BLASTX 7.6.2 Query= RU23500 /QuerySize=881 (880 letters) Database: UniProt/Swiss-Prot; 462,764 sequences; 163,773,382 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q40089|ATP4_IPOBA ATP synthase subunit delta', mitochondrial ... 146 2e-034 sp|Q96252|ATP4_ARATH ATP synthase subunit delta', mitochondrial ... 141 7e-033 sp|Q41000|ATP4_PEA ATP synthase subunit delta', mitochondrial OS... 137 1e-031 sp|Q55F42|ATPD_DICDI ATP synthase subunit delta, mitochondrial O... 63 2e-009 sp|Q9P6R6|ATPD_SCHPO ATP synthase subunit delta, mitochondrial O... 59 3e-008 sp|P56525|ATPD_NEUCR ATP synthase subunit delta, mitochondrial O... 57 1e-007 sp|A5GV56|ATPE_SYNR3 ATP synthase epsilon chain OS=Synechococcus... 53 2e-006 sp|Q0BQE9|ATPE_GRABC ATP synthase epsilon chain OS=Granulibacter... 52 3e-006 sp|Q4FP39|ATPE_PELUB ATP synthase epsilon chain OS=Pelagibacter ... 51 1e-005 sp|P80504|ATPO_SOLTU ATP synthase subunit O, mitochondrial (Frag... 51 1e-005 >sp|Q40089|ATP4_IPOBA ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1 Length = 200 Score = 146 bits (367), Expect = 2e-034 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = +3 Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494 +KLTVNFVLPY+SEL+ KEVDMVIIPA+TGQMGVLPGHVATIAELKPGV+SVHEGNDV+K Sbjct: 68 SKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSK 127 Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569 YFVS GFAFIHANS+ADII P Sbjct: 128 YFVSGGFAFIHANSFADIIAVEAVP 152 Score = 94 bits (231), Expect = 1e-018 Identities = 46/54 (85%), Positives = 52/54 (96%) Frame = +1 Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714 AVEAVP+DR+D +LVQKGLAEFTQKLN+ASTD+EKAEAQIGVDVHS L+AALTG Sbjct: 147 AVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200 Score = 65 bits (156), Expect = 7e-010 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = +2 Query: 116 RRATALLTRPASSLRAARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKPRPP 295 R ++ LL R A+++ R FSTD+ + +F EAWKK+IP++DPPKTP ++M PRP Sbjct: 3 RHSSRLLAR-ATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPA 61 Query: 296 TP.LDP 313 TP P Sbjct: 62 TPSSIP 67 >sp|Q96252|ATP4_ARATH ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1 Length = 203 Score = 141 bits (354), Expect = 7e-033 Identities = 69/85 (81%), Positives = 74/85 (87%) Frame = +3 Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494 TKLTVNFVLPY SEL+ KEVDMVIIPASTGQMGVLPGHV TIAELKPG++SVHEG DV K Sbjct: 71 TKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKK 130 Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569 YF+SSGFAF+HANS ADII P Sbjct: 131 YFLSSGFAFLHANSVADIIAVEAVP 155 Score = 86 bits (210), Expect = 4e-016 Identities = 42/54 (77%), Positives = 49/54 (90%) Frame = +1 Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714 AVEAVP+D +DPS VQKGLAEF QKL SA+TDLEKAEAQIGV+VHS ++AAL+G Sbjct: 150 AVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALSG 203 Score = 61 bits (147), Expect = 7e-009 Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 6/72 (8%) Frame = +2 Query: 110 MLRRATALLTRPASSLRA----ARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSF 277 M ++A+ LL+R ++ + RAFST++ + +F EAWKKV P++DPP+TP +F Sbjct: 1 MFKQASRLLSRSVAAASSKSVTTRAFSTELPSTL--DSTFVEAWKKVAPNMDPPQTPSAF 58 Query: 278 MKPRPPTP.LDP 313 MKPRP TP P Sbjct: 59 MKPRPSTPSSIP 70 >sp|Q41000|ATP4_PEA ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1 Length = 197 Score = 137 bits (343), Expect = 1e-031 Identities = 68/85 (80%), Positives = 74/85 (87%) Frame = +3 Query: 315 TKLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK 494 TKLTVNFVLPY+S+L+AKEVD VIIPA+TG+MGVLPGHVATIAELKPGVL+V EG D TK Sbjct: 65 TKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTK 124 Query: 495 YFVSSGFAFIHANSYADIICC*GCP 569 YFVSSGF FIHANS ADII P Sbjct: 125 YFVSSGFRFIHANSVADIIAVEAVP 149 Score = 81 bits (199), Expect = 7e-015 Identities = 40/54 (74%), Positives = 48/54 (88%) Frame = +1 Query: 553 AVEAVPIDRVDPSLVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSGLDAALTG 