Q9VLV5|RUXE_DROME Probable small nuclear ribonucleoprotein E OS=Drosophila
melanogaster GN=CG18591 PE=1 SV=1
Length = 94
Score = 91 bits (224), Expect = 1e-018
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ+++R+Q+WL+E +RIEG I+GFDEYMNLVLDDAEE
Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEE 62
>sp|Q5VYJ4|RUEL1_HUMAN Putative small nuclear ribonucleoprotein polypeptide
E-like protein 1 OS=Homo sapiens GN=SNRPEL1 PE=5 SV=1
Length = 92
Score = 90 bits (222), Expect = 2e-018
Identities = 40/55 (72%), Positives = 52/55 (94%)
Frame = -2
Query: 165 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
KVQ++M QPINLIFR+LQ++++IQ+WL+EQ +++IEG IIGFDEYMNLVLDDAEE
Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEE 63
>sp|A8XDT0|RUXE_CAEBR Probable small nuclear ribonucleoprotein E
OS=Caenorhabditis briggsae GN=snr-6 PE=3 SV=1
Length = 90
Score = 84 bits (205), Expect = 2e-016
Identities = 35/59 (59%), Positives = 49/59 (83%)
Frame = -2
Query: 177 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
M+ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEE
Sbjct: 1 MSQRKIQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEE 59
>sp|Q9XTU6|RUXE_CAEEL Probable small nuclear ribonucleoprotein E
OS=Caenorhabditis elegans GN=snr-6 PE=2 SV=1
Length = 90
Score = 81 bits (199), Expect = 1e-015
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = -2
Query: 177 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
M++ K+ ++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEE
Sbjct: 1 MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEE 59
>sp|Q9USZ3|RUXE_SCHPO Small nuclear ribonucleoprotein E OS=Schizosaccharomyces
pombe GN=sme1 PE=1 SV=1
Length = 84
Score = 75 bits (182), Expect = 1e-013
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = -2
Query: 171 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDA 7
S +VQ++M PIN IF+ LQ + IWLFEQ D+R++G+I GFDE+MN+VLDDA
Sbjct: 2 SGRVQKVMIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDA 56
>sp|Q12330|RUXE_YEAST Small nuclear ribonucleoprotein E OS=Saccharomyces
cerevisiae GN=SME1 PE=1 SV=1
Length = 94
Score = 69 bits (167), Expect = 6e-012
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = -2
Query: 171 STKVQ-RIMTQPINLIFRFLQSKARIQIWLFEQKDVRIEGRIIGFDEYMNLVLDDAEE 1
S KV+ + M PIN IF FLQ + + IWLFEQ +RI+G+I+GFDE+MN+V+D+A E
Sbjct: 2 SNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVE 59
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,872,341,632
Number of Sequences: 462764
Number of Extensions: 23872341632
Number of Successful Extensions: 226348076
Number of sequences better than 0.0: 0
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