BLASTX 7.6.2
Query= RU23500 /QuerySize=881
(880 letters)
Database: UniProt/Swiss-Prot;
462,764 sequences; 163,773,382 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q40089|ATP4_IPOBA ATP synthase subunit delta', mitochondrial ... 146 2e-034
sp|Q96252|ATP4_ARATH ATP synthase subunit delta', mitochondrial ... 141 7e-033
sp|Q41000|ATP4_PEA ATP synthase subunit delta', mitochondrial OS... 137 1e-031
sp|Q55F42|ATPD_DICDI ATP synthase subunit delta, mitochondrial O... 63 2e-009
sp|Q9P6R6|ATPD_SCHPO ATP synthase subunit delta, mitochondrial O... 59 3e-008
sp|P56525|ATPD_NEUCR ATP synthase subunit delta, mitochondrial O... 57 1e-007
sp|A5GV56|ATPE_SYNR3 ATP synthase epsilon chain OS=Synechococcus... 53 2e-006
sp|Q0BQE9|ATPE_GRABC ATP synthase epsilon chain OS=Granulibacter... 52 3e-006
sp|Q4FP39|ATPE_PELUB ATP synthase epsilon chain OS=Pelagibacter ... 51 1e-005
sp|P80504|ATPO_SOLTU ATP synthase subunit O, mitochondrial (Frag... 51 1e-005
>sp|Q40089|ATP4_IPOBA ATP synthase subunit delta', mitochondrial OS=Ipomoea
batatas PE=1 SV=1
Length = 200
Score = 146 bits (367), Expect = 2e-034
Identities = 71/85 (83%), Positives = 78/85 (91%)
Frame = +3
Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494
+KLTVNFVLPY+SEL+ KEVDMVIIPA+TGQMGVLPGHVATIAELKPGV+SVHEGNDV+K
Sbjct: 68 SKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSK 127
Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569
YFVS GFAFIHANS+ADII P
Sbjct: 128 YFVSGGFAFIHANSFADIIAVEAVP 152
Score = 94 bits (231), Expect = 1e-018
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = +1
Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714
AVEAVP+DR+D +LVQKGLAEFTQKLN+ASTD+EKAEAQIGVDVHS L+AALTG
Sbjct: 147 AVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200
Score = 65 bits (156), Expect = 7e-010
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 RRATALLTRPASSLRAARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKPRPP 295
R ++ LL R A+++ R FSTD+ + +F EAWKK+IP++DPPKTP ++M PRP
Sbjct: 3 RHSSRLLAR-ATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPA 61
Query: 296 TP.LDP 313
TP P
Sbjct: 62 TPSSIP 67
>sp|Q96252|ATP4_ARATH ATP synthase subunit delta', mitochondrial OS=Arabidopsis
thaliana GN=At5g47030 PE=1 SV=1
Length = 203
Score = 141 bits (354), Expect = 7e-033
Identities = 69/85 (81%), Positives = 74/85 (87%)
Frame = +3
Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494
TKLTVNFVLPY SEL+ KEVDMVIIPASTGQMGVLPGHV TIAELKPG++SVHEG DV K
Sbjct: 71 TKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKK 130
Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569
YF+SSGFAF+HANS ADII P
Sbjct: 131 YFLSSGFAFLHANSVADIIAVEAVP 155
Score = 86 bits (210), Expect = 4e-016
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +1
Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714
AVEAVP+D +DPS VQKGLAEF QKL SA+TDLEKAEAQIGV+VHS ++AAL+G
Sbjct: 150 AVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALSG 203
Score = 61 bits (147), Expect = 7e-009
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Frame = +2
Query: 110 MLRRATALLTRPASSLRA----ARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSF 277
M ++A+ LL+R ++ + RAFST++ + +F EAWKKV P++DPP+TP +F
Sbjct: 1 MFKQASRLLSRSVAAASSKSVTTRAFSTELPSTL--DSTFVEAWKKVAPNMDPPQTPSAF 58
Query: 278 MKPRPPTP.LDP 313
MKPRP TP P
Sbjct: 59 MKPRPSTPSSIP 70
>sp|Q41000|ATP4_PEA ATP synthase subunit delta', mitochondrial OS=Pisum sativum
PE=3 SV=1
Length = 197
Score = 137 bits (343), Expect = 1e-031
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +3
Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494
TKLTVNFVLPY+S+L+AKEVD VIIPA+TG+MGVLPGHVATIAELKPGVL+V EG D TK
Sbjct: 65 TKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTK 124
Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569
YFVSSGF FIHANS ADII P
Sbjct: 125 YFVSSGFRFIHANSVADIIAVEAVP 149
Score = 81 bits (199), Expect = 7e-015
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = +1
Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714
AVEAVP++++D LVQKGL EFTQKLNSA+TDLEK EAQIG+DV S L++ALTG
Sbjct: 144 AVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALTG 197
Score = 69 bits (166), Expect = 5e-011
Identities = 34/55 (61%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +2
Query: 149 SSLRAARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKPRPPTP.LDP 313
S A R FSTDVA P N SF EAW+KV P+IDPPKTPL F+K RPP P P
Sbjct: 11 SRASATRRFSTDVA-TPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIP 64
>sp|Q55F42|ATPD_DICDI ATP synthase subunit delta, mitochondrial OS=Dictyostelium
discoideum GN=atp5D PE=3 SV=1
Length = 170
Score = 63 bits (151), Expect = 2e-009
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 321 LTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSV-HEGNDVTKY 497
LT + + P+ + K+ +V +P + G GV HV IAELKPGV+ + HE D+ K+
Sbjct: 37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96
Query: 498 FVSSGFAFIHANS 536
F+S GFAF++ ++
Sbjct: 97 FISGGFAFVNPDA 109
>sp|Q9P6R6|ATPD_SCHPO ATP synthase subunit delta, mitochondrial
OS=Schizosaccharomyces pombe GN=atp16 PE=2 SV=1
Length = 160
Score = 59 bits (142), Expect = 3e-008
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 318 KLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSV-HEGNDVTK 494
KL ++ LPY + V V IPA G+MG+L HV I LKPGV+SV E ++ +K
Sbjct: 30 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSK 89
Query: 495 YFVSSGFA 518
YF+S GFA
Sbjct: 90 YFISGGFA 97
>sp|P56525|ATPD_NEUCR ATP synthase subunit delta, mitochondrial OS=Neurospora
crassa GN=atp-16 PE=3 SV=2
Length = 165
Score = 57 bits (137), Expect = 1e-007
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 318 KLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK- 494
K+ ++ LP+ + +++V V IPA +G+MGVL HV +I +LKPG++ V E + K
Sbjct: 34 KIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQ 93
Query: 495 YFVSSGFAFIHANSYADI 548
YF+S GFA + S I
Sbjct: 94 YFLSGGFAVVQPGSKLSI 111
>sp|A5GV56|ATPE_SYNR3 ATP synthase epsilon chain OS=Synechococcus sp. (strain
RCC307) GN=atpC PE=3 SV=1
Length = 135
Score = 53 bits (126), Expect = 2e-006
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 369 EVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFA 518
+ D VI+P++TGQ+GVLPGHV+ + L GVL + +GN T + GFA
Sbjct: 18 QADEVILPSTTGQLGVLPGHVSLLTALDVGVLRMRDGNQWTAIALMGGFA 67
>sp|Q0BQE9|ATPE_GRABC ATP synthase epsilon chain OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=atpC PE=3 SV=1
Length = 135
Score = 52 bits (124), Expect = 3e-006
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +3
Query: 357 LSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KYFVSSGFAFI 524
L ++ VDMV+IPA+ G++GVLPGH I L+ G + +++ VT + +V+ GFA I
Sbjct: 15 LLSRSVDMVVIPAAEGELGVLPGHAPMIVLLQGGTIRLYQNGQVTDRLYVAGGFAEI 71
>sp|Q4FP39|ATPE_PELUB ATP synthase epsilon chain OS=Pelagibacter ubique GN=atpC
PE=3 SV=1
Length = 130
Score = 51 bits (120), Expect = 1e-005
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 327 VNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVS 506
+ V P S LS ++V V++PA G+MG+L H++ I+ LKPG++ + + Y+V
Sbjct: 7 IEIVNPEKSFLSKEDVTEVVVPAFEGEMGILKDHISIISFLKPGIIKIFSKSGEDNYYVE 66
Query: 507 SGFAFIHANS 536
G N+
Sbjct: 67 DGIVEFKNNN 76
>sp|P80504|ATPO_SOLTU ATP synthase subunit O, mitochondrial (Fragment)
OS=Solanum tuberosum PE=1 SV=1
Length = 37
Score = 51 bits (120), Expect = 1e-005
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 176 STDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKP 286
+TD+ V + +F EAWKKV+P++DPPKTP +FM P
Sbjct: 1 ATDLQAGYVADSNFTEAWKKVVPNVDPPKTPSAFMXP 37
Database: UniProt/Swiss-Prot
Posted date: Thu Apr 23 14:22:33 2009
Number of letters in database: 163,773,382
Number of sequences in database: 462,764
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,947,431,911
Number of Sequences: 462764
Number of Extensions: 24947431911
Number of Successful Extensions: 246995722
Number of sequences better than 0.0: 0
|