714 AVEAVP++++D LVQKGL EFTQKLNSA+TDLEK EAQIG+DV S L++ALTG Sbjct: 144 AVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALTG 197 Score = 69 bits (166), Expect = 5e-011 Identities = 34/55 (61%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +2 Query: 149 SSLRAARAFSTDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKPRPPTP.LDP 313 S A R FSTDVA P N SF EAW+KV P+IDPPKTPL F+K RPP P P Sbjct: 11 SRASATRRFSTDVA-TPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIP 64 >sp|Q55F42|ATPD_DICDI ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1 Length = 170 Score = 63 bits (151), Expect = 2e-009 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +3 Query: 321 LTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSV-HEGNDVTKY 497 LT + + P+ + K+ +V +P + G GV HV IAELKPGV+ + HE D+ K+ Sbjct: 37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96 Query: 498 FVSSGFAFIHANS 536 F+S GFAF++ ++ Sbjct: 97 FISGGFAFVNPDA 109 >sp|Q9P6R6|ATPD_SCHPO ATP synthase subunit delta, mitochondrial OS=Schizosaccharomyces pombe GN=atp16 PE=2 SV=1 Length = 160 Score = 59 bits (142), Expect = 3e-008 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Frame = +3 Query: 318 KLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSV-HEGNDVTK 494 KL ++ LPY + V V IPA G+MG+L HV I LKPGV+SV E ++ +K Sbjct: 30 KLVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSK 89 Query: 495 YFVSSGFA 518 YF+S GFA Sbjct: 90 YFISGGFA 97 >sp|P56525|ATPD_NEUCR ATP synthase subunit delta, mitochondrial OS=Neurospora crassa GN=atp-16 PE=3 SV=2 Length = 165 Score = 57 bits (137), Expect = 1e-007 Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Frame = +3 Query: 318 KLTVNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTK- 494 K+ ++ LP+ + +++V V IPA +G+MGVL HV +I +LKPG++ V E + K Sbjct: 34 KIKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQ 93 Query: 495 YFVSSGFAFIHANSYADI 548 YF+S GFA + S I Sbjct: 94 YFLSGGFAVVQPGSKLSI 111 >sp|A5GV56|ATPE_SYNR3 ATP synthase epsilon chain OS=Synechococcus sp. (strain RCC307) GN=atpC PE=3 SV=1 Length = 135 Score = 53 bits (126), Expect = 2e-006 Identities = 24/50 (48%), Positives = 34/50 (68%) Frame = +3 Query: 369 EVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFA 518 + D VI+P++TGQ+GVLPGHV+ + L GVL + +GN T + GFA Sbjct: 18 QADEVILPSTTGQLGVLPGHVSLLTALDVGVLRMRDGNQWTAIALMGGFA 67 >sp|Q0BQE9|ATPE_GRABC ATP synthase epsilon chain OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpC PE=3 SV=1 Length = 135 Score = 52 bits (124), Expect = 3e-006 Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Frame = +3 Query: 357 LSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVT-KYFVSSGFAFI 524 L ++ VDMV+IPA+ G++GVLPGH I L+ G + +++ VT + +V+ GFA I Sbjct: 15 LLSRSVDMVVIPAAEGELGVLPGHAPMIVLLQGGTIRLYQNGQVTDRLYVAGGFAEI 71 >sp|Q4FP39|ATPE_PELUB ATP synthase epsilon chain OS=Pelagibacter ubique GN=atpC PE=3 SV=1 Length = 130 Score = 51 bits (120), Expect = 1e-005 Identities = 23/70 (32%), Positives = 39/70 (55%) Frame = +3 Query: 327 VNFVLPYASELSAKEVDMVIIPASTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVS 506 + V P S LS ++V V++PA G+MG+L H++ I+ LKPG++ + + Y+V Sbjct: 7 IEIVNPEKSFLSKEDVTEVVVPAFEGEMGILKDHISIISFLKPGIIKIFSKSGEDNYYVE 66 Query: 507 SGFAFIHANS 536 G N+ Sbjct: 67 DGIVEFKNNN 76 >sp|P80504|ATPO_SOLTU ATP synthase subunit O, mitochondrial (Fragment) OS=Solanum tuberosum PE=1 SV=1 Length = 37 Score = 51 bits (120), Expect = 1e-005 Identities = 20/37 (54%), Positives = 28/37 (75%) Frame = +2 Query: 176 STDVAEAPVGNPSFNEAWKKVIPHIDPPKTPLSFMKP 286 +TD+ V + +F EAWKKV+P++DPPKTP +FM P Sbjct: 1 ATDLQAGYVADSNFTEAWKKVVPNVDPPKTPSAFMXP 37 Database: UniProt/Swiss-Prot Posted date: Thu Apr 23 14:22:33 2009 Number of letters in database: 163,773,382 Number of sequences in database: 462,764 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,947,431,911 Number of Sequences: 462764 Number of Extensions: 24947431911 Number of Successful Extensions: 246995722 Number of sequences better than 0.0: 0 